Montipora capricornis (leaf plate montipora): 138020581
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Entry
138020581 CDS
T10557
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03440
Homologous recombination
mcaz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138020581
03450 Non-homologous end-joining
138020581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcaz03032
]
138020581
03400 DNA repair and recombination proteins [BR:
mcaz03400
]
138020581
DNA replication proteins [BR:
mcaz03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
138020581
DNA repair and recombination proteins [BR:
mcaz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
138020581
BRCA1-C complex
138020581
NHEJ (non-homologous end-joining)
MRX complex
138020581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
SbcC_Walker_B
Rad50_zn_hook
Nuf2_DHR10-like
AAA_29
SAM_KSR1
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
138020581
NCBI-ProteinID:
XP_068723645
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Position
2:complement(37500476..37576262)
Genome browser
AA seq
1320 aa
AA seq
DB search
MSSLEKMKIQGIRSYSHSEPSIIEFQKPLTLIVGPNGAGKTSVIECLNYMATGDMPPGSK
GNLFVHDPKIAGELEVKGQIKLRFRDVTGNTIVVTRTLVSEQKGKKLQTRTMEGNIMREV
HGERRSLSSKCADINREMISFLGVSKAVLDNVIFCHQEESNWPLSEGKVLKQKFDDIFAA
TRYIKALEAIRKFRQEQAQTVKEYAIDLSHLKANKEKADQIADELAQTQGKVAATEDKVK
ELNEKIKPTELRLAELACIADDVFELEKKVESLSTERRQLLKVEADLKEKIINLFNGPVE
ELHKIYSDFQKRVMEKENTLRDDECIIHKLGEDQQKLTAEENQLHVEGGRLEQQAHRHKQ
NVSDRDNAVIDLATEHNFKGYEKGPFSKDSVDQFLEEMKRKYQNIIEDTKRKREVFEKKS
NELQKKIDDMKKNQAQGEETIRLKKNFMRENQQKLRQIGLDLKSVDASANSLKTLEGDLQ
RAERELKMAHDSGNVSELGREIGELQSEKRQVDNGLRQLREEQQAMHMQSKTQAELDMMT
KEKSNKEEAIQQIMERHEEDLKTTLGTRGTTESLHTRLKEHLKEKERELKETTKNLQKLK
EQLSSKQTRKRMIVDSLTDKENRVQEHKRQISEACGENDYNTTKELIKNNIDSLQDERGI
IGSLEKIYSKFVSKLESSDVHSSGCPLCHRTFNNNREIDELATELRNKIRTLPDRRVANE
RSLNQEQNRYDHILQLAPAKETLESLENKEIPDIKSKLDEIKAEEQRIQDEITELEDVLS
ITESEEQSARQMEPDIRMLDKYKAELREIDRRISLLQSKLHGVVPGRTMQSISSEITERQ
DKSDTLNTNIDRKRTQLSRLQQQLSELETNVHDLKSKKLQLEAQLQTRTRLEQQKADLTA
NNSAFAREIEEAEADLQPLATGLEELQVQQQDVKRQKEAADEENRKLLEKIRTSGDKVRE
KNAEIRRYMNQGCDTALKENEARLRELAGRTEKLRSEKEAVSTEIDKLKEDIAKQQIRAR
ELEDNIQLKSIQEETQNIDKRIADVKEELKTFGEHQDLVSERQELQTQSDELRKDIAHYE
GRLRGYEDDARRCQRELRSDLYKNAEKRHREQFIAIKTTEMANADLEKYYKALDRAIMRY
HGLKMAEINKIIKEYWINTYKGNDIDTIEIRSDEEEGSGATKARRTYNYRVVMIKGDTAL
DMRGRCSAGQKVLASLIIRLALAETFCLNCGILTLDEPTTNLDEDNIESLANQLASIIRT
RQQQRNFQLVVITHDEEFVQNLGRADFVDYYFRIYKDDSGYSKILRQSVAALNREESLME
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctctggaaaagatgaagatccaaggaatccgtagttactcgcacagtgaaccg
tctatcatagaattccagaagccactgacattgattgttggaccaaatggagcaggcaaa
acgtctgtcatagaatgcctcaactacatggctactggagacatgcctcctggcagcaaa
gggaatctgtttgttcacgacccaaagattgcaggtgagcttgaggtcaagggtcaaata
aaattgagattcagggatgttactggaaatacaattgtcgtcacaagaactctggtgtct
gaacaaaagggaaaaaagttgcagacaagaactatggaaggaaacataatgcgagaagtt
catggggagagacgaagcttgagctcaaaatgtgctgacatcaatagagagatgatatcc
ttccttggagtatctaaggctgtgttggataatgtgattttctgtcatcaagaagagtct
aactggccacttagtgagggcaaagtactaaaacaaaaatttgatgatatctttgctgcc
acaaggtacatcaaagcactggaagctattcgcaaattccgacaggaacaggctcagact
gtaaaggagtatgcaatagacttgagtcatctcaaagcaaataaggagaaagcagatcag
atagcagatgaactcgcccaaacccaggggaaagttgctgcaacagaggataaagtcaaa
gaactgaatgaaaagattaaaccgaccgagttgaggctggctgaactagcatgtatcgct
gatgatgtctttgagttggagaaaaaagttgaatccttgtctacggaaagaagacaactc
ttgaaagtagaagctgatcttaaggaaaagatcatcaacctcttcaacgggcctgtggag
gaactgcacaaaatatattcagattttcagaaaagagttatggaaaaggaaaacaccttg
agagacgatgagtgcataatccataagctaggcgaagatcagcaaaaattgaccgctgaa
gagaaccaacttcacgtggaaggaggaagacttgaacaacaagctcataggcacaaacag
aacgtttctgatagagacaatgctgttatagatctggcaacggagcataacttcaaaggc
tacgaaaaaggccctttctcaaaagacagtgtggatcagttcttggaggaaatgaagagg
aaatatcaaaacatcattgaggacacaaagcgtaagagggaagtcttcgaaaaaaagtcg
aatgaactgcagaaaaagattgacgatatgaagaagaaccaagcacagggcgaggaaact
attcgcctcaaaaaaaacttcatgagagaaaaccagcagaagttgaggcagattgggctc
gacttgaaaagtgtggatgcttcagctaacagccttaaaaccctcgagggtgacctacaa
agagcggaaagagaacttaaaatggctcacgacagtggaaatgtgagcgagttgggaaga
gaaattggcgaacttcagtccgagaaacgtcaagttgacaacggactacgtcagttaagg
gaagagcagcaagctatgcatatgcagtccaaaacacaagctgaactggacatgatgacc
aaagagaagagtaacaaggaagaagccatccaacaaatcatggaacgccatgaagaagac
ctgaagactacactcggtacacgaggtacaacagagagtcttcacacaagactgaaggag
cacttgaaagagaaggaaagggagctaaaagaaactactaagaatctgcagaaactgaag
gaacagttatcatccaaacaaacgcgcaaacggatgatcgtagacagcttaacagacaaa
gagaatcgagtccaggaacacaaacgacaaatttcggaggcgtgtggcgagaatgactat
aacaccacaaaagaactcattaagaacaacattgactcactgcaagatgaacgaggtatc
attgggtctttggaaaaaatttattccaagtttgtgtcgaagctggagagcagtgatgta
catagcagcggatgtcctctgtgtcatcgaacattcaataacaacagagagattgacgaa
ctcgcaacagagctgaggaacaaaattcgaactctccctgatcgccgtgtggcgaatgaa
agaagcctgaatcaagagcaaaatcgctatgatcacattcttcaacttgctccggctaag
gaaactctggaatctctagagaacaaggagattcctgacataaaatccaagttggatgag
ataaaggctgaagagcaaagaattcaagatgagatcaccgaactggaagatgtcctgagc
attactgaaagcgaggagcaaagtgcaagacaaatggaaccagacattcgcatgttggac
aagtacaaagcagagttaagggaaattgacagaaggatatctttacttcagtccaagctt
catggagtcgtccctgggcgtacaatgcaatctatatctagtgagatcactgagagacaa
gataaatctgataccctaaacaccaatattgaccgaaagcgaacccagttgagtcggctt
cagcaacaactcagtgaactggagacaaacgtgcatgacctcaagtcaaagaagcttcaa
ctggaagcccagcttcaaaccaggacgcgtttggagcaacagaaagcagacctcaccgcg
aataacagtgcatttgcacgagaaattgaggaagcagaagcagatttacagcctttagcg
actggtctcgaagagttgcaggttcaacaacaggacgtgaaaagacagaaggaagccgca
gatgaagagaacaggaagttgcttgagaaaattagaacaagtggggataaagtgcgtgag
aagaacgccgaaatacgaaggtatatgaatcaaggatgtgacactgctttaaaagagaac
gaagctcgtttacgggaattggccggccgaacggaaaagctgaggagtgagaaagaagct
gtttcaacagaaatcgataaactgaaagaagacatcgctaaacagcagatccgggctcgc
gaactggaagacaacattcaactgaaaagtattcaagaggagactcaaaacatcgacaag
aggatagctgatgtcaaagaagaactgaaaacgtttggagaacaccaggatcttgtcagt
gaaagacaggaattgcagacacaatcggatgagttaagaaaagacattgcccactatgag
ggacgactaagaggttacgaagatgatgccaggcggtgccagagagaactgagaagtgac
ttatataagaacgccgagaaaaggcacagagagcaattcatcgcaattaagacaaccgaa
atggcaaatgcggatcttgagaagtattataaggcactggacagggcaattatgcgatat
cacggactcaaaatggctgagataaataaaatcatcaaagagtattggatcaacacttac
aaaggaaatgacatagacaccatcgaaatacggtcagatgaggaggaaggaagtggtgca
accaaagcaaggcgaacttacaactacagggtggttatgatcaaaggtgacactgcgttg
gacatgaggggacgctgcagcgctggacaaaaggtcttggcatccctaatcatcaggctg
gctttggcggaaacgttttgccttaactgtgggattttaacacttgacgaaccgaccacc
aacttggatgaagataacattgagagtctggccaaccagttggcttcaatcataagaacc
aggcagcaacaaaggaactttcagcttgtagttattacacacgacgaagagtttgtgcaa
aaccttggcagagctgactttgtagactactatttccgaatctacaaagatgacagcggt
tattcaaagattttgaggcagagtgttgctgcacttaaccgagaagagtctcttatggag
tga
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integrated database retrieval system
