Micromonospora cathayae: PVK37_22485
Help
Entry
PVK37_22485 CDS
T10286
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mcay Micromonospora cathayae
Brite
KEGG Orthology (KO) [BR:
mcay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcay03016
]
PVK37_22485
Enzymes [BR:
mcay01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
PVK37_22485
Transfer RNA biogenesis [BR:
mcay03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
PVK37_22485
Prokaryotic type
tRNA splicing ligases
PVK37_22485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WDZ83208
UniProt:
A0ABY7ZL09
LinkDB
All DBs
Position
complement(5006545..5007963)
Genome browser
AA seq
472 aa
AA seq
DB search
MELVEETPYRFRIDRRDPMRVPGVVFAARPLLPDLGEDRSLDQVANVATLPGIVDAAYAM
PDIHWGYGFPIGGVAATDTAAGGVVSPGGVGFDISCGVRLLAADLDRAEFPRLCGALMDG
LDAAIPRGMGRGAVWQLADRAELDAVLRGGSRYAVERGHGVVRDLDRCEDGGAVDDADPT
QVSERAVQRGRGQVGSLGSGNHFLEVQAVSEVYDEPVATAFGLRAGQVCLMVHSGSRGLG
HQICTDHVRAMEHAMPRYGITVPDRQLACAPVDSAPGRAYLGAMAAAANYARANRQLLAE
AARRVFTRVAGCRLDLVYDVSHNLAKIEDHPLDGVDRRLCVHRKGATRAFPPGHPDLPDD
LRPVGQPVLIPGSMGTASYVLTGVPGAPAFASTCHGAGRTRSRRQATTTVRGQDLRRDLA
ARGIAVRGASWRGLAEEMPGAYKDVAAVVDVAEAAGLGRRVARLVPLGVVKG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtggagctggtggaggagacgccgtaccggttccggatcgaccggcgcgatccgatgcgg
gtacccggagtggtgttcgccgcccgtccgctcctgcccgacctgggcgaggaccggtcc
ctggaccaggtggcgaacgtggcgaccctgcccggcatcgtcgacgccgcgtacgccatg
cccgacatccactgggggtacggcttcccgatcggcggggtggccgccacggacaccgcc
gccggcggggtggtctcaccgggcggggtcgggttcgacatctcctgcggggtgcggctg
ctcgccgccgacctggaccgcgccgagttcccccggctgtgcggggcgttgatggacggc
ctggacgcggcgatcccccggggcatgggacggggcgcggtctggcagctcgccgaccgc
gccgagctggacgcggtgctgcgcggcggttcccgctacgccgtcgagcggggccacggc
gtcgtccgggacctggaccgctgcgaggacggcggcgcggtcgacgacgccgacccgacg
caggtcagcgaacgggcggtacagcgcggccggggccaggtgggcagcctcggttccggc
aaccacttcctggaggtccaggccgtctccgaggtgtacgacgagccggtggcgaccgcg
ttcgggctgcgcgccgggcaggtctgcctgatggtgcacagcggctcgcggggactgggc
caccagatctgcaccgaccatgtccgcgccatggaacacgccatgccccggtacggcatc
acggtgccggaccgccagttggcctgcgcgccggtggactccgcacccggccgggcgtac
ctgggggcgatggccgccgccgccaactacgcccgcgccaaccggcagctgctcgccgag
gcggcccgccgggtgttcacccgggtcgccggctgccgcctcgacctggtctacgacgtc
tcgcacaacctcgccaagatcgaggaccatccgctcgacggggtggaccgccggctgtgc
gtacaccgcaagggcgccacccgggcgttcccaccgggccaccccgacctccccgacgac
ctgcgtccggtcgggcagccggtgctgatccccggttcgatgggcaccgcctcgtacgtg
ctgaccggggtacccggcgcgcccgcgttcgcgtccacctgccacggggccggccggacc
cgcagccgccggcaggccaccaccacggtgcgggggcaggacctgcggcgggacctggcg
gcccggggcatcgcggtgcgcggtgcgtcctggcgtggcctggccgaggagatgccgggg
gcgtacaaggacgtcgccgcggtggtcgacgtggccgaggccgccggcctgggccgccgg
gtcgcccggctggtcccgttgggcgtggtcaagggctga
DBGET
integrated database retrieval system
