Micromonospora cathayae: PVK37_17095
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Entry
PVK37_17095 CDS
T10286
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mcay Micromonospora cathayae
Pathway
mcay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVK37_17095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcay03019
]
PVK37_17095
03400 DNA repair and recombination proteins [BR:
mcay03400
]
PVK37_17095
Enzymes [BR:
mcay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PVK37_17095
Messenger RNA biogenesis [BR:
mcay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PVK37_17095
DNA repair and recombination proteins [BR:
mcay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PVK37_17095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
HRDC
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
WDZ82221
LinkDB
All DBs
Position
complement(3725899..3727536)
Genome browser
AA seq
545 aa
AA seq
DB search
MRRATDTTALRRAARDLFGWDELRPNQLAAMRAVMKRRDALVVLPTGAGKSAIYQIPASL
IPGCTVVISPLLALQHDQIESLNERRRPELRAVRISSDETPAQQAEALAAVRAGRAEFLF
ITPEQLSNPDRLAEVRALEPALVAIDEAHCISAWGHDFRPDYLALGHLIEGLGRPPVVAL
TATASPPVRDDIVARLRLTDPELVLSGLDRPNLFLEVAHCPTEDYRWRRLVALLRDDKRP
GIIYVPTRRSAEELAERLTGAGYPAQFYHGGMSAGARGELHRAFLDDQVPIMVATSAFGM
GIDKPNIAWVVHMALPDSPDSYFQEIGRAGRDGGAARVLLLWQAEDVGLQRYFSGGLPDE
RQLHELAALLRAKPVSRRQLRELTGLGPRKLGQYLALLEQIGAAVPRGRQRIGVPRYAPM
PVEAARAALAEAERQQTVTRSRTDMMRAFAETTGCRGQTLLAYFGEQMTEVCGHCDNCHA
GTSVAVAETADDAPFPVHSQVRHPEWGAGMVLNYEEDRMTVLFDDVGYKTLSVPVVSGQA
LLTLV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagacgagccacggacaccacagccctgcgccgcgcggcgcgtgacctcttcggttgg
gacgaactgcgccccaaccagctcgccgcgatgcgggcggtgatgaagcggcgggacgcg
ctggtggtgctgcccaccggggcggggaagtccgccatctaccagatcccggcgagcctc
atccccggctgcacggtggtgatctccccgctgctggccctgcagcacgaccagatcgag
tcgctgaacgaacggcgtcgccccgagctgcgcgcggtgcggatcagctccgacgagacc
cccgcccagcaggccgaggcgctcgcggccgtccgggccggccgggcggagttcctgttc
atcacgccggagcagttgagcaacccggaccggctggccgaggtgcgcgcgctcgaaccg
gcgctggtggcgatcgacgaggcgcactgcatctccgcctgggggcacgacttccgcccc
gactacctggccctggggcacctgatcgagggcctgggccggcccccggtggtggcgttg
accgccaccgcgtcgccgccggtccgcgacgacatcgtcgcccggctccggctgaccgac
ccggagctggtgctctccgggctggaccggccgaacctcttcctcgaggtcgcgcactgt
cccaccgaggactaccgctggcggcggctggtcgcgctgctgcgcgacgacaaacggccg
ggcatcatctacgtacccacccgacggtcggccgaggagctggcggaacggctcaccggg
gccggttacccggcgcagttctaccacgggggcatgtcggccggggcgcgcggcgagctg
caccgggccttcctcgacgaccaggttccgatcatggtggcgacctcggcgttcggcatg
ggcatcgacaagcccaacatcgcctgggtggtgcacatggcgctgcccgactcgccggac
agctacttccaggagatcggccgggccggtcgggacggcggggcggcccgggtgctgctg
ctctggcaggccgaggacgtcggcctgcaacgctacttctccggcggactgccggacgaa
cggcagttgcacgagctggccgcgctgctgcgcgcgaaaccggtcagccgccggcaactg
cgggagctgaccgggctcggcccccgcaagctcggccagtatctcgccctgctggagcag
atcggtgccgccgtaccccggggccggcagcggatcggggtgccccggtacgccccgatg
ccggtggaggccgcgcgggcggccctggccgaggcggaacggcagcagaccgtcacccgg
tcccggaccgacatgatgcgcgcgttcgccgagaccaccggctgccgggggcagaccctg
ctggcgtacttcggggagcagatgaccgaggtctgcgggcactgcgacaactgccacgcc
ggcaccagcgtcgccgtcgcggagaccgccgacgacgcccccttccccgtacacagccag
gtccgccacccggagtggggcgccggcatggtgctcaactacgaggaggaccggatgacg
gttctgttcgacgatgtcgggtacaagacgctgtccgtgcccgtggtgagtgggcaggcg
ttgctgacgctggtctag
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