Montipora capricornis (leaf plate montipora): 138016044
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Entry
138016044 CDS
T10557
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138016044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaz03019
]
138016044
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
138016044
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
138016044
NCBI-ProteinID:
XP_068719307
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Position
9:complement(37331492..37366066)
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AA seq
622 aa
AA seq
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MADVEDDEKFLYGGDDSQTKETETSVVIKQEPKEDRDITENGLQAQEEDDSKEAGELSNE
DDDDDDDDDDDDVQVTIGEINPSGAPYGASYAGPVNWNFKSGSGTAAAKDRTASLKDGKG
IDVEAVGTVNGVSIHEFDLDSVDDKPWRKPGADITDYFNYGFTEDTWKQYCEKQRRMRME
LQMPKKIFVHPQPVDPVIMPDGRARKAGPPPERKMEGSIDVIGAEGSRVESRRRRDDDVM
MPMMGDGMNPDVGPPHPGMMNKKHFPPGPPGGPHDMPSVSGAPPFIPPRADPTMGPPPPG
PPHGMPLHVPPGGPIPPGMPPPFRPMGPDGPRHPEGAPPGMPPPGMPPMPGMGGPPPHGF
PPEMGIPHDGMPPPFDPTAFSGRGAMSMRGRGRGRMPVPGPPGVPGMPPPGEFPQGIDER
GHRPFEEGNPFFPGDPNQAFHPLMGPPPGIPWEAGMGRGFPPGFREGFPGAITRQDSESP
GDDDSEFGSSDDDRKRDRDSHRRRDRDRERSREHRERTRDRSPRRERDRDRDRRDRERRH
RDRDKGDRDRREERSSRKDRDKSKEQREKKRHSKTISSEASGGPEEGELVSSKKKSRRTR
ESKEVKNENTEPREEGQRTPTP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgttgaggacgatgaaaagttcttgtatggaggtgatgattcacaaacaaag
gaaacagaaacaagtgttgtaataaagcaagaacctaaagaagacagagatattactgaa
aatggcttacaggcacaagaggaagatgactctaaggaagcaggtgaactgagcaatgaa
gatgatgacgatgatgatgatgatgatgatgacgatgtccaggtcactattggtgaaatt
aatccttcaggggccccttatggggctagttatgcaggtcctgtcaactggaatttcaaa
tcaggctctggaactgctgcagcaaaggacagaacagcaagtttgaaagatggcaagggc
attgatgtagaggcagttggcactgtcaatggcgtttctatacacgaatttgatttagac
tcggtggatgataaaccctggagaaagccaggtgctgatatcactgactactttaattat
ggattcactgaagacacatggaagcaatattgtgagaaacaaaggcgaatgaggatggaa
ctacagatgcccaagaaaatatttgttcatccacagccagttgatcccgttattatgcca
gatgggagagcaaggaaggcaggcccacctccagagcggaagatggagggaagcattgat
gttattggagcggagggttcaagagttgaaagtcgtagacgacgggatgacgacgtgatg
atgccaatgatgggtgatggaatgaacccggatgtggggccaccgcatccaggaatgatg
aataaaaaacactttcccccaggtcctcctggcggtccacacgacatgccctctgtatct
ggtgcacctcctttcatccctccacgtgccgaccccacaatgggtcccccaccgccaggg
cctccccacggtatgccgctgcatgtaccacctggcggcccaatacctccaggaatgccc
cctccattccggccaatgggccctgatggacctcgtcatccggaaggagcacctcccgga
atgcctcctccgggaatgccccctatgcctggcatgggaggtccaccaccccacggattt
ccaccggagatgggaataccgcatgatgggatgccaccaccttttgatccaacagcgttt
tctggtcgtggtgccatgagcatgcgtggtagaggccgtggtcgaatgccagtcccaggt
cccccaggagtaccaggaatgcctccgcccggggaattcccccagggtatcgacgagaga
gggcacagaccattcgaagagggcaacccattctttcccggagatcctaatcaagcgttt
cacccgttgatgggtccgcctcccggaataccttgggaggcaggaatgggtcgcgggttt
cccccgggatttcgcgagggcttcccgggcgcgatcaccagacaagacagcgaaagtcct
ggtgacgacgacagcgaatttggcagcagcgatgatgacagaaaacgggatcgagattca
catagacggcgggacagggatcgggagagatcccgagagcatcgggagaggactcgtgat
cgttcgccgcgaagagagcgtgaccgtgacagagatagacgtgacagagaacgaagacat
cgggaccgtgacaagggagaccgagatagacgagaggagcggtcatcgcgcaaagacaga
gataaatcgaaagagcaacgagagaaaaaaagacacagcaagaccataagctccgaagcc
tcaggcggccctgaagaaggggaactggtatccagcaagaaaaagagcagaaggacacgt
gaatctaaagaagtgaagaacgaaaatactgagccgcgagaagagggtcagcggactccc
actccatga
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