Micromonospora cathayae: PVK37_19250
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Entry
PVK37_19250 CDS
T10286
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
mcay Micromonospora cathayae
Brite
KEGG Orthology (KO) [BR:
mcay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcay03019
]
PVK37_19250
Enzymes [BR:
mcay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PVK37_19250
Messenger RNA biogenesis [BR:
mcay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PVK37_19250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
MTR4-like_stalk
DEXQc_Suv3
AAA_22
MTR4_beta-barrel
Motif
Other DBs
NCBI-ProteinID:
WDZ82608
UniProt:
A0ABY7ZJC8
LinkDB
All DBs
Position
4200332..4203118
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AA seq
928 aa
AA seq
DB search
MSSPAERYAAARRRAAQASLFPALDEFALDLGFDLDDFQREACQALERGSGVLVCAPTGA
GKTVVGEFAVHLALRGTPARPADADAPRRKCFYTTPIKALSNQKYHDLVDRYGAEQVGLL
TGDNAINGDAPVVVMTTEVLRNMLYAGSATLEGLAYVVMDEVHYLADRFRGGVWEEVIIH
LPESVTLVSLSATVSNAEEFADWLVTVRGETAVVVSEHRPVPLWQHMLVGKRMFDLFHDA
DAARKHDVHPELLRYTRDTLRRLELGEGRSAGPGGGRRGPRWRGPLRPDIVDRLDREGLL
PAILFIFSRAGCAAAVQQCLAAGLRLTSPEERAEIRRVVESRVTAIPGEDLTVLGYWEWL
DGLERGLAAHHAGMLPAFKEVVEELFVRGLVKAVFATETLALGINMPARCVVLERLVKYN
GEAHVDLTPGEYTQLTGRAGRRGIDVEGHAVVVWSPETDPRHVAGLASTRTYPLRSSFRP
SYNMAVNLVGTVGAEPARELLESSFAQFQADRSVVGLARQVQRNTETIEAYGAEAACHHG
DFDEYFALRVAIGDRERAIARQGQTQRKAAAVAALERLRVGDVIRVPSGRRAGLAVVLDP
ATGGFGEPRPLVLTQDRWAGRISPGDFTTPAEVLARIRVPKHFNHRSPAARRDLAAEVAG
TGLDRHGGRRGGRSRQAAGEDRQLTQLRSELRRHPCHACPEREEHARWAERRRRLERDTD
ELRQRVAGRTGSLARTFDRIVALLTARGYLGADGAVTDAGRMLGRIWTEADLLVAECLRR
GVWDGLSPAELAAAVSVVVFEARRDVDERASVPRGPVADAVDATLKLWSEIESDEAARGL
SVTREPDLGFVWPIYRWARGEALAKVLGSGHELDGEMPAGDFVRWARQVVDLLGQLADSG
GASTELRATARQAIGAVNRGVLAYHTTG
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccccgccgagcggtacgccgcggcgcgccgccgggccgcgcaggcctccctc
ttcccggctcttgacgagttcgccctcgacctggggttcgacctcgacgacttccaacgc
gaggcgtgccaggccctggaacggggcagcggggtgctggtctgcgccccgaccggggcc
ggcaagaccgtggtcggcgagttcgccgtacacctggccctgcgcggcaccccggcgcgg
ccggcggacgccgacgcgccccgccgtaagtgcttctacaccacgccgatcaaggcgctg
tcgaaccagaagtaccacgacctggtcgaccggtacggggccgagcaggtcgggctgctc
accggcgacaacgcgatcaacggcgacgcgccggtggtggtgatgaccaccgaggtgctg
cggaacatgctctacgccggctcggccaccctcgagggcctggcgtacgtggtgatggac
gaggtgcactacctcgccgaccggttccggggcggggtctgggaagaggtgatcatccac
ctgcccgaatcggtgaccctggtctccctctcggcgaccgtctccaacgccgaggagttc
gccgactggctggtcaccgtgcgcggcgagaccgccgtggtggtcagcgagcaccggccg
gtgccgctgtggcagcacatgctggtcggcaagcgcatgttcgacctgttccacgacgcc
gacgcggcccgcaaacacgacgtgcaccccgagctgctccgctacacccgggacaccctg
cgtcgcctggaactgggggaggggcgcagcgccggccccggcggcggacggcgtggcccg
cgctggcgggggccgctgcggccggacatcgtcgaccggctcgaccgggagggcctgctc
ccggcgatcctgttcatcttcagccgggccggctgcgccgccgccgtccagcagtgcctg
gccgccgggctgcggctgacgtccccggaggaacgcgccgagatccgccgggtggtcgag
tcccgggtcaccgccatccccggcgaggacctgaccgtgctcggctactgggagtggctc
gacggcctggagcgcgggctggccgcccaccacgcgggcatgctgccggccttcaaggag
gtcgtcgaggagctgttcgtgcggggcctggtcaaggcggtgttcgccaccgagaccctg
gcgctgggcatcaacatgccggcccgctgcgtggtgctggaacggctcgtcaagtacaac
ggcgaggcccacgtcgacctgaccccgggggagtacacgcagctcaccggccgggccggc
cgtcggggcatcgacgtcgaggggcacgccgtggtggtctggtcgccggagaccgacccc
cggcacgtggccgggctggcgtcgacccgcacctatccgctgcggtccagcttccggccg
tcgtacaacatggcggtcaacctggtcggcacggtcggcgcggaaccggcccgggagctg
ctggagtcgtcgttcgcgcagttccaggcggaccggtcggtggtcgggctggcccggcag
gtgcagcgcaacaccgagaccatcgaggcgtacggcgcggaggcggcctgccaccacggc
gacttcgacgagtacttcgcgctgcgggtggcgatcggcgaccgggaacgggccatcgcc
cggcaggggcagacccagcgcaaggcggcggccgtcgccgccctggagcggctgcgggtc
ggtgacgtgatccgggtgccgtccgggcggcgggccgggctggccgtggtgctcgacccg
gccaccggtggcttcggcgaaccgcgtccgctggtgctcacccaggaccgctgggccggg
cggatcagtcccggggacttcaccacgccggccgaggtgctggcccggatccgggtgccg
aagcacttcaaccaccgctccccggccgcccggcgggacctcgcggccgaggtcgccggc
actggactggaccgccacggcggccggcgcggtggccggtcccggcaggccgccggcgag
gaccggcagctcacccagctccgctccgagctgcgccggcacccctgccacgcctgcccg
gagcgggaggaacacgcccgctgggcggagcgccgccggcggctcgaacgcgacaccgac
gagctgcggcagcgggtggccgggcggaccggctcgctggcgcgcaccttcgaccggatc
gtcgcgctgctcaccgcgcgcggctacctgggcgccgacggtgcggtcaccgacgccggc
cggatgctgggccggatctggaccgaggcggacctgctggtcgccgagtgcctgcgccgg
ggcgtctgggacgggctctccccggccgagctggccgccgccgtgtcggtggtggtcttc
gaggcccggcgggacgtcgacgagcgggcgtcggtgccgcgtggtccggtcgccgacgcg
gtcgacgccacgctgaagctgtggagcgagatcgagtcggacgaggcggcccgggggctc
agcgtcacccgggagccggacctgggcttcgtctggccgatctaccggtgggcccggggc
gaggcgctggcgaaggtgctcggcagcggccacgagctggacggcgagatgccggccggg
gacttcgtccgctgggcgcgtcaggtggtcgacctgctcgggcagctcgccgactccggc
ggggcgtcgaccgagctgcgcgccaccgcccggcaggccatcggtgccgtcaaccggggc
gtcctggcgtatcacaccaccggttga
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