Montipora capricornis (leaf plate montipora): 138024940
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Entry
138024940 CDS
T10557
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
138024940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaz03021
]
138024940
Enzymes [BR:
mcaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
138024940
Transcription machinery [BR:
mcaz03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
138024940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
IBD
XPD_arch
Motif
Other DBs
NCBI-GeneID:
138024940
NCBI-ProteinID:
XP_068728240
LinkDB
All DBs
Position
11:14659599..14713904
Genome browser
AA seq
1728 aa
AA seq
DB search
MFGTGSVPFHYLQGLRLSLYSPEELKKLSVKKITNPETFDELLHPNFGGLYDPALGPTDK
DDLCGTCAQNYIFCPGHFGHLELPLPVYHPLFFKVLQKILKSSCFRCGHLLIPRVARHVF
LSQMKVLDYGLIAVADELQLISNNVAETETKGKNDVQDEDVCSNLDEHVKKALKDLDKTE
ARKRAVAKNVTNFRQQIIKDFTRSHMSDRKRYCPVCGAPSREVKNEQSNSLVLKGLSSRD
AKKWIHSEGASKLATVVQNDSNETTENATGADKDDELKKLMQQTHLTPLEVKNQIFKIWE
HYDDFLDIFLGAYPSPSAKRKRSSADMFFFEVFPVPPSRFRPISRLGDKQFENAHTGNLN
KILKDCVLVKECLADLKDPTTTTTEDEAQPAKKKRGFGRNAPATVDGDTPTQRLHNAWRK
LQTDVNGCIDSDLDKSAIKFPGIRQTLEKKEGLFRKHMMGKRVDYACRSVISPDPYMNVN
EIGIPEVFALKLTYPQPVTHWNVKELRQAVINGPLQHPGATLVEHEDGRRTLLSSTNPNQ
RHAIAKRLLTPSTDMKTVSPCKKVYRHLQNGDVLLLNRQPTLHRPSMMAHKARILQGEKT
IRLHYANCKSYNADFDGDEMNAHFPQNELARAEAYNLASTNYQYLVPKDGTPIGGLIQDH
IVAGVRMTVRGRLFNRSDYQQLVYSALSFKNIKIKLLKPCIIKPHQLWSGKQVVSTVLIN
LIPPEAQRLSILSKAKITGKNWVTRKPKEQFLGIPVLKGDDMSESEVVIRRGELMCGVLD
KAHYGPTPFGLVHCCNELYGGEMSSDLLTSLARLFTTFLQIHGFTLGVEDILVKENADKK
RRKLMKKSREAGDEAAIEALGLPEGCERSVLEEKLQAIHHNKDGSDMKQLDLNMKRKTDH
YQDLINRACIPLGLLKRFPDNNLQVMVQSGAKGSSVNCMQISCLLGQIELEGRRPPIMLS
GRSLPSFLPYDTSPRAGGFVDGRFLTGIRPQEYFFHCMAGREGLVDTAVKTSRSGYLQRC
LIKHMEGLQIGYDLTVRDSDGSVLQFYYGEDGLDVMKTSFMSEKQFSFMADNFKIFLKQV
NPHELLPHLESDEAAELEKKINKWKKKHAADRETRTSPFLYFAQDNMAPKGDQKTGEEAQ
TFGRTKADLKLFKKWRKAPMDIREWYTKKVTGCPDPVLSKLQADRHFGAVSEKFSDLVRT
YTQANPDRCLNSDDNEFEENGKLPAYRFKNLMYLKAFRALAEPGEAVGLLAAQSIGEPST
QMTLNTFHFAGRGEMNVTLGIPRLREILMTASASIKTPTMDLPLKPRSKAKKRAKQLQRI
FTKVTLAQVLESVDVWESLSTKQHPNRERIHRVRFNFLSETSYKDEFCVRAEGILHYVES
VFIKKLIVAVLKANKAKSTEKVINFAADNEQPRNDDESTPAQDDDDDDNAELSDEEGADG
DANEAKQRQRRQQHASYEAPDEDEQNELTAYQSDEDDDANEDGASTRTESTYGDEETESL
HGSSNHQSLGDSSRVQRVVESDFHVASYSYDADKEEWCEVCLKFPVTNFKVRVASIIEKL
ADQSVVYEIPGINRCFLTEANDKAVLKTEGVNLQAAWEHGDILDLTKIYTNDIHAMANTY
GIEAAGKVIKQELKNVFSAYGINVDARHLSLVSDYMTYEGTIKAFNRVGMESNSSPFQKM
SFETTTHFLRGAVLTGDTEKLSSPSSRLVVGRVVGCGTGCFDLMQPLY
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtacgggttctgtgcctttccattacctacaaggtctcagactgtctttgtat
tcgcctgaagagctaaagaaacttagcgttaaaaagataacgaatccggaaaccttcgac
gagttgttacatccaaatttcggaggtttgtacgatccggccctcggtccaaccgataaa
gatgacttatgcggtacttgtgcacagaactacattttctgtcctgggcattttggacat
ttggaactgccacttcccgtgtatcatccgttgtttttcaaagttttacaaaagattttg
aaatcatcttgttttcgatgcggtcatcttctaattcccagagtcgcgcgtcatgttttt
ctcagccagatgaaggtgctggattatggcttgattgcagttgctgatgaactccaactt
atttccaacaatgtggctgaaaccgagaccaaaggcaaaaatgacgtccaagatgaggat
gtctgttctaatcttgatgaacatgtaaaaaaggcattgaaagatttagacaagacagaa
gccagaaagagggctgtggccaaaaatgtcacaaacttcaggcagcagattatcaaagac
tttacgagaagccacatgagcgacaggaaacgttattgcccagtttgtggtgcaccctct
cgggaagtaaagaatgaacaaagtaatagcttggttttgaaaggattgtcatcaagggat
gctaagaagtggattcacagtgaaggagctagcaagttagctactgttgttcaaaatgac
tcaaatgaaacaactgaaaatgcaacaggagctgacaaagatgatgaattaaagaaactc
atgcagcagacccatctcacaccactggaggtcaaaaaccaaatctttaaaatatgggaa
cactatgatgattttctcgacatttttcttggagcatatccttctcccagtgccaaaagg
aagcgttcatctgcagacatgttcttttttgaagtcttccctgttcccccttcaagattt
agaccgatatcacggctgggggataagcaatttgaaaatgcacacactggaaatctgaac
aagattttgaaggattgtgtgttggtgaaagaatgcctggcagatttaaaagatccaaca
acaacaacaacagaggatgaagcacaaccagcaaaaaagaaaaggggttttggtaggaat
gctcctgcaactgtcgatggggatacaccaacgcagagacttcacaatgcctggcgtaag
ctgcagaccgatgtgaatggttgtattgacagtgatcttgataaatcagctataaagttt
cctggaataagacagactcttgagaagaaagaaggattgttccgtaaacacatgatgggc
aagagagtggattacgcttgtagatctgtgatttctccagatccgtacatgaatgtgaat
gaaattggaatcccagaggtttttgcattgaagttgacgtatccccaacctgttacccat
tggaatgtaaaggaattaagacaagctgtcataaatggaccccttcagcaccctggtgct
actcttgtggaacatgaagatggcagacgaactctgctcagttcaaccaatcccaatcag
agacatgcaattgccaagcggcttcttacaccatctaccgacatgaaaactgttagtcct
tgtaaaaaggtctatcgtcaccttcaaaatggtgacgtgttactattaaacaggcagccc
accctgcacaggccaagtatgatggcacacaaggctcgcattcttcaaggagaaaagacc
atccgacttcactatgccaactgcaagtcatataatgctgattttgatggagacgaaatg
aatgctcactttccacagaatgagcttgcaagagcagaggcctataacttggccagcaca
aattaccagtaccttgtgccaaaagatgggactcctatcggtggattgatccaagatcac
atcgttgctggtgtaaggatgacagtcaggggccgattgttcaacaggtccgactaccaa
cagcttgtgtacagcgccctgagttttaagaatattaagataaagttgctgaaaccgtgt
atcattaaaccacatcaattgtggtcaggcaagcaggttgtgtctaccgtcctaataaat
ctgattccacctgaagcacagcgactgagcattcttagtaaagcaaaaattacagggaag
aattgggtcacacggaaaccaaaagaacagtttctggggattccagtgcttaaaggcgac
gacatgtccgaatctgaggtggtgattcgtcgaggtgagctgatgtgtggcgtgctggac
aaagcccattatggacccactccatttggcttggttcactgctgcaatgagctgtatggg
ggagaaatgtccagcgaccttctcacctcattagctagactgttcaccacatttctgcaa
atccacggctttactcttggtgttgaagatattttggtgaaagagaatgcggataagaaa
cgacgtaaactcatgaaaaagagcagagaagctggtgatgaagctgctattgaagctctt
ggtcttcccgaaggctgtgaaaggtcagttctggaggagaaactacaagcgattcaccac
aacaaagacggcagtgatatgaaacaactcgacttgaacatgaagaggaaaacagaccat
taccaggatctcataaacagagcatgtatccctttgggtctgctcaaaagatttccagat
aacaatctccaggtgatggtgcaatctggcgcaaagggatcttcggtgaactgtatgcag
atatcatgccttctaggccagattgagctggagggacgtcgacctccgatcatgctgagc
ggtagatctctgccgtcattcttgccctatgataccagtccgagagctgggggcttcgtc
gatggacgctttttgactggtattcggcctcaagagtatttcttccactgtatggcggga
cgtgagggtcttgtagacacggctgtcaaaacaagtcgcagtggctacctgcagcgatgt
cttattaaacatatggagggtctgcaaatcggttatgatttgactgtacgtgatagcgat
ggctcagtgttgcagttctactacggcgaggatggtcttgatgtcatgaagacctctttc
atgtctgagaagcagttctctttcatggcggacaatttcaagatttttctgaagcaagtg
aacccacacgaacttcttcctcatctcgagtcagacgaagccgccgagcttgaaaaaaag
ataaacaaatggaagaagaaacacgcagctgatcgagaaacgagaacttcaccgttcctt
tactttgctcaagacaacatggcacctaaaggagatcaaaaaacgggcgaggaagcacaa
acttttggacgcacgaaggctgacctgaagcttttcaagaagtggaggaaagcgccaatg
gacattcgtgaatggtataccaagaaagtcacaggttgcccagatcctgtgctatccaaa
cttcaagctgaccgacactttggtgcggtatctgagaaattcagtgacttggtgaggacg
tacacacaggccaacccagacagatgtctcaattcagacgataacgagtttgaagagaat
ggtaagctgccggcgtacaggttcaagaacctaatgtatctaaaagcattccgcgctctt
gcagaaccaggggaggctgtgggcttattggctgcgcagtctattggtgaaccatccact
cagatgacactcaacacatttcactttgctggtcgaggggagatgaacgtcacacttggg
ataccgagactaagggaaattttgatgactgctagtgctagtatcaagacaccgactatg
gaccttcctctgaagccaagatcaaaagcaaagaagcgggcaaaacaactgcaaagaata
tttacgaaagttactctggcgcaggtgctggagtctgttgatgtgtgggaatccctttca
acaaagcaacacccgaaccgagaacgaattcaccgtgtccgttttaactttctcagtgaa
acttcttacaaggacgaattttgcgtgagagctgaagggattctgcattatgtggagtca
gtttttattaagaagttgatcgttgccgttttgaaagcgaacaaggctaaaagtaccgaa
aaagtaatcaattttgcggcggataacgagcagccaagaaatgacgatgaatcgaccccg
gctcaagacgacgatgacgatgacaatgctgagttatctgatgaagaaggcgcggatggc
gatgctaacgaagccaaacaaagacaaagaaggcaacagcacgctagttacgaggcgcct
gatgaagacgaacaaaatgaactgacggcataccagagcgacgaagatgatgatgccaac
gaggatggcgcaagcacaagaacagagtcaacttatggagatgaagaaactgagagtttg
cacggcagctctaatcatcagtcgcttggtgatagctcgcgagttcagcgtgttgtagaa
agtgattttcacgtggcttcttactcgtatgacgccgataaagaggaatggtgcgaagtt
tgcctgaagtttcctgtaacgaacttcaaggtacgagtggcttctattatagagaaattg
gccgatcagagtgtcgtttacgaaataccaggcattaaccgatgctttcttacagaagcc
aacgataaggccgtgctcaaaacagaaggcgttaatttgcaggctgcttgggaacatgga
gacatcttagacctaacaaagatatatacaaacgatattcacgcaatggcaaacacgtac
gggattgaagcagcagggaaagttataaaacaagaattgaaaaacgtcttcagtgcttac
ggaatcaacgtggacgcccgccatcttagtctcgtgtccgactacatgacgtacgaaggg
accatcaaggccttcaatcgcgtaggaatggaatcgaactcttctccgtttcaaaaaatg
agttttgaaaccaccacgcatttccttcgcggggcggtgctgactggagacacagaaaaa
ctttcttcaccttcgtctcgactagttgtcgggcgagtcgtcggctgtggaactggctgt
tttgatttaatgcaaccgctgtactga
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integrated database retrieval system
