Montipora capricornis (leaf plate montipora): 138016317
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Entry
138016317 CDS
T10557
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138016317
mRNA degradation factors
3'-5' decay
Pan complex
138016317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138016317
NCBI-ProteinID:
XP_068719582
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Position
9:complement(24817982..24841327)
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AA seq
693 aa
AA seq
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MNLSNSATAYRPSRPMLCRYYNTNGYCFYGDHCQFVHAKPSENRTAIDKNFNTNSSFHRS
SSTPAFNSNAINNVSLGTKGLRGGGSFKNSTQGTNSIPDNYVNNMQQLSITTTKLPPGSL
GGHTAPLSPSKKAFTASLAPGGPVSPVHSPKPSLGSPKTQQNPITSQEFEFLPSAANQAL
PQPPLHSQAQVPAPQQMESIGGTTYFYTQQAQQQPAVLFPSYQAYISEPSHLAHLQSNQT
RNNAFSMSAQMRQGLIHQHTLSMAQLDPDNQTVPQEVDSFHGLCPIEPLDTPTEQAQRTF
GYMTTCYKATNSKDGLIYILRRIHAFRLVNAKSMILVDQWKKINHSNLVSLREVFTTKAF
GDNSLVFVYDYHPGAETLLMRHFSGPDSTLPVSPDGTLLFPSNPRSGVPNRHRPGHRSAM
PERLIWSYIIQLSSALRTVHAAGLACRVIDPSKILLIGNSRLRINGCGIFDVLSFDASNS
PNAMIPHFQQEDLTSLGKLVLALACYSLQAVQREHIQQSLEYMAVNYSSDLKNLIIYLLS
SPLSAHMKSVNDIMPMIGARFYTQLDAAQIKCDVLEGELAKEMENGRLFRILCKMGTINE
RPEFSMDPSWSETGDRYLLKLFRDYLFHHVTESGGPWIDLAHIVACLNKLDAGSPEKVCL
VSRDEQSVLVVSYRDLKTCFESAFSEILSASLT
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttctaattcggcgactgcttacaggccttcgagacccatgctgtgtcgttat
tataacacgaatggatactgtttttatggcgatcattgtcaatttgtccatgcgaagcct
tctgagaaccgaacagctatagacaagaactttaataccaactcatccttccacagaagc
tcttcaacaccggcattcaactcaaacgcaatcaataatgtctcactcgggacaaaagga
ctgcgtgggggaggcagtttcaagaatagtacccaagggacaaattccatacctgataac
tatgtcaataatatgcaacagttgtcaataacaacaaccaagcttcccccaggttctctt
ggtggtcacactgctccgctgtcaccttccaagaaggcatttacagcttccttagctcct
gggggtcctgtgtcacctgtgcattctcccaaaccatcccttggttcaccaaagacacaa
caaaaccccatcacatctcaagaatttgaattccttccgtctgctgcgaaccaggctctt
cctcagcctccattacatagtcaagcccaggtcccagctcctcagcagatggagtccatt
ggaggcacaacgtacttctacactcagcaagcacaacagcaacctgctgtgttatttcct
tcgtaccaagcatacatctcggaaccttctcatcttgcacatctccaaagcaatcagaca
cgcaataatgccttctctatgtcggcacagatgcggcaggggctcatacatcagcataca
ctgagcatggcacagcttgacccagacaatcagactgttccacaagaggtagacagtttt
catggactgtgtcctatagagccacttgatactccgacagaacaggctcaaagaacattt
ggctacatgacaacttgctacaaagccaccaattcaaaggatgggcttatttatatactt
cgcagaattcatgcttttcgactggtgaatgctaaatccatgattcttgtggatcagtgg
aaaaaaattaatcactccaaccttgtcagcctccgagaggttttcacgacaaaggcgttt
ggagataactctcttgtatttgtttacgattatcacccgggagcggagaccttacttatg
aggcacttctcgggcccagattctacactccctgtcagccccgatggcacgttgttgttt
ccctcaaatccccgctccggggtccccaacaggcacagacccggtcaccgaagcgccatg
cccgagcgcctcatctggagttatattatccaactttcttcggctctgaggacagtacat
gcagctggtttggcttgcagagtgattgatccatccaagattttgttaatcggaaattcc
agacttagaataaacggctgtggaatatttgatgttctcagtttcgatgcaagtaacagt
ccaaacgccatgattcctcattttcagcaagaagatctaacatcccttggtaagctggtt
cttgcattggcgtgttattcccttcaagctgtccagcgggagcatattcaacagtcatta
gaatatatggcagtgaactattcctcagaccttaaaaacctcatcatatatcttctcagt
agtcccctttctgcgcacatgaagagcgtgaatgacatcatgccgatgatcggcgccagg
ttttacacgcaacttgacgcagcgcagatcaaatgcgatgttttggaaggtgaactcgct
aaggaaatggaaaacggtcgactttttagaatcctctgcaagatgggaaccatcaacgag
cgaccagagttcagtatggacccaagttggtcggagactggtgaccgatatctgttgaag
cttttcagggactatttgttccaccacgttaccgagagcggaggaccatggatagacttg
gctcatattgttgcctgtctcaataagctggacgcaggttcgcctgagaaagtttgcctg
gtatccagggatgaacagtccgtcttagtggtctcttatcgcgacttgaagacttgcttc
gagagcgccttcagtgagattctgtctgcttctctgacgtaa
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