Micromonospora cathayae: PVK37_27790
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Entry
PVK37_27790 CDS
T10286
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mcay Micromonospora cathayae
Pathway
mcay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVK37_27790 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcay03019
]
PVK37_27790 (recQ)
03400 DNA repair and recombination proteins [BR:
mcay03400
]
PVK37_27790 (recQ)
Enzymes [BR:
mcay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PVK37_27790 (recQ)
Messenger RNA biogenesis [BR:
mcay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PVK37_27790 (recQ)
DNA repair and recombination proteins [BR:
mcay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PVK37_27790 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Tuberculin
Motif
Other DBs
NCBI-ProteinID:
WDZ84220
LinkDB
All DBs
Position
6323912..6325759
Genome browser
AA seq
615 aa
AA seq
DB search
MDSPTALRTETPLDVLRRVFGYDSFRGFQQEIVTHVVGGGDALVLMPTGGGKSLCYQIPA
LLRDGVAVVVSPLIALMQDQVDALRAVGVRAGFLNSTLDPDTRRLVEAEFVAGEIDLLYL
APEALGTRATLNLLDRGRIALFAIDEAHCVSQWGHDFRPDYLTLSMLHERWPGVPRIALT
ATATSATRQEIATRLQLTEARHFVASFDRPNIQYRIVPKREPRKQLLSLLRDEHPGDAGI
VYCLSRASVDKTAEFLVQHGVAALPYHAGLDAATRAANQQRFLREDGLVMVATIAFGMGI
DKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIDTSEGDAA
HRRNLAAHLDAMLALCETVRCRRAQLLEYFGQPAGGEGCGNCDTCLSPPESWDGTVAAQK
LLSTVYRLDRERNQRFGAGHCIDILLGRSNDKIVQHRHDSLSTFGIGSDLREAEWRGVVR
QLLAEGLLAVEGDYGTLALTDASAEVLGRRRTVMMRREPERPASTGGRTSRTGKSAAPAV
ELSPEAAPLFERLRAWRAATAKEQGVPAYVIFHDATLRQIAADAPASLGALSGISGVGEN
KLAKYGDQILAVLTE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggactcccccaccgcgctgcgcaccgagactcccctggacgtgctgcggcgggtgttc
gggtacgactcgttccggggcttccagcaggagatcgtgacacacgtcgtgggcggcggc
gacgcgctggtgctgatgccgaccggtggtggcaagtcgctgtgctaccagatcccggcg
ctgctgcgtgacggggtggcggtggtggtctcgccgctgatcgcgctgatgcaggaccag
gtggacgcgctgcgcgcggtcggggtccgcgccggcttcctgaactccaccctcgacccg
gacacccgccgactggtcgaggcggagttcgtggccggcgagatcgacctgctctacctg
gcacccgaggcgctcggcacccgggccaccctgaacctgctcgaccggggccggatcgcc
ctgttcgccatcgacgaggcgcactgcgtctcgcagtgggggcacgacttccgccccgac
tacctgaccctgtcgatgctgcacgaacgctggcccggggtgccgcgcatcgcgctcacc
gccaccgccacctcggcgacccggcaggagatcgccacccggctccagctcaccgaggcc
cggcacttcgtggccagcttcgaccggcccaacatccagtaccggatcgtgccgaagcgc
gagccgcgcaagcaactgctgagcctgctgcgcgacgagcatcccggcgacgccggcatc
gtctactgcctgtcccgggcgtcggtcgacaagaccgccgagttcctcgtccagcacggt
gtcgccgcgctgccgtaccacgcgggcctggacgcggccacccgcgccgccaaccagcag
cggttcctgcgggaggacggcctggtgatggtggcgaccatcgcgttcgggatgggcatc
gacaagcccgacgtccggttcgtcgcccacctggacctaccgaagtcggtggagggctac
taccaggagaccggccgggccggacgggacggcctgccgtcgaccgcctggctggcgtac
gggctccaggacgtggtgcagcaacgcaagatgatcgacacctcggagggcgacgccgcg
caccggcggaacctggccgcccacctggacgcgatgctcgccctctgtgagacggtgcgc
tgccggcgggcgcaactgctggagtacttcggccagccggcgggcggtgagggctgcggg
aactgcgacacctgcctgagcccgccggagtcgtgggacggcacggtcgccgcgcagaag
ctgctctccacggtgtaccggctggaccgggaacgtaaccagcggttcggcgcggggcac
tgcatcgacatcctgctcggccgcagcaacgacaagatcgtccagcaccggcacgactcg
ttgagcacgttcggcatcggcagcgacctgcgggaagcggagtggcggggcgtggtgcgc
caactcctcgccgaagggctgctagcggtcgagggcgactacggcaccctggcgttgacc
gacgccagtgccgaggtgctgggccgccgccggacggtgatgatgcgccgcgaaccggaa
cgcccggcgtcgaccggcggccggacgtcgaggacgggtaagtccgccgcccccgccgtc
gagctgtcgccggaggccgcgccgctgttcgagcggctgcgggcctggcgcgcggcgacc
gccaaggagcagggcgtacccgcgtacgtgatcttccacgacgcgacgctgcggcagatc
gccgccgacgcgccggcttcgttgggcgcgctgtccgggatcagtggcgtcggggagaac
aagctcgccaagtacggcgaccagatcctcgccgtcctcaccgagtaa
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