Montipora capricornis (leaf plate montipora): 138025636
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Entry
138025636 CDS
T10557
Name
(RefSeq) superkiller complex protein 2-like isoform X1
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138025636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaz03019
]
138025636
Enzymes [BR:
mcaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138025636
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138025636
mRNA degradation factors
3'-5' decay
Ski complex
138025636
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
MTR4_beta-barrel
MTR4-like_stalk
DEXQc_Suv3
ResIII
Helicase_C
DUF3516
nSTAND3
Motif
Other DBs
NCBI-GeneID:
138025636
NCBI-ProteinID:
XP_068728921
LinkDB
All DBs
Position
2:49967382..50000610
Genome browser
AA seq
1317 aa
AA seq
DB search
MSRNLIPDYSDNKEGNGMKEKEANDECDPLEYEFDLLEIGCTGTIEVIPQSINKTPKKEL
KPLTTLPSGLPPLFAPDLKCDLEKYLLDPTSLPIHDFHKTQRFWPRERDSESLLFADVCP
VPSTLKVERNPTTGELLGYNEVMLTDTGSTAKNSMSLLRQPGPLSASVRGESTNYPFLPG
GMETQETSKAGLVLDGELNFEKDLLSMPPGFTTGVFFNDVKEGEEEEVIHLEKDLSTSTS
TPQVLAMADIMAGTTLEDLEYSDEEDELESDESDADEIPGKEESNVEQGDIIEGNAGDSL
ENVLVKEQASAGNKFTSAAPVTEKPVKQQWAVKINVTEPVKDFHKRVPNMAHKWPFELDT
FQKQAVLCLENNECVFVAAHTSAGKTVVAEYAIALANKHMTKTVYTSPIKALSNQKFREF
KDTFEDVGLLTGDVQIRPEASCLIMTTEILRSMLYNGSDTIRDVEWVIFDEVHYINDEER
GVVWEEVLIMLPAQVKIILLSATVPNTLEFADWIGRTKRKKIYVISTPKRPVPLEHFLYT
GNSNKTSNELFMIVDANSNFLTRGHEAAVAAKKAREGKSKDAYGPKSHQGTNFKEERNIW
LSLIEMLRKKEKLPVVAFTFSRKRCDENADQLGNLDLTTSTEKSLIHVFIKKCVARLKGS
DRNLPQVSRIQELLKRGLGVHHSGVLPIIKEMVEMLFGRGLVKILFATETFAMGVNMPAR
TVVFDSIRKHDGTNFRDLLSGEYIQMAGRAGRRGLDPTGTVILLCKGSVHLMADLHKMML
GKPTQLVSRFRLTYSMILNLLRVEELRVEDMMKRSFAEFHVQKDSQERKREMDELEKKLL
DIKELECTFCSEDLKSYFKTCKELSEITRTVQAAILSSSHGQRALSPGRVVTINTAEHRN
ALAVILHAENSSNQGYSTIHSHRCSSPEERKFLVLVISDLHEQSPVNNVSAAPTPSVSST
AKEGLTEEIQPFVKRKLFLPEGRCSHRVMHVNGSEVSAISVRAMKVDTSKIIADHKKRMQ
PRFRNDPPGKTTISAEQELLRLSEANPEGLSTMDPVRDFNIRDIDMVTTIARKQSLEDTI
SNFKCLDCPKFTEHFKSIANQMRLREHVTTLRFLLSDESLQHREELRQRIQVLQRLRYVD
SNSAVQLKGRVACEISNHELMITELVFENAFTNLHPTEIVALLSCFVFQQRRCSEPELTK
TLKEGKERILSMAERIACLQSECGLITSVEEFKEQYRFGLVEAVFEWARGMPFAEITNLT
DVQEGIIVRCIQRLDETCRDVRNAARIIGDPRLGEKMEEASAMIKRDIVFAASLYTQ
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggaacttaattccggattactccgacaataaggagggaaacggcatgaaggag
aaagaagccaatgatgaatgtgatccactggagtatgaatttgatcttctggaaattggc
tgcactggaacaatcgaggtcatcccacaatcaatcaacaaaacaccaaagaaagagctg
aagcctctaacaacacttccctctggtctgccacctttatttgctccagatttgaagtgt
gatttggagaaatatctcctggatcccacatcattgcccattcatgactttcataaaact
caaaggttctggcctcgtgaaagagattcagagagcttactctttgcagatgtttgtcca
gttccatcaacattgaaagtggagagaaatcctacaactggagagcttcttggttataat
gaggtcatgttgacagatactggttctacagccaagaattctatgtcccttttgcgacag
cctggaccactatctgcctctgtgagaggagagtcgaccaattacccctttttaccaggt
ggcatggagactcaggaaacttcaaaagcaggccttgttttagatggagaattgaatttt
gaaaaagaccttctatctatgccaccaggttttaccacaggagtgttttttaatgacgtc
aaagaaggagaagaagaagaagtcattcatttagagaaagatttatccacaagtacatca
acacctcaagttcttgctatggctgatatcatggctggaacaactcttgaagatctggag
tacagcgatgaagaagatgaactggagtctgatgaaagtgatgcagatgagattcctgga
aaagaagaatctaatgttgaacaaggagatatcattgaggggaatgcaggagatagtctt
gaaaatgttttagtgaaggaacaagcctcagcagggaacaaatttacctcagctgctcct
gtcactgaaaaaccagtcaaacaacagtgggcggtaaaaataaatgtgacagaaccagtg
aaggattttcacaaacgtgtccctaatatggcgcacaagtggccgtttgaactggacaca
tttcaaaaacaagctgttctgtgtttggaaaacaacgagtgtgtgttcgttgcagctcac
acctctgctgggaagacggttgtcgccgagtacgccattgccttggctaacaaacacatg
acaaagactgtgtacacctcccctatcaaagcgctatctaatcagaagtttcgcgaattt
aaggacacatttgaagatgttggtttgttgactggtgatgttcaaatcagacctgaggcg
tcttgtcttatcatgacaacagaaattctgcgttccatgctgtacaatggttctgacaca
ataagagatgtggagtgggtgatttttgatgaagtccattatataaatgacgaagagagg
ggtgtggtctgggaagaggtgctgatcatgctaccggctcaggtcaaaattattttgttg
tcggccacggtaccaaacaccctggaattcgcagactggattggtcgcaccaagagaaag
aaaatctacgtcatcagcaccccgaagcgcccagtccccttggagcacttcctttacacg
ggcaacagcaataaaacgagtaacgaactgtttatgatcgtggatgccaatagtaatttc
ctgacccgcggtcacgaggctgctgtagcagcgaaaaaagcccgggaaggaaaaagcaag
gacgcgtatggccccaagtcacaccaaggtaccaacttcaaagaggaacgtaatatctgg
ctttccttgattgagatgctgcgaaagaaggaaaagctaccagtggtcgctttcaccttc
tcaagaaagagatgcgacgaaaacgcggatcaactgggaaatcttgacctcaccacatcc
acggaaaagagtttaatccatgtttttattaagaaatgtgtggcaagacttaaaggaagt
gacagaaatctacctcaagtttccaggatacaagagctcttgaaacgtgggcttggtgtt
catcatagtggagtactgcctatcatcaaagagatggtggaaatgttgtttggaagagga
ctagtaaagattctgtttgctaccgagacgtttgcaatgggagtaaacatgcccgctaga
acagtggtgtttgattcaataaggaaacacgatggaactaactttcgagatctgttatcc
ggtgaatatattcaaatggctggccgcgcaggacggagagggctggacccgaccggaacc
gtaattcttctttgcaaaggcagtgtccatctaatggctgatctgcacaaaatgatgttg
ggcaaaccaacacagttggtttccaggttccgtctcacgtactccatgattctgaacctt
ttgcgcgtcgaagagctgcgtgtggaagacatgatgaaaagaagctttgcggagtttcac
gtgcagaaagattcacaagaaagaaagcgcgaaatggacgaattagagaaaaagctgcta
gatatcaaggagctggagtgtacgttttgctccgaggatttaaaatcgtacttcaagact
tgcaaggagctgtcagaaataacgcgaactgttcaggctgcaattctgtcttcttctcat
ggtcagcgggctctctctccaggccgtgtcgtcactataaataccgctgaacacagaaat
gcgctcgctgtgatattacatgcggaaaattcttccaaccagggctactcgaccatacat
tctcatcgatgttcaagtccggaagagaggaagtttctcgtcctcgtgataagtgactta
cacgaacaatcccctgtgaacaacgtttctgctgcgcccacgccaagcgtgtcttcaaca
gctaaagaaggccttacagaggaaatacagccgtttgtaaaacgaaagttatttttaccc
gagggacgatgttctcatagggtcatgcatgtgaatggaagtgaagttagcgctatttct
gttcgcgcaatgaaggtggatacaagcaaaatcatcgctgatcacaaaaagagaatgcag
ccgagattcaggaatgacccgcctggtaaaactaccatttcagcggaacaggagctacta
agattgtccgaggccaatcctgagggactgagtactatggatcctgtcagagattttaac
atccgggacatcgatatggtgacaaccatagcgcggaaacagagcctcgaagatacaata
tccaacttcaagtgtttagactgtccaaagttcacagaacattttaaatctattgcgaac
cagatgaggttacgggaacacgtgaccacgctccgttttttgttgtcagatgaaagtctg
caacacagagaggaactgcggcaaagaattcaggtgctacagagattgcgttatgtggat
tccaacagtgctgtgcagcttaaaggaagagtagcatgcgagataagcaaccacgaactc
atgataacagagcttgtgtttgaaaatgccttcacgaatttgcatcccacggaaatagtt
gctttactgtcatgctttgttttccagcagcgccgttgcagtgaacctgaactaacaaag
acattaaaggagggcaaggagcgcatcttatccatggctgagcggatcgcctgccttcag
tctgagtgcggtctgatcacatcagtcgaagaatttaaagagcagtacaggtttggtttg
gttgaggcagtgtttgagtgggcgcgcgggatgcctttcgctgaaataacaaatctgaca
gacgtacaggaaggaattattgttcgatgtatacagcgattggatgagacgtgccgtgat
gtcaggaacgctgctcgtatcataggcgatccaagacttggcgagaaaatggaggaagcc
tctgccatgatcaaacgagacatcgtttttgctgcgagtctttacacacagtga
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