Micromonospora cathayae: PVK37_01460
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Entry
PVK37_01460 CDS
T10286
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcay Micromonospora cathayae
Pathway
mcay03420
Nucleotide excision repair
mcay03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PVK37_01460
03430 Mismatch repair
PVK37_01460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcay03400
]
PVK37_01460
Enzymes [BR:
mcay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PVK37_01460
DNA repair and recombination proteins [BR:
mcay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PVK37_01460
MMR (mismatch excision repair)
Other MMR factors
PVK37_01460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Herpes_US12
Motif
Other DBs
NCBI-ProteinID:
WDZ85162
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All DBs
Position
complement(315676..319143)
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AA seq
1155 aa
AA seq
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MTQPALFGATTAPTPRTADAGPRYTPVELAKLLQRPAPTREQAAIIAGPVEPLLVVAGAG
SGKTETMAARVVWLVANQHVRPEQILGLTFTRKAAGELAHRVRTRLDQLIRRLGRPGRDP
ADDPLAGEPTVATYHSYAARIVTEHGLRAGYEPSTRLLTEASRWQLVDLLVRNHDGDLSE
LQRMPSTVTDAVLALAAELDEHLVDPDDLSAWTGRFFHEVQSRPGKVYADVRKALAVQQT
RLRLLPLVRAYAERKADFEAMDFADQLARAARVARDHPEVGRIERDRYRVVLLDEYQDTS
HAQVVLLHSLFGGGHPVTAVGDPCQSIYGWRGASAGTLERFPEQFTRADGGPARVLGLTT
SWRNRPEILAVANALATPLRAAGARVPELRAALTVADPIPHRTPGGLAGGTVHCALLPTY
ADEAEWIADSVLNAWRGAARMPGALPEHIPVPQRPTTAVLVRVRSQIPAIESALRARGLP
VDVVGLGGLLDTPEVRDVVCTLRVLADPTDGAALLRLLTGARWRIGPRDLVALHRRARQL
ATARRKLGAAGEVPEGVDVLDEATLVEALADLGPAQTYSAEGYTRLRAYADELALLRYRL
DQSLPELVADVERTIGLDVEVAVRAGRDGTGDAGLARGHLDALGDVAARFGGETPGATLA
GFLAFLAAAEDEERGLTPGEVEVVEGAVQVLTAHAAKGLEWDVVAVAGLTRGGWPGQVRS
SDHYLGGLGVLPFPLRGDADGLPDLALAGADDQRAVARALADFVDDWRAHDEREERRLAY
VAVTRPRRLLLCSGYWWGEGTKRPRGPSVFLREVHDACLDAGDGQVVDVWSPEPAGDAVN
PTTEVVLRAEWPADPLGVRRPVLAEAAALVRQLLITDGPVPAAAAGPDDATGPAAAAGGA
EQEPAVDDADDDPEVARWRRETDLLLAERAEALRGAGPVEVILPTHLSVSQLVTLRRDPA
ELARTLRRPLPTPPNPYARRGTAFHTWLEQRYGVDRLLDVDELPGAADADAAPDTELLAL
QARFLASEWADRVPVEVEVPFATVIAQVVVRGRMDAVFARPGCRYDVVDWKTGRQPTGVE
ADAAAVQLAVYRLAWAELAGVPVEHVGAAFHYVRDGVTVRPTDLLDVDGLTALVAGATAE
PADGTPRGVSPAGDP
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagcccgcgctgttcggcgccaccaccgcaccgaccccgcgtaccgccgacgcc
ggcccccggtacacgccggttgagctggcgaagctgctccagcggccggcacccacccgg
gagcaggcggccatcatcgccgggccggtcgagccgctgctggtggtggcgggcgcgggc
tccggcaagaccgagacgatggccgcccgggtggtctggctggtcgccaaccagcacgtc
cggccggaacagatcctcggcctcaccttcacccgcaaggccgccggtgagctggcccac
cgggtacgcacccggctcgaccagctgatccgccggctcggccggcccggtcgggatccg
gccgacgatccgctggccggtgagccgaccgtcgccacctaccactcgtacgcggcccgg
atcgtcaccgagcacgggctgcgcgccggctacgaaccctccacccggctgctcaccgag
gcgtcccgctggcagttggtggacctgctggtccgcaaccacgacggtgacctgtccgag
ctgcaacggatgcccagcacggtcaccgacgcggtgctggcgctcgccgccgagctggac
gagcacctggtcgacccggacgacctgtccgcctggaccggccggttcttccacgaggtg
cagtcccgccccggcaaggtgtacgcggacgtgcgcaaggcgctcgccgtgcagcagacc
cggctgcggctgcttccgctggtccgggcgtacgccgagcgcaaggcggacttcgaggcg
atggacttcgccgaccagctggcccgcgccgcccgggtggcccgggaccatccggaggtc
ggccggatcgaacgggaccggtaccgggtggtgctgctggacgagtaccaggacaccagc
cacgcgcaggtggtgctgctgcactcgctgttcggcggcggccatccggtcaccgcggtc
ggtgacccctgccagtcgatctacgggtggcggggggcgagcgccggcaccctggaacgt
ttcccggagcagttcacccgggccgacggcgggccggcccgggtgctggggctcaccacc
agttggcgtaaccgcccggagatcctggcggtggcgaacgcgctggcgactccgttgcgg
gcggccggggcgcgggtgccggagctgcgcgccgcgctgaccgtcgccgacccgatcccg
caccgcaccccgggcgggctggccggcggcaccgtgcactgtgcgctgctgcccacgtac
gccgacgaggcggagtggatcgccgacagcgtgctgaacgcgtggcgcggggcggcccgg
atgccgggcgcgctgcccgagcacattccggtgccgcagcgccccaccaccgccgtgctg
gtccgggtacgcagccagatcccggcgatcgagtcggcgctgcgggcccgggggctgccg
gtcgacgtggtcggcctgggcgggctgctggacaccccggaggtccgggacgtggtgtgc
acgctgcgggtgctcgccgacccgaccgacggggcggcgctgcttcggctgctcaccggg
gcccgttggcggatcggtccccgggacctggtggccctgcaccggcgggcccggcaactc
gccaccgcccggcggaagctgggggccgccggtgaggtgccggagggcgtggacgtcctg
gacgaggcgaccctggtcgaggcgctggccgacctcgggccggcgcagacgtactcggcg
gaggggtacacccggctccgggcgtacgcggacgagctggccctgctccggtaccggctg
gaccagtccctgccggagctggtcgcggacgtcgaacggaccatcggcctggacgtggag
gtggccgtgcgggccggtcgggacggcaccggcgacgccggtctggcccggggccacctg
gacgccctcggcgacgtggcggcccggttcggcggggagacgccgggcgcgacgctggcc
ggtttcctggccttcctggccgccgccgaggacgaggaacgcgggttgacccccggcgag
gtcgaggtggtggagggcgcggtgcaggtgctcaccgcgcacgccgccaaggggctggag
tgggacgtggtggcggtcgccgggctgacccggggcgggtggccgggccaggtccgctcc
tccgaccactatctgggcgggctgggtgtgctgcccttcccgctgcgcggggacgccgac
ggcctgccggacctggccctggccggggcggacgaccagcgtgcggtggcccgggcgctg
gccgacttcgtcgacgactggcgggcgcacgacgagcgggaggaacggcggctggcgtac
gtggcggtgacccggccccggcggctgctgctctgctccggctactggtggggggagggg
acgaaacgtccgcgcggtccctcggtgttcctgcgtgaggtgcacgacgcctgcctggac
gcgggcgacgggcaggtggtggacgtctggtcgccggagccggccggcgacgcggtcaac
ccgaccaccgaggtggtgttgcgtgccgagtggccggccgatccgctgggggtacgccgg
ccggtgctggccgaggcggcggccctggtccggcagctcctgatcaccgacgggccggtc
ccggccgcagccgccggcccggacgacgccaccggcccggctgcggcggccggcggtgcg
gagcaggagccggcggtggacgacgccgacgacgatccggaggtggcccgttggcggcgg
gagaccgacctgctgttggccgagcgggccgaggcgttgcgcggggccggtccggtcgag
gtgatcctgcccacccacctgtcggtctcccagctcgtcacgctgcgccgggacccggcg
gaactggcccgtacgctgcgccggccgttgcccaccccacccaacccgtacgcccgccgg
ggcaccgccttccacacctggctggagcagcggtacggggtggaccggctgctcgacgtg
gacgagttgcccggtgccgccgacgccgacgccgccccggacaccgaactgctcgccctc
caggcgcgcttcctggccagcgagtgggccgaccgggtgccggtggaggtggaggtgccg
ttcgccacggtgatcgcgcaggtggtggtccggggccggatggacgcggtcttcgcccgc
cccggctgccggtacgacgtggtcgactggaagaccggccggcagccgaccggggtggag
gccgacgcggcggcggtgcagttggccgtctaccggctggcctgggcggagctggccggg
gtgccggtggagcacgtcggggcggcgttccactacgtccgggacggggtgaccgtccgc
ccgacggacctgctggacgtcgacgggttgaccgcgctggtggccggggcgacggcggag
ccggcggacgggacgccccggggagtgtcgccggcaggggatccgtga
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