Microbacterium caowuchunii: F6J84_10355
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Entry
F6J84_10355 CDS
T07216
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mcaw
Microbacterium caowuchunii
Pathway
mcaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F6J84_10355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaw03019
]
F6J84_10355
03016 Transfer RNA biogenesis [BR:
mcaw03016
]
F6J84_10355
Enzymes [BR:
mcaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F6J84_10355
Messenger RNA biogenesis [BR:
mcaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F6J84_10355
Transfer RNA biogenesis [BR:
mcaw03016
]
Prokaryotic type
tRNA degradation factors
F6J84_10355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_KhpA-B
KH_2
KH_5
Motif
Other DBs
NCBI-ProteinID:
QEW00454
LinkDB
All DBs
Position
complement(2153134..2155392)
Genome browser
AA seq
752 aa
AA seq
DB search
MEGPEITAAEAVLDNGRFGTRTVRFETGRLAQQAQGAVAAYLDEETMLLSATSAGKHPRE
GFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVEGLRNEVQ
IVVTVLSIAPGEFYDALAINAASLSTQISGLPFSGPIAGVRLALMPGHGQHPDQWIAFPK
AEQLQEAVFDLIVAGRVLEDGEVAIMMVEAEATEHSWDLIKAGATKPSEEIVAQGLEAAK
PFLKELVGAQNVVANTAAKEIKQFPVFLPYSQETYDFVAGRAYDKLVPIYQIAEKVARQD
ADDELKEAVKAELLAAVEAGELPAAAASEFSAAYKSVTKKIVRGRILSEGVRMDGRGLAD
IRALDAEVQVIPRVHGSAIFQRGETQILGVTTLNMLKMEQQIDSLSPTTSKRYMHHYNFP
PYSTGETGRVGSPKRREIGHGFLAERALVPVLPSREEFPYAIRQVSEALSSNGSTSMGSV
CASTLSLLNAGVPLRAPVAGIAMGLVSDEVDGQTRYAALTDILGAEDALGDMDFKVAGTS
EFVTAIQLDTKLDGIPSSVLAAALTQARDARLTILNVLNAAIDAPDEMAPTAPRVISVQI
PVDKIGELIGPKGKTINSIQDETGAQISIEEDGTVYIGATDGPSAEAARAQVNAIANPTN
PEVGEQFLGTVVKIATFGAFISLLPGKDGLLHVSEVRKLAGGKRVENVEDVLSVGQKLLV
KITKIDDRGKLSLEPVAEEAAVEAGAEASVDA
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggtccggaaatcactgccgccgaagccgttctcgacaacggccgattcggcacc
cgcaccgttcggttcgaaaccggacggctggcgcagcaggcgcagggcgccgttgccgca
tacctcgacgaggagacgatgctcctctcggccaccagcgccggaaagcacccgcgcgaa
ggcttcgacttcttcccgctgaccgtcgacgtcgaagagcgctcgtacgccgccggcaag
atccccggctcgttcttccgtcgtgagggccgcccctccacggaggcgatcctcgtctgc
cgtctcatcgaccgcccgctgcgcccgtcgttcgtcgaaggcctccgcaacgaggtccag
atcgtcgtcacggtgctctcgatcgcacccggtgagttctacgacgcgctggcgatcaac
gcggcgtcgctgtccacccagatctcgggcctgccgttctccggcccgatcgccggtgtg
cgcctcgcgctcatgcccggccacggtcagcaccccgatcagtggatcgccttcccgaag
gcggagcagctgcaggaggccgtgttcgacctgatcgtcgccggtcgcgtgctggaggac
ggagaggtcgcgatcatgatggtcgaggccgaggccaccgagcacagctgggacctcatc
aaggccggcgcgacgaagccgagcgaagagatcgtcgcccagggcctcgaggccgcgaag
ccgttcctcaaggagctcgtcggcgcccagaacgtcgtcgcgaacaccgcggcgaaggag
atcaagcagttcccggtcttcctgccgtacagccaggagacctacgacttcgtcgccggc
cgtgcctacgacaagctcgtcccgatctaccagatcgccgagaaggtcgcgcgtcaggat
gcggacgacgagctgaaggaggccgtcaaggccgagctgctcgccgctgtggaggccggc
gagctgcccgccgccgccgcgtcggagttcagtgccgcgtacaagtcggtcaccaagaag
atcgtccgcggacgcatcctctccgagggtgtccgcatggacggccgcgggctcgccgac
atccgtgcactcgatgccgaggtccaggtcatcccgcgcgtgcacggttccgccatcttc
cagcgcggcgagacccagatcctgggtgtcaccacgctgaacatgctgaagatggagcag
cagatcgactcgctgagccccaccaccagcaagcggtacatgcaccactacaacttcccg
ccctactcgaccggtgagaccggccgtgtcggcagcccgaagcgtcgcgagatcgggcac
ggcttcctcgccgagcgcgccctcgtgccggtgctgcccagccgcgaggagttcccctac
gcgatccggcaggtttccgaggcgctgagctcgaacggctcgacgtcgatgggctcggtc
tgcgcctcgaccctctcgctgctgaacgccggtgtgccgctgcgcgcaccggtcgccggc
atcgcgatgggtctggtttcggacgaggtcgacggccagacgcgttacgccgcgctgacg
gacatcctcggtgccgaggacgctctcggtgacatggacttcaaggtcgccggtaccagc
gagttcgtcactgcgatccagctcgacacgaagctcgacggcatcccgtcgtcggtgctc
gcggcggcgctgacgcaggcgagggacgcccgcctcaccatcctgaacgtgctcaacgcc
gcgatcgacgctccggacgagatggcgccgacggcgccgcgcgtcatcagcgtgcagatc
ccggtcgacaagatcggcgagctgatcggcccgaagggcaagacgatcaactcgatccag
gatgagaccggcgcgcagatctccatcgaggaggacggcaccgtttacatcggtgcgacc
gacggtccgtcggccgaggccgcccgcgctcaggtgaacgcgatcgccaaccccaccaac
ccggaggtcggcgagcagttcctgggcaccgtcgtgaagatcgcgacgttcggcgcgttc
atctcgctgcttcccggcaaggacggactgctgcacgtcagcgaggtgcgcaagctcgcc
ggcggcaagcgtgtggagaacgtcgaagacgtcctctcggtcggtcagaagctgctggtc
aagatcaccaagatcgacgaccgcggcaagctctccctggagccggtcgccgaagaggcg
gccgtggaggccggtgccgaggcatccgtcgacgcctga
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