Montipora capricornis (leaf plate montipora): 138022180
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Entry
138022180 CDS
T10557
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz04140
Autophagy - animal
mcaz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138022180
04148 Efferocytosis
138022180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcaz04131
]
138022180
Membrane trafficking [BR:
mcaz04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138022180
Hops complex
138022180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_5
zf-RING_Vps41
zf-RING_11
zf-RING_2
zf-RING_16
zf-C3HC4_2
LVIVD
zf_RING_Vps8_fungal
Beta-prop_RSE1_2nd
zf-RING_UBOX
Lact-deh-memb
zf-C3HC4
zf-C3H2C3
TPR_GEMI5
zf-rbx1
zf_RING_Vps8
DUF1664
UPF0184
zf-Vps39_C
Motif
Other DBs
NCBI-GeneID:
138022180
NCBI-ProteinID:
XP_068725314
LinkDB
All DBs
Position
10:17848815..17888795
Genome browser
AA seq
971 aa
AA seq
DB search
MASILDQYHQDSAGGNFNPFLGPDVTEPISTGYVEVKSEDEVPIFRRQKINFRPPSNIVD
VAVSSNMVAIALSNNELMRLDLSNPSEIDRIDITKRVDDSIHAIFMDPTARHLIVCMKSQ
ESFYLARDSKKPKPLAKMKGHLINAVAWNKSKLTESSTQTILLGTTKGLIFQTEVEPEEK
FFQGGLEKFWKQLYNVNSSGDPDEPVFGIMFDKFPATPKSDRKYFIMVSTLSRMYQFIGD
ATGTDSLDFQPLFADYENSPAPFLQMPGPLENSKLALFYPKIRGLPRSFAWLTGSGVYFG
QLDFNPQESIENITTETRLLQYKLTDGRDPIPAISVGITGFHALMLYQNRFEAVSLLSEQ
AVFEDHLPPRYGAMRGLCIDSVKKTVWIFSDSAIFQYHVTKESRDVWHMYLERGEFELAK
EYCKDNPANLDKVLTKQAEELFQNKSYTSAAKCYAQTQVSFEEVALKFIHVEERQALRMF
LLKKMDSLKKEDKTQMTMLIMWLIELYLNDLGGIMEEEGSVKREALQDEFRKFLAQTKVK
TCLDQNRKTAYDLIASHGDVENLIFFAMLMQDFEHVISHHIQHDDFPSALDVLTKQTDTE
LYYKFSPVLMQHIPRQTVSAWIDQKRKLDPRRLIPALVHYHQQGKSTQTEEAIRYLETCI
EKLGNKDQAIHNYLLSLYIEQNDDLSLLRYLQMQGQDPEEVCYDMKYALRLCSEHDKQRA
CVHIYSTMGLFEEAVDLSLKVDVDLAKIQAQKPPEDDEVLRKKLWLRIARHVVEEERDVK
KAMEFLNQCELLKIEDILPFFQDFVTIDHFKDAICSSLHEYNQHIEELKSEMQEATESAK
TIRSDIHEMRNKYSIVPALEKCSICSYPLLTRAFYVFPCHHAFHADCLKNEMLPILKEKQ
RAKVQELFNQLYRTSRSDSSTATPTSRESLKNELDDLIASECLYCGEIMIRTIDQPFILP
EEYDSVLESWM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgattctggatcagtaccaccaggattcagcagggggaaatttcaatcctttt
ctcggaccagatgtcactgaaccgatctcaacagggtacgttgaagtgaaaagcgaggat
gaagttcccatttttcggcggcaaaagatcaacttcagaccaccgagcaacattgtggac
gttgcagttagcagtaatatggtggccatagctttgagcaacaatgaactgatgagactt
gacttgtccaacccaagtgaaatagatcgtattgatatcaccaagagagtggatgactca
atccacgccatttttatggatccaactgccaggcatctgattgtttgtatgaaatctcaa
gagtcattttatcttgcgagggactccaagaaacccaaaccattggcaaaaatgaaggga
catttaatcaatgctgttgcttggaataagtcaaaattgactgaaagttctacgcaaact
attctcctaggaacaacaaaagggttaatatttcagacagaggttgaaccagaagagaag
ttttttcaaggtggactagaaaaattttggaaacaattgtacaatgtgaattctagtggt
gacccagacgaaccagtttttggaataatgtttgataagtttccagcaactccaaagtct
gacaggaaatactttatcatggtgtcaactcttagtcgcatgtatcagttcattggtgat
gcaacaggaacagattcactggattttcaaccactatttgcagattatgaaaatagtcca
gcgcctttccttcagatgccaggacctttggaaaacagcaagttagcactattttacccc
aaaatcagaggacttccaagatcatttgcttggcttacaggaagtggtgtttattttggt
cagttggacttcaatcctcaagagtctattgagaacatcacaacagaaacaagattatta
caatacaaactaacagatggaagggaccccattcctgccatttctgttggtattactggt
ttccatgctctgatgctttaccaaaacaggtttgaagctgtgtcccttctgagtgagcaa
gctgtttttgaagatcatcttcctcctcggtatggtgcaatgagaggtctttgtattgac
agtgtcaagaaaacagtatggatcttctcagattccgctatttttcagtaccatgtcaca
aaggaaagcagggatgtttggcacatgtatctcgaaagaggagagtttgagttagccaag
gagtactgcaaggataatccagcaaatctagacaaagttttaacgaagcaagctgaagag
ctatttcaaaataaaagctacaccagcgcagctaagtgctatgcccagactcaagtctcg
tttgaggaagtcgctttaaagtttatccacgtcgaagagaggcaggctctcagaatgttc
cttttgaaaaagatggacagtctgaaaaaggaggataaaacgcaaatgacaatgctgatt
atgtggttaatcgagctctatttgaatgacttgggtggtataatggaagaagaaggttct
gttaagcgcgaagccctgcaggatgaattcaggaaatttcttgctcaaaccaaagtcaag
acgtgtcttgaccagaacagaaagacggcgtatgatttgattgccagtcatggagacgtg
gaaaatttgattttcttcgcaatgctcatgcaagattttgaacatgtaatcagccaccat
attcagcatgatgactttccatcggcattagatgtcttaacgaagcagacagacacggag
ctgtattacaagttttcaccagtactgatgcagcacattccacgtcaaacagttagtgct
tggattgatcagaaaaggaagttagacccacggagactaattcctgcccttgtgcactac
catcaacaaggcaaatcgacccagactgaggaagctatccgctacttagagacttgcata
gagaaactaggaaacaaagatcaagccatacataactacttgctgtccttgtacatcgag
caaaatgatgatttgtctttattacggtatcttcagatgcaggggcaggatccagaagaa
gtgtgttacgacatgaaatacgccttgcgactttgctctgaacatgacaaacagcgtgct
tgtgtgcacatatacagcacaatgggactctttgaggaagctgttgacctctccttgaag
gttgatgttgatcttgcaaaaattcaggctcagaagccgccggaggacgatgaagtgttg
aggaagaaactgtggcttagaattgcgagacatgtggtggaggaagaacgagatgtcaag
aaggctatggaatttttaaaccaatgtgaacttctcaagatcgaagatattcttccgttt
ttccaggatttcgtcacaatcgatcatttcaaggatgccatttgttcatctcttcatgaa
tacaaccagcacattgaagaattgaaaagcgaaatgcaggaagccacggaaagcgccaaa
acaattcgatcagacatccatgaaatgagaaacaaatacagtattgttcctgcactggag
aagtgttctatttgctcttaccctctccttacaagagctttctatgtttttccgtgtcat
catgcctttcacgctgattgtcttaagaatgagatgttacccatcctcaaagaaaaacag
agagccaaagttcaggaactcttcaaccagttgtataggacatcaagatctgattcctcc
acagcaacaccaacctctagagagtcactcaagaatgagttagatgatctcattgcctct
gaatgcctatactgcggtgaaataatgattaggacgatcgatcagccctttatcttacca
gaagaatatgacagtgttcttgaaagctggatgtga
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