Montipora capricornis (leaf plate montipora): 138020024
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Entry
138020024 CDS
T10557
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
mcaz Montipora capricornis (leaf plate montipora)
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcaz03009
]
138020024
03012 Translation factors [BR:
mcaz03012
]
138020024
Enzymes [BR:
mcaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
138020024
5.6.2.5 RNA 5'-3' helicase
138020024
Ribosome biogenesis [BR:
mcaz03009
]
Eukaryotic type
Other ribosome biogenesis factors
138020024
Translation factors [BR:
mcaz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138020024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Viral_helicase1
DEAD
ResIII
NAT10_TcmA_helicase
UvrD-helicase
nSTAND3
AAA_16
Flavi_DEAD
AAA_22
SLFN-g3_helicase
PhoH
AAA
nSTAND_NTPase5
ATPase
Glyco_tranf_2_3
AAA_25
AAA_7
UvrD_C_2
cobW
bpMoxR
Motif
Other DBs
NCBI-GeneID:
138020024
NCBI-ProteinID:
XP_068723115
LinkDB
All DBs
Position
10:complement(14741195..14757816)
Genome browser
AA seq
1026 aa
AA seq
DB search
MEADVSQFVKRTICLLNLERKTEIEETKSLQENISPKELQRRGVCLLKLRIRSRKTGLYG
RHLLTFELRKTTNPDGKLPSHSLTPGDIVGLGWLNAVQNASDIASGIVSHVTQTAVTVAF
NETADSLSFDDEGPFKLVKLANDVTHKRIKSALDSLSKYRDGPAAHLIDVFFGNVSPGPP
LQIRPYTEGTANIPCEFFNEDLDNSQRQAVKFALCQREVAIVHGPPGTGKTTTVVEIILQ
AVKKFNMKVLACAPSNVAVDNLVEKLVKVKVKVVRLGHPARLLSVVQEHSLDALLSNSDG
TAIVQDVRKDIDDTLTKVRKSKNVSEKKHLKQEIKSLREELRQREAKAITEILTKADVVL
ATNTSASVDGPLKHVKPEHFDLVIIDEAAQSLEAGCWVPLLQAKRCVLAGDHLQLPPTII
SKEAAKQGLEVTLMERLIKLLGDDVVRMLTTQYRMNEAIMKWSSEKLYEGRLQADASVKN
HLLKDLPGIEETEETILPLLLIDTTGCDVSEKEVEDEVSKGNEGEADIVASHVTALISAG
LQPTDIAVIAPYNLQVDLLRLRLASKYPALEIKSVDGFQGREKEAVVISLVRSNNKGEVG
FLAEHRRINVAITRARRHLAVIADSETVSHDDFLKSLMDYMSTQGEVRSAHEYIRDSLPT
FNASKPVCNFENREYDSFLSKISKAGEKKNGLKANESHKKESDDLKIERKFGSNTTSTKV
DIDKKESDETTQLDTSSSTLESSLSNNSSSVKVRNNSNDFQQPPSSKASATAKYSLETLE
KELSDFVQDASKLELPFPKTLNSQQRFNVHCIAEKLNLVHESQGEGKDRYIVVRKALQPM
SKGDDVDDEFLKTCCLCKKRVPSCNLELHSLRCEQQLKSKTAQTDITERKDASVSRTTVK
PHKTGAKTKPSAPKREEEEDFDKLLASFTKLDTQCAYDVCKQSVRTLGQTCQCCGRIYCL
SHHIPEVHGCGEAAKRRARYLANRPTSAKPKASDATRKAQLHRKLDKKLNEMSEQRKIKK
KGGNSE
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgacgtctctcagtttgtgaagagaacgatatgtcttctgaatttagaaaga
aaaaccgaaatagaggaaacaaaatctcttcaggaaaacataagtccaaaggaactacaa
agaagaggtgtctgtcttttaaaacttcgtattcgaagtcggaaaactggattatatgga
agacatcttctcacctttgaacttagaaagacgacgaaccctgatggaaagcttccttca
cattctctgacgcctggagatatagtgggactaggctggttaaatgcagttcaaaatgca
agcgacattgcttcaggaattgtcagtcatgtcactcagactgctgttacagtagcattt
aatgaaacagctgacagcctgtcatttgatgatgaggggccattcaaacttgttaaattg
gcaaatgatgtgacacataagaggattaaaagtgctcttgattccttaagcaaatacaga
gatggtccagctgcccatttgattgacgttttctttgggaatgtgtctcctgggcctcca
ttacaaatcagaccatacacagagggaacagcaaacatcccttgtgagttctttaacgaa
gaccttgacaactcacagaggcaagctgtgaaatttgccttgtgtcaaagagaagtagcc
attgttcatggaccaccaggaactggaaagaccaccactgtggttgagattatattgcag
gctgtcaagaaatttaacatgaaggtactagcttgtgcaccatcgaatgttgcagttgat
aaccttgttgagaagcttgtaaaagttaaagtcaaggttgtacgacttggccacccagca
cgtctactcagtgttgttcaagagcattcacttgatgccttgttgtccaattctgatgga
actgccattgtacaggatgtgagaaaagacatagatgacacactgacaaaagtaaggaaa
tcaaagaatgtatcagagaagaaacatctcaaacaagaaataaaatccctgcgagaagag
cttagacaaagagaagccaaagctattacagaaatactcaccaaggctgatgttgtcctg
gcaaccaacaccagtgcatcagtggatggcccccttaaacatgtgaagccagaacatttt
gatttggtgattatcgatgaggctgctcagtcactggaagcgggctgctgggtacccctg
ctacaggctaaaagatgtgtccttgctggtgatcaccttcaattacctcccaccataata
tcaaaggaagcagcaaagcagggccttgaagtgacactgatggagagactcataaagttg
ctaggagatgatgttgtacgcatgttaactactcagtatagaatgaatgaagcgattatg
aagtggtcttcagagaaattatacgagggtcggctacaagcagatgcctctgtcaaaaat
catctactgaaagaccttcctggaatagaggaaaccgaagagactatacttccccttctc
ttgattgacactaccggatgtgacgtcagtgaaaaagaggtggaagatgaagtgtctaaa
gggaatgaaggagaggctgacattgtcgcttcacatgtcactgcccttatttccgctgga
ctacaaccaactgatatcgctgtcattgccccttacaatcttcaggtagacttgctgagg
ttacgcttagcgtccaaatacccagctctggaaatcaagtccgtagatggatttcaagga
agagagaaagaagcggttgtcatttcactggttcgctcaaataacaaaggggaagtcggt
tttttggcagaacacaggcgaatcaacgtagccatcacacgagctcggcgccatcttgca
gtcattgctgattctgagactgttagtcacgatgactttctaaaatctctgatggattac
atgagcacccagggagaagtccgctctgcgcatgaatacatcagggattcactaccgact
tttaacgcttcaaaaccagtgtgtaattttgagaatcgagaatatgattcattcttgtct
aaaatcagtaaagctggcgagaagaaaaatggtttaaaggcgaacgaaagtcataagaaa
gagagcgacgacttgaagattgaaagaaaattcgggagcaacacgacaagcaccaaagtc
gatatcgacaaaaaagaaagtgacgaaacgacacaattggatacgtcatcttccacactt
gaaagtagtctttccaataactcttcatctgtcaaagtccgtaataacagcaatgacttt
caacagcctccatcatcgaaagcttctgcaacagcaaaatacagcctcgaaactctagag
aaagaactttcggattttgtgcaagatgcgtcaaagctggagcttccatttccgaagact
ttgaactcccagcaaagatttaatgttcactgcattgctgaaaagttaaatcttgtccat
gaaagccaaggagaaggcaaagatagatatattgtggttagaaaagccttgcaaccaatg
tctaaaggcgatgatgtggatgacgaatttttgaagacttgttgtttgtgcaagaaacgg
gtaccaagttgtaaccttgagcttcactcgctgcgctgtgaacaacaattgaaatcaaag
actgcgcaaaccgacataacagagcgtaaggacgcctcagtttctcggacaactgtcaaa
ccgcacaaaacaggcgctaagacgaagccctctgccccgaaacgtgaagaagaagaagat
ttcgacaagctgttagcttccttcaccaaactagatacgcaatgcgcttatgatgtttgt
aagcaaagcgtaaggactctaggccagacgtgtcaatgttgtggcaggatttactgttta
tcgcatcatattcccgaagtgcatggctgcggagaagctgctaagcgaagagccaggtat
cttgccaacaggccaaccagtgcaaaacccaaggcttcagatgctactcgtaaagcgcag
cttcatagaaaactggacaagaagcttaatgaaatgtctgaacagagaaaaatcaagaaa
aagggaggaaacagcgagtaa
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