Montipora capricornis (leaf plate montipora): 138019915
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Entry
138019915 CDS
T10557
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03040
Spliceosome
Brite
Enzymes [BR:
mcaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138019915
Spliceosome [BR:
mcaz03041
]
Complex C
Other components
Step II factors
138019915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_DEAH11
Helicase_C
IBR
OB_NTP_bind
AAA_22
DEAD
IBR_1
RRM_DEAH11
HA2_N
HA2_C
KH_DEAH11_2nd
IBR_2
zf-RING_2
zf-RING_UBOX
nSTAND3
AAA_19
AAA_30
KH_DEAH11_1st
KH_1
ATPase
LdpA_C
Nup35_RRM_2
DUF3347
DUF5448
Motif
Other DBs
NCBI-GeneID:
138019915
NCBI-ProteinID:
XP_068722983
LinkDB
All DBs
Position
10:complement(28947090..28959908)
Genome browser
AA seq
1653 aa
AA seq
DB search
MAKEKPCRLVIKPPETLNNISQEIMTQYVKECLQNKFVFSLEDVKSVKGKQCQFTFVFES
GNQGRKAEQLLKENAKSAGEEIEICLLKETEEATANAFPVKCANEIHLKIKKLTEQHGKK
IQEITGLLENLRVRKHISLNEYEEILSERAALENKKLELELQREEFARFSDQLIQSLLAP
EGKSQANAEKAIKELRNSFGRECHRLDAALPMYAKKSLIVKTIKDNQVCVVLGETGSGKS
TQMTQYLYDAGFADKGVIICTQPRKVAATSLAVHVAREMGGVPGQIVGCHIGGSIQASKA
TRIVYATDHGLLNECIRDASLSKYSCIIIDEAHERSLYSDLLLGMIKKTLPRRPDLRVVI
TSATIDPALFVAYFDQCPVLKVSGRMFPVEVIWRNDSSNSFGDYLQTAIDTVREIHHREG
QGDILVFLTSPVETERACENLSKLEPDPNLVCLPLHGKLRQEEQKKVFELLSNKRKVVFA
TNCAETSITIPGIRYVIDTGMVKEMKYDSKRNKSSLEVTTISKSSAEQRKGRAGRTQEGK
CYRLYSEEEYEALERGSTPEILRVHLGQAVLKLMDLGIENISQFEFVESPPSESIEMALE
LLSSLGAIENGSLTELGRKIARVPVEPRLAKLIFDGINQGIGAEAVALAAIATVSGSVFF
RMGSDEERQLADRRKIRFCHSGGDLLTLLKVYRQYLKQPKAKRNKWAFDSSLNAKSLRLT
EETVKELKLALKHELVLKVPDAVQESDEIDQTLQRILISCYVTNLAVFTGHEKAGYRVVS
SNLCVQLHPSSALKFLGATPQFVVFEQMLKTSRDFAVNTTPVDEGWLCEMISAGTLNHTM
HELKSIVMTQASLPCSPDLMKVAFGGVRRQVLREVEETISKLCDNSFVVLEKDESLGQLR
VFVPPQHTAKALFVVGESLEQSRRLLRCEDEEEQLKEDCTGVRIVWGPAGEVTEVLMPHM
YRTVTVSDVDNGQKVIERLKSFGDIVKHRFHKQDGKTRLFVTYKRSQDAYRAVNSSFDDS
LDCGLKVQLSHSVPSGMRSQVSQFKLKATWWRRPGRGMGSIKFSSSEDYYYAIGNLSSLM
IRSRLVQFQPDKKRPEQIFMRGLDPQTSEEDVKSAIERILPSVAVEKIFILRTQEFETTD
EIVDSQKTSLKESLRVFAPEGKCSVDVMKPRAEGVEGRAFVRFEVFGEGQGALRGLNGKG
ILGIGTITLQCNLSTTLLCPRNVFTVIKDELAESEKELKQLEQTSKGKLVNIKDDPKNKR
IAIEVRSDCTDHFIRATTIINAILSGDEIDCKMSKNLEILLTTAAKEVFQTIQNETNTMI
SQDWRNKVVRIHGQQGNREAAKRAINKFIDDSIASNSHSWQIELRGPGKPRGLLKALFER
FGVELHGLQEIPDVQNISVEFRRHILKIISSEEAEKTIKCFVDECCESLMKNSPLQTEKF
IEDQLTCGICLCYLDATDDIYRLACCGHAFDRKCIIQQLKSAEVPLKCVIEDCGEPVALR
DLQNLLNQRERKKLVSSALDAHVRCNPDSVKYCPTPDCRMVYRVSTDGRSHKCGACLADI
CTSCHMQFHSGLTCAMFKSEKNVEEDFEAWMGKDPNNRKHCPKCSAPIEKNEGCNHMECS
LCKSHMCWLCLSVFATGQEVYTHQRHCPNRSGV
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaaaaccatgtcgtttggtcatcaaacctccagagacgctaaataatatt
agccaagagataatgactcagtacgttaaagaatgtcttcagaacaaatttgtgttttcc
ttagaagacgtgaagtctgtgaaaggaaaacaatgtcagtttacgtttgtttttgaaagt
gggaatcaaggaagaaaagcagaacagttattgaaagaaaatgccaagagcgctggagag
gaaatcgaaatttgtcttctcaaggaaactgaagaggccacagcaaatgcatttcctgtc
aaatgcgcgaacgaaattcacttaaagataaaaaaactcaccgaacaacatggtaagaaa
attcaagaaattactggtcttttggagaatttacgggttcggaaacacatcagtttgaat
gagtatgaagaaattttatcagaaagggcagcattggagaacaagaaattggaacttgaa
ctgcaacgagaagagtttgcgcgtttctctgatcaactaattcagagcctccttgctcca
gaaggcaaatcacaggcgaatgccgaaaaagctatcaaggaattgaggaattcgtttgga
cgagagtgccataggcttgatgcggcgcttcccatgtatgccaaaaagagtttaatcgtc
aagacgatcaaagataatcaggtttgcgttgttcttggagaaactggatctggcaaaagt
actcaaatgacacagtatctgtatgacgctgggtttgctgacaaaggcgtgatcatttgc
actcaacctcgaaaggtcgccgcgacaagtttagctgtccatgtggctcgggagatggga
ggcgtccccggccagattgtaggatgtcacattggtgggagcattcaagcaagtaaggct
actcgaatcgtgtacgcaacggatcacggtcttctcaacgaatgtatcagagatgccagt
ttgtccaaatattcttgcataattatcgatgaggctcatgaacggagtctatattcagac
ctgcttctgggaatgatcaagaagaccctcccgcgacgccctgatcttcgagtagtcatc
acttcagccacaattgatcctgctctgtttgttgcatactttgatcagtgcccggtgtta
aaagtgtctggcagaatgtttccagtagaagtgatatggagaaatgattcctcgaacagc
tttggggattatcttcaaactgcgatagacactgtgcgggaaattcaccacagagaaggt
cagggagatattctcgtgttccttacctcgccagtagaaacagaacgagcgtgtgaaaat
ttgtccaaattagaacccgatccaaaccttgtttgtcttcctcttcatggtaagttgcgc
caagaagagcaaaagaaagtgtttgaattgctctccaacaaacgcaaggtagtatttgcc
accaactgtgcagagacttcaattacgattcctggaataaggtacgtgattgacaccggc
atggtcaaggagatgaaatacgattcgaaaaggaacaaaagttcgctggaggtaacaaca
atcagcaagagttctgctgaacagcgcaaaggaagagcaggaaggactcaggaaggaaag
tgttatcgactttacagcgaagaagagtatgaagctttggaaaggggatcaacgccagag
attcttagagttcaccttggacaagcagtgctgaaactgatggatcttggaattgaaaat
atatctcagttcgagttcgtagaatcgcctccgtctgagtctatagagatggcgttggag
ttattatcgtccctaggagcaattgaaaatggctcgcttactgaattgggtagaaagatc
gctcgagttcccgtggagccacgtttagcaaagctgatatttgatggcattaatcaagga
atcggtgcagaggctgtggcacttgcagcaatagcaactgtaagtggcagtgtgttcttc
cgcatgggaagtgacgaagaaaggcaacttgcagatagaagaaaaatacgtttctgtcac
agcggcggcgacttgttgacgttgctgaaagtctacagacagtaccttaaacaacccaaa
gcgaaacgaaataaatgggccttcgacagcagcttaaatgctaagtcactccgcctgaca
gaggagacggtgaaagaactcaagttggccttgaagcacgaactggtcctgaaagttcca
gatgctgttcaagagagtgacgaaattgatcagacgctacaaagaattttgatttcttgt
tatgtgaccaaccttgccgtgtttacaggccacgaaaaagcaggatacagagtagtgtca
agtaacctgtgtgtgcaattgcatccttcttcagcactgaaattccttggcgcaacaccg
caatttgttgtctttgaacagatgttgaagacatctcgggattttgccgtcaacacgact
cctgtcgatgaaggatggctttgtgaaatgatatcagcgggtacgttaaaccataccatg
catgagttgaagtcaatagtgatgacacaagcttcgcttccttgtagtccagaccttatg
aaagtagcatttggtggtgtccgaaggcaagtgctccgagaagtggaagaaacgatctcg
aaattgtgtgacaatagctttgttgttttggagaaagatgaaagcttaggacaattgaga
gtcttcgtcccaccgcagcacaccgcaaaggccctgttcgtcgtgggggagtcgttagaa
caaagtagacgattactaaggtgcgaagacgaagaagagcaattgaaagaagattgtaca
ggcgtcagaattgtgtggggaccggctggtgaagttacagaagtgctaatgcctcacatg
tataggactgtcactgtcagtgatgtagacaatggccagaaggttatcgaacgtttgaag
tcctttggagatattgtaaagcaccgctttcacaaacaggacggaaagacaagacttttt
gtgacttataagaggtcccaagatgcataccgagcagtcaacagctcttttgatgactcc
cttgattgtggccttaaagtacagctgagtcactcggtgcccagtggaatgcgttcgcaa
gtttctcagttcaagttgaaagcgacatggtggcgccgccctggaagaggcatgggatca
attaagttttcttccagcgaagattactattacgcgattggcaatctttcttcgctgatg
ataaggtcaaggttggtccaatttcagccagacaaaaagcgccctgagcagatatttatg
agggggcttgatcctcaaacaagtgaagaagacgttaagtccgctatcgaaagaattctt
ccaagtgtagcagtcgaaaagatatttatcctaagaacacaagagtttgaaactacagat
gaaatcgttgactcacaaaaaacatcactgaaagaaagtttgagggtttttgcgcctgaa
ggaaaatgtagcgttgatgtaatgaagccgcgggcggaaggagttgaagggcgtgctttt
gtaaggtttgaagtctttggggaagggcaaggagctttgaggggtcttaatggaaagggc
atcttaggtatagggaccatcaccctacaatgtaacctttcaaccactttgttgtgtccg
agaaacgtgttcaccgtcattaaagatgagctggctgaaagtgaaaaggaacttaaacag
cttgaacagacctcgaaagggaagcttgtgaacataaaagatgatccgaaaaataaaaga
attgctatcgaggttcgcagtgattgcacggatcacttcattcgtgcgacaactattatc
aacgcgattctgagcggagacgagatcgattgtaagatgtccaagaatctggaaattctc
ctcaccactgcagcaaaggaagttttccagaccatccagaacgaaacgaatacgatgatt
agccaagattggcggaacaaagtggtcagaatacatggacagcaaggcaatcgagaagca
gcaaagcgtgctatcaacaagtttattgacgattccatcgcgagtaatagccactcatgg
cagatcgagcttcggggaccaggcaaacctcgagggttgctgaaagcgctctttgaaaga
tttggcgtcgaattgcatggactacaggaaattcctgatgtccaaaacatcagtgttgaa
tttcgaagacacattctaaagataattagctcagaagaagcggaaaaaactattaaatgc
tttgtggatgaatgctgtgagagtcttatgaaaaactctccattacagaccgagaaattc
atcgaagaccagttgacgtgtggtatctgcctgtgttatttggacgctacagacgatata
tacagacttgcctgctgtggtcatgccttcgacaggaaatgcatcattcagcagctaaaa
tctgcagaagtcccactgaagtgcgtgatagaagactgcggagagcctgttgcattgaga
gatttgcagaacctgctgaatcagagggagaggaaaaagcttgtttccagcgccttagat
gcacacgtaagatgcaaccctgactctgttaaatactgtccaacgcctgactgtcggatg
gtataccgtgtctcgacagatgggagaagccataagtgtggcgcatgtttagctgacatc
tgtacctcatgtcacatgcagtttcacagtggtttgacgtgtgctatgttcaaatcagag
aaaaacgttgaggaagatttcgaggcgtggatggggaaggatcctaacaacaggaaacac
tgtcccaaatgcagcgcgccaattgaaaagaacgagggctgcaatcacatggaatgttcc
ctgtgtaaatcgcacatgtgttggttatgtctttcagtctttgcaacgggacaagaagta
tacactcaccaaaggcattgtccaaataggagtggagtttga
DBGET
integrated database retrieval system
