Microbacterium caowuchunii: F6J84_10515
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Entry
F6J84_10515 CDS
T07216
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mcaw
Microbacterium caowuchunii
Brite
KEGG Orthology (KO) [BR:
mcaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcaw03016
]
F6J84_10515 (truB)
Enzymes [BR:
mcaw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F6J84_10515 (truB)
Transfer RNA biogenesis [BR:
mcaw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F6J84_10515 (truB)
Prokaryotic type
F6J84_10515 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DUF2244
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QEW00483
LinkDB
All DBs
Position
complement(2188639..2189553)
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AA seq
304 aa
AA seq
DB search
MRDDRPAAPSGILLVDKPGGMTSHDVVARARKALGTRKIGHAGTLDPMATGLLVLGVGPA
TRLLTYLVGLDKTYLATIRLGAATDTDDAEGEVTATAGEGLVAAVTDAAIAAGIAQLTGD
ISQVPSTVSAIKVDGRRAYDRARAGEEVVLKARAVTVSRFDVLAARRTEHLIELDVVVDC
TSGTYIRALARDLGAALGVGGHLSALRRTRIGDFDVAEAVPADAMDAGGLLDAAVVAARV
MTRLDVDEDQARDLRHGKRLLGAGTLAGRGHLAAVDPAGRLVGILERRGADLKSAMNMPP
EESE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacgacaggcctgctgcgccatccgggatcctgctcgtggacaaacccgggggc
atgaccagccacgacgtcgtcgcgcgggcgcgcaaggcgctcggcacgcggaagatcggc
cacgcggggacgctcgacccgatggccaccgggctgctcgtgctcggcgtcggtcccgcc
acccgcctgctgacctacctcgtcggactcgacaagacgtatctcgcgacgatccggctc
ggcgcggccacggacaccgacgacgccgagggggaggtcacggcgacggcgggggagggt
ctcgtggcggccgtcacggatgcggccatcgccgccggcatcgcgcagctgaccggcgac
atctcccaggtccccagcacggtgtccgccataaaggtggacgggcgccgcgcctacgac
cgcgcccgggcgggcgaggaggtcgtcctcaaggcccgcgccgtgaccgtttcccgtttc
gacgtcctcgccgcccgcaggaccgagcacctgatcgagctcgacgtcgtggtcgactgc
acgagcgggacgtacatccgggcgctcgcccgcgacctgggcgcggcgctcggcgtcggc
ggccacctgagcgcgctgcggcgcacgaggatcggcgacttcgacgtggccgaggccgtg
ccggcggacgccatggacgccggcgggctgctcgacgcggcggtcgtcgcggcgcgcgtc
atgacgaggctcgatgtcgacgaggaccaggcgcgcgacctccgtcacggcaagcgtctc
ctcggcgccggcaccctcgccggacgcggccatctcgccgccgtcgaccccgccgggcgg
ctcgtgggcatcctcgagcgccgcggtgcggatctgaagagcgccatgaacatgcctccg
gaggagagcgaatga
DBGET
integrated database retrieval system
