Montipora capricornis (leaf plate montipora): 138017048
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Entry
138017048 CDS
T10557
Name
(RefSeq) nucleoporin p54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138017048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaz03019
]
138017048
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138017048
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
138017048
NCBI-ProteinID:
XP_068720359
LinkDB
All DBs
Position
9:15443240..15468062
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AA seq
528 aa
AA seq
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MSLFGSSNQPSTGGGFAFGTPSTTATAFGFGTSQTGNTAGKVFGLTNPSFGGFGAATTTS
TGSVFGTSFGVKTTASSTFGFGTTTSVAPSLGGGLSTGFGATGGLGGSTFGQQPTAVVTG
LTQPSQGILGRSTQSAQTLLAQLTAALSRPQIHGDERDGIIAKLNQLQACWGTGKGFYNQ
QGAVDFSPQNPFCRFKVIGYSRLPTASNEDGHLSIEIKKKESEVRALQQGLVDALHKCLG
SKTTLMVCIEGIKPLPEDRSEVILYVVERHPNGSSRTVPATDVFTHLNQANIKTQLQSIG
IVNIYMKTSMSPSQLQHYLENPPVGIDSLLWEQAKKDNPDPQRLIPMVITGFSELKKRQK
LQEQETLQHQKRTALITEEITELQHNHATTMAKLAQFKRKHLELSHCILEIMIKQECMRK
SGYSVQADEEQLRVQLECLQAELNAPSQFKARLSEMMSQIRLRQSQAGERLGPGDGRYVV
EGVMQEQLKQHLERQQVGLMHLIGIIKEDLQDLATIERGLTELPSNRS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtccctttttggttcttccaaccaaccttcgactggtggagggtttgcatttggtact
ccttcaaccacagctacagcattcggttttggaacaagtcagactggcaatacagccggc
aaggtttttggtttgacaaatccaagttttggtggcttcggagcagcgacaacaacttct
actggatcagtatttggaactagctttggcgtcaaaacaactgcttcctccacttttggt
tttggaacaactaccagtgtagcgccgtctctcggagggggactaagtaccggatttggg
gcaactggaggccttggtggatcaacctttggtcagcaaccaactgcagttgtcacaggc
cttacgcaaccatcacaaggaattttgggccggagcacacagtcagcacaaacactgtta
gctcagctaacagctgctttatctcggcctcagattcatggtgatgaaagagatggcatc
atagcaaaactaaatcagttacaggcctgctggggaactggtaaaggcttctacaaccaa
caaggagctgtggacttttcaccacagaatccattttgtcgttttaaagttatagggtat
agtcgtcttcctacagccagtaatgaagatggacacttgtctattgagataaagaaaaaa
gaaagcgaggtgcgtgccttgcagcaaggacttgtggatgctctgcacaagtgcctgggc
agcaaaaccactttgatggtgtgtattgaaggaattaaacctcttcctgaggacaggtca
gaagttattttgtatgttgttgaaaggcatccaaatggatcctctagaactgttccagcc
acagatgtctttacacacctcaatcaggccaacattaagactcagttgcagagcattgga
attgtcaatatctacatgaaaacgagtatgtctccatcacagctacagcactatcttgaa
aatcctcctgttggtattgattcacttttgtgggagcaagcaaagaaggacaatcctgat
cctcaaaggttgattccaatggtaataactggatttagtgagctaaagaagcgtcaaaag
ctgcaggaacaggaaacattacaacaccagaagagaactgctcttataactgaggaaata
acagagttacagcacaatcacgctactaccatggcaaaacttgcacaattcaaaagaaaa
cacttggaacttagccattgcatactggagataatgataaagcaagaatgtatgagaaag
agtgggtactcagttcaagctgatgaagaacaactgagggttcaacttgaatgcttgcaa
gctgaattaaacgcaccatctcaattcaaggctcgtcttagtgagatgatgtcacagatt
cgcttacgacagagccaagctggcgaaaggctggggccgggggatggcagatatgttgtg
gaaggtgtgatgcaagagcaactgaaacaacatcttgagcgacagcaagttggtctgatg
catttgattgggatcataaaggaagaccttcaagatttggctactatagagcgcggactc
acggaacttccttccaatagaagctaa
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