Micromonospora cathayae: PVK37_31195
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Entry
PVK37_31195 CDS
T10286
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mcay Micromonospora cathayae
Pathway
mcay03018
RNA degradation
Brite
Enzymes [BR:
mcay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
PVK37_31195
Messenger RNA biogenesis [BR:
mcay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PVK37_31195
Ribosome biogenesis [BR:
mcay03009
]
Prokaryotic type
rRNA processing factors
PVK37_31195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WDZ84833
LinkDB
All DBs
Position
complement(7092622..7095753)
Genome browser
AA seq
1043 aa
AA seq
DB search
MLENEPEGGERTGTQPAGETAETTDTPVAAPTRRRTTRRKAAPLNQPEQTEAPVDASVGT
ASASAEPLQGEVLAPVAGDLEAAPKTTRRRRKATAPKATEEPVVAAEVVPTTDEVVPPVK
VTRTRRKKAAAPAAEPAPEATAPAAEPVPPVIETTETTTVEVTPPGAGEVVAVEETVPVD
QPTPTAAGPTPPAESAPAGESAQVAAGPAAEAAPVRATRGRTRRQTPAASGAENRSGEVP
PGVAVPGPTDQAAAPAAEADVAAPAEEKPASRRRRAALTAPTVLFMAPVPEALPPARVTP
PAEEPAAVEEPPVVEEPAETTRRRRRARREPEPVEVETEPEEEPEAEAEDEAAEHEDEDD
DTAAGRRRRRRGRRGRGRGKGGADEADDEESEETAQAEEEPEAEADEEEDEGGDGLTRRR
RRRRRRGSGDVEATTDDGVPTVVKIREPRKTVDEVQGVSGSTRLEAKRQRRRDGREQRRT
RPPILSESEFLARREAVDRVMVVRQRGDRTQIGVLEDGVLVEHYVTRNSAGTMAGNVYLG
KVQNVLPSMEAAFVDVGRGRNAVLYAGEVNWDTTGLEGRARSIEQALKSGDSVLVQVTKD
PIGHKGARLTSHIALSGRHLVYVPNGNASGISRKLPDTERKRLRDVLKKLVPDGAGVIVR
TAAEGASEDELARDVKRLQAQWEDIQAKATEGGAPVLLYEEPDLVIRVVRDLFNEDFREL
VIEGEGAYGLVESYLSHVSPDLVERLRRHVGTSDVFAEYRIDEQILKGLDRKVFLPSGGH
LVIDRTEAMTVVDVNTGKYTGAGGNLEETVTRNNLEAAEEIVRQLRLRDIGGIVVIDFID
MVLESNRELVLRRLTECLGRDRTKHQVTEITSLGLVQMTRKRIGAGLLEAFSETCECCKG
RGLIIHTEPVPEKPRGGAGEKTKVVAAAAAPAPPAPTEQNGTSSRRRARRSAAPERSTVE
VEVAETPTETEYHDTMGYDLSRYETDTAAAPAVADAQRGESARLAAADDPDALVDGETDD
ELAEAGGGRRRSRRGGARRRTRP
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagaacgagcccgagggcggcgaacggaccggcacacagccggccggtgagacc
gccgagaccactgacaccccggtggccgcgccgacgcgtcggcggaccacccggcgcaag
gccgcgccgctcaaccaaccggaacagaccgaggcgcccgtggacgcgtcggtcggcacc
gcgtcagccagcgcggagcccctccagggggaggtgctcgccccggtagccggtgacctg
gaggccgccccgaagaccacccgccgccggcgcaaggcgaccgccccgaaggcgaccgag
gaaccggtcgtcgcggccgaggtggtaccgaccaccgacgaggtcgtaccgccggtcaag
gtgacccggacccgccggaagaaggccgccgccccggccgccgagccggctccggaggcg
accgccccggccgccgaacccgtcccgccggtgatcgagaccaccgagaccaccaccgtg
gaggtcaccccgccgggtgccggcgaggtggtggcggtcgaggagaccgtcccggtggac
cagccgaccccgaccgcggccggaccgaccccgccggcggagtccgcgccggccggcgaa
tcagcgcaggtggcggccggaccggccgccgaggccgcgccggtacgggcgacgcgcggg
cggacccgacggcagaccccggcggcgagcggggccgagaaccgctccggtgaggtcccg
ccgggcgtcgccgtacccggcccgaccgaccaggccgccgcgccggccgccgaggcggac
gtggccgcgccggccgaggagaagccggccagccgccgccgtcgggccgcgctgaccgcg
ccgaccgtgctgttcatggccccggtgccggaggcgctgccgccggcccgggtgaccccg
ccggccgaggagccggccgccgtcgaggagccccccgtcgtcgaggagccggccgagacc
acccggcgtcggcggcgcgcccggcgcgagccggagccggtcgaggtcgagaccgagccc
gaggaggagcccgaagccgaggccgaggacgaggccgccgaacacgaggacgaggacgac
gacaccgccgccggtcgtcggcggcgtcgccgtggccgccggggccggggccggggcaag
ggcggggccgacgaggccgacgacgaggagtccgaggagacggcccaggccgaggaggag
cccgaagccgaggccgacgaggaggaggacgagggtggcgacgggctgacccgccgtcgc
cgtcgtcgccgccgccggggctcgggtgacgtcgaggccaccaccgacgacggcgtaccg
accgtggtcaagatccgtgagccgcgcaagaccgtcgacgaggtgcagggcgtctccggc
tcgacccggctggaggccaagcggcagcgccgccgggacggccgggagcagcgccggacc
cgcccgccgatcctcagcgagtcggagttcctggcccgccgggaggcggtcgaccgggtg
atggtggtccgccagcgcggtgaccggacccagatcggcgtcctcgaggacggtgtgctg
gtggagcactacgtcacccgcaactccgccggcaccatggccggcaacgtctacctgggc
aaggtgcagaacgtcctgcccagcatggaggcggccttcgtcgacgtggggcgcgggcgc
aacgccgtgctgtacgcgggcgaggtgaactgggacaccaccggcctggaggggcgggcc
cgctcgatcgagcaggcgctcaagtccggcgactcggtgctggtgcaggtcaccaaggac
ccgatcgggcacaagggcgcccggctgaccagtcacatcgcgctctccgggcggcacctg
gtctacgtgcccaacggcaacgcctccgggatcagccggaagctgccggacaccgagcgc
aagcggctgcgggacgtgctgaagaagctggtcccggacggcgcgggcgtgatcgtccgg
accgccgccgagggggccagcgaggacgagctggcccgcgacgtcaagcggctccaggcg
cagtgggaggacatccaggccaaggccaccgagggcggcgcgccggtgctgctctacgag
gagccggacctggtcatccgagtggtgcgggacctgttcaacgaggacttccgcgagctg
gtgatcgagggcgagggcgcgtacgggctggtcgagtcgtacctgtcgcacgtctcgccg
gacctggtcgagcggctgcgccggcacgtcggcacctcggacgtgttcgccgagtaccgg
atcgacgagcagatcctcaaggggctggaccggaaggtcttcctgccctccggcgggcac
ctggtcatcgaccgcaccgaggcgatgaccgtggtcgacgtcaacaccggcaagtacacc
ggggccggcggcaacctggaggagaccgtcacccggaacaacctcgaggcggccgaggag
atcgtccggcagctccggctgcgggacatcggcggcatcgtggtgatcgacttcatcgac
atggtgttggagtcgaaccgggagctggtgctgcgccggctgaccgagtgcctcggccgg
gaccgcaccaagcaccaggtcaccgagatcacctcgctggggctggtgcagatgacccgg
aagcggatcggcgcgggcctgctggaggcgttcagcgagacctgcgagtgctgcaagggc
cggggcctgatcatccacaccgagccggtgccggagaagccacgcggtggcgcgggcgag
aagaccaaggtggtggccgcggcggccgcccctgctccgccggccccgaccgagcagaac
ggcacctcctcgcggcggcgggcgcgccggtccgccgcgccggaacggagcaccgtcgag
gtcgaggtcgccgagacgccgaccgaaaccgagtaccacgacaccatgggctacgacctg
tcccggtacgagacggacacggcggcggccccggcggtggccgacgcccagcgcggcgag
tcggcccggctcgccgccgccgacgacccggacgcgctggtcgacggggagaccgacgac
gagctggccgaggcgggtggcggtcgtcgccggtcccgtcgcggcggcgcgcggcggcgt
acccggccgtga
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