Montipora capricornis (leaf plate montipora): 138021895
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Entry
138021895 CDS
T10557
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138021895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcaz03041
]
138021895
Spliceosome [BR:
mcaz03041
]
Complex B
Other components
Prp19-related factors
138021895
Complex C
138021895
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
zf-CCCH_2
Nup35_RRM_2
zf-CCCH_4
zf-CCCH
RRM_YTH1
RRM_occluded
zf-CCCH_PARP12
zf-CCCH_DUS3L
zf-CCCH_10
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
138021895
NCBI-ProteinID:
XP_068725018
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Position
10:complement(12580110..12590759)
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AA seq
466 aa
AA seq
DB search
MATSKSANTYNRQNWENSEFPILCQTCLGDNPYIRMTRETYGRECKICARPFTVFRWCPG
ARMRFKKTEVCQTCAKLKNVCQTCLLDLDYGLPVQVRDHALGMKDDVPKSDVNKEYYTQN
VEKELANSDGTTPGGTLGKANAPSDLLLKLARTTPYYKRNRPHICSFWVKGECKRGDECP
YRHDMPTDPNDPLADQNIKDRYYGTSDPVATRLLSQAKSMPSLEPPSDKAITTLYVGGLE
GKVEEGDLRDYFYQFGELRSITMVPRQNCAFVCFTSRAAAETAAERSFNKLILKGRRLKI
MWGKSQGQQPTPGKQGGTTLAPVPGLPGALPPPPTDNKSQPPNFFNLNAPSPAAQASVPP
PIPLTLPPPPGPVPGMPPPPIGHPLPLPPGGFPPPPPFGHPPFRPPIPFYGAPPPPRVPP
PVQQGIPRPPPGPPPIHYPSQDPHRLGAGKGGEEALRPAAPAVASS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcaaagagtgcgaacacgtacaatcgtcaaaactgggaaaattcggaattt
cctattctttgtcaaacatgtcttggagataacccttacattagaatgacaagagaaacg
tatggtcgagaatgtaagatttgtgctcgaccattcacagtttttcgctggtgcccagga
gcacggatgagattcaagaaaacagaagtctgtcagacatgcgctaagttaaagaatgtc
tgccagacatgcttacttgatcttgactatggtttaccggtgcaagtgagagaccatgcc
ctggggatgaaagatgatgttccaaaatctgatgtcaacaaagagtattacactcagaat
gttgagaaagagttggccaactctgatggaaccacccctgggggaacacttgggaaagcc
aatgcacctagcgatttgttgctaaaacttgcaaggactacaccatactacaagagaaac
cgaccccatatttgctcattctgggttaagggagagtgcaagcgtggagatgaatgtcct
tacagacatgacatgcccacagacccaaatgatcctttagctgatcagaacattaaagac
agatactatggaacaagcgacccagtggcaacaagactgttaagccaggcaaagagcatg
ccgtccctggagccaccatcagataaagctatcactaccctttatgttggagggcttgaa
ggaaaagtggaggaaggagacctgagggactacttttaccaatttggggagctgcgatcc
ataacaatggttccacgacagaactgtgcatttgtttgctttacatcgagagcagctgca
gaaacagcggctgaacggtccttcaacaaactcattctcaaaggaagaaggctcaaaatc
atgtggggcaagtctcagggacaacaacccaccccagggaaacagggaggcaccaccctg
gcccctgtcccagggttacctggagctcttccaccaccaccaacagataacaaaagccaa
ccaccaaatttcttcaatcttaatgctccatcaccagcagcacaagcatcagtcccaccg
cctattccactcaccttgccacctcctcctggaccggttccaggaatgccccctcctcct
ataggtcatcccttacctctcccacctgggggattcccacccccaccaccatttggtcat
cctccattcaggcctccaattccattttatggtgctcctcctcctccccgagtgcctcct
cctgtgcagcaagggataccacgccctccacctggtcctccaccaatacactacccatca
caagatcctcacagactgggtgcagggaaaggtggagaagaagcacttcgtcctgctgcc
cccgcagttgccagttcttaa
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