Micromonospora cathayae: PVK37_01380
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Entry
PVK37_01380 CDS
T10286
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcay Micromonospora cathayae
Pathway
mcay03420
Nucleotide excision repair
mcay03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PVK37_01380
03430 Mismatch repair
PVK37_01380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcay03400
]
PVK37_01380
Enzymes [BR:
mcay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PVK37_01380
DNA repair and recombination proteins [BR:
mcay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PVK37_01380
MMR (mismatch excision repair)
Other MMR factors
PVK37_01380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WDZ85146
LinkDB
All DBs
Position
complement(299144..301312)
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AA seq
722 aa
AA seq
DB search
MAVYSADQVLAGLDPEQRSAVTAPAGPVCVLAGAGTGKTRAITSRIAHRALTGAISPRHV
LAVTFTARAAAELRHRLTQLGAGGVQARTFHAAALRQVRYFAPRLLRGRAMPELLDSKVR
LVTLAAARVGLRTDRAAARDLAGEIEWAKSSLVEPGEYVVAAAKALRETPHEPARVAEVF
ATYETVKRAGGVIDFEDVLRAAVWGIEEHPDVAEQVRAQYRHFVVDEYQDVNPLQQRLLE
AWLGGRDDLTVVGDASQTIYSFTGATSAYLVDFPRRHRDATVVRLVRDYRSTPQVVGLAN
AVIGQARGTEARLRLELVGQRPAGPEPDLRIFTDEPAEATAVAARCRQLVAAGTPPREIA
VLFRTNAQSEAYEKALAEAEVPYVVQGAERFFERPEVRQAMVALRSATRSIPGETPLPAA
VVEALAAVAWTPDAPPAGGAARERWEALAALLQLAEEYAATPTVVPIGEAAAVERPVTLA
DFTDELHRRAAQQHVPTVDGVTLASLHSAKGLEWDAVFLVGLAEGTLPTGYAKTAEQVEE
ERRLLYVGITRAREWLWLSYASARSPGGRPRRPSRFLPQFDRSGGGTERAGAGAGPVQRG
ERRRRNLVVSCRVCGATLLAGVDRKLGRCPTCPSDLDDELLERLRDWRQRVAGAQKVPAY
VVFTDATLTALAERRPGRPEELIAIAGIGPRKLGLYGESVLALVGGAAVDDVCSEKSLEN
PS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtggcggtgtactcggcggatcaggtgctggccgggctggaccctgagcaacggtcggcg
gtgaccgcgcccgccgggccggtctgcgtgctggccggcgcgggcaccgggaagacccgg
gcgatcacctcccggatcgcccaccgggcgctgaccggcgcgatctccccccggcacgtg
ctggcggtgaccttcaccgcgcgggccgccgccgagctgcggcaccggctcacccagctc
ggcgcgggcggcgtgcaggcccgcacgttccacgccgccgccctgcgccaggtgcgctac
ttcgcgccccggctgctgcgcgggcgggccatgccggagctgctggacagcaaggtccgg
ctggtcaccctggccgccgcccgggtcggcctgcggaccgaccgggcggccgcccgggac
ctggccggcgagatcgagtgggcgaagtcgtcgctggtcgagccgggggagtacgtggtg
gcggcggcgaaggcgctgcgcgagaccccgcacgagccggcccgggtggccgaggtgttc
gccacgtacgagacggtcaaacgggccggcggggtgatcgacttcgaggacgtgctgcgc
gccgcggtctggggcatcgaggaacacccggacgtcgccgagcaggtccgcgcccagtac
cggcacttcgtggtcgacgagtaccaggacgtcaacccgttgcagcagcggctgctggaa
gcctggctcggcggccgggacgacctgaccgtggtcggcgacgccagccagaccatctac
tcgttcaccggggccacctcggcgtacctggtggacttcccgcgccggcaccgggacgcc
accgtggtccgactggtccgcgactaccgctccacgccccaggtggtggggctggcgaac
gcggtgatcggccaggcccggggcaccgaggcccggctccggctggaactggtcgggcag
cgcccggccggcccggaaccggatctgcggatcttcaccgacgagccggccgaggccacc
gcggtcgccgcgcgctgccggcagctcgtcgccgccggcaccccgccccgggagatcgcc
gtgctgttccgcaccaacgcgcagtccgaggcgtacgagaaggcgctcgccgaggccgag
gtgccgtacgtggtgcagggcgcggagcggttcttcgaacggcccgaggtacggcaggcg
atggtggcgctgcggtccgccacccgctcgatccccggggagaccccgctgccggccgcc
gtggtggaggcgctggccgcggtcgcctggaccccggacgcgcccccggccggcggggcg
gcccgggaacgctgggaggccctcgccgccctgctccagctcgccgaggagtacgcggcc
accccgaccgtggtgccgatcggcgaggcggcggcggtcgagcggccggtcaccctggcc
gacttcaccgacgagctgcaccggcgggccgcccagcagcacgtgcccacggtcgacggg
gtcaccctggcctccctgcactccgcgaagggcctggagtgggacgccgtcttcctggtc
gggctcgccgaggggacgctgcccaccggctacgcgaagaccgccgagcaggtggaggag
gaacggcggctgctctacgtcgggatcacccgggcccgggagtggctgtggctgtcgtac
gcctcggcccggtccccgggcgggcggccccggcggccgtcgcggttcctgccgcagttc
gaccgctccggcggcggcaccgagcgggccggggccggggccggcccggtccagcggggc
gagcgacggcgacgcaacctggtggtctcctgccgggtctgcggggcgaccctgctcgcc
ggggtcgaccgcaagctcggccgctgcccgacctgcccgtccgacctcgacgacgagctg
ctggagcggctgcgggactggcggcagcgggtggccggggcgcagaaggtccccgcgtac
gtggtgttcaccgacgcgaccctgaccgcgctggccgagcggcgacccggtcgccccgag
gaattgatcgccatcgccggtatcggcccccgcaagctgggcctctacggcgagtccgtg
ctggccctggtgggtggcgcggcggtggacgacgtctgctcagagaaaagtttggaaaac
ccgtcgtaa
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