Montipora capricornis (leaf plate montipora): 138026003
Help
Entry
138026003 CDS
T10557
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138026003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcaz03041
]
138026003
Spliceosome [BR:
mcaz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
138026003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
PRP4
Beta-prop_WDR75_1st
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_SCAP
WD40_like
Beta-prop_WDR35_TULP_N
DUF2110_C
Motif
Other DBs
NCBI-GeneID:
138026003
NCBI-ProteinID:
XP_068729274
LinkDB
All DBs
Position
2:complement(50710211..50731195)
Genome browser
AA seq
517 aa
AA seq
DB search
MSDDEDGAPLVKKPRIHFGSLETVEKERLAVGPSNDDKEKEDEEESEETSVSAAVLAGIR
AGNINISDGEYLELSEDQTSERHQELLAEFERRKKARAITVPTDDASVKARLRELGQPIT
LFGEGPPERRDRLRKLLSELGEDVPRREEEEKLKPKEELEEEVWYHEGPPELKVARMWIA
KYSLPRACERLKQMRIQQARPDPEKAAKTQELHRKLRGLNNFCSQIGDDRPLSYCQFSPD
SSMLATASWSGLCKLWSIPDCEPLAVLRGHNERVGSIVFHPEATLSLDETGPCMASCDAN
GAVLLWSLNMDTPLANIEGHEKRVSRVAYHPSGRFLASCCFDNSWRLWDLEQLKEVLHQE
GHSREVYNVAFQVDGSLVATCGFDGRGLVWDLRTGQCIMPLDGHLNKVLGIDFARDGYRI
ATGSEDQKIILWDLRKRQSIYTIPAHTNLISHVKFHDDYLTSASYDATIKVWSHPGWAPL
KTLTGHEQKISCVDVSPDGQYLVSSSFDRTFKLWSSD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatgaagatggagctccgcttgttaagaagccaaggattcattttggaagt
cttgagactgtagagaaagaacgcttggcggtcggaccgtccaacgatgacaaagagaaa
gaagatgaagaggagagcgaggaaaccagtgtatcggcagctgttctggccggaattaga
gcgggaaatataaatattagtgatggggaatacctggagttatcagaagaccaaaccagt
gagaggcatcaggagctcttagcagaattcgagcggaggaaaaaggctcgtgcaatcaca
gtacccacagatgatgcatcagtaaaggcacggctgagagagcttggccaaccaatcact
ttgttcggagaaggtccccctgagagaagagacagattaagaaaactcttgtctgaactt
ggggaagatgttcccagaagggaagaggaagaaaaactaaaacctaaagaagagttagaa
gaagaagtctggtatcacgaaggtccccctgaactcaaagttgcacgcatgtggattgcc
aagtactctttgccaagagcgtgtgagagactaaaacaaatgcgcattcaacaagccaga
cctgaccctgaaaaggctgctaagacacaagagttgcaccggaaattacggggtctgaac
aacttttgcagtcagattggtgatgacaggccactttcatattgtcagttttctccagac
tcaagcatgctggctacagcatcttggagtggcttgtgcaaactttggtcaattccagac
tgtgagcccttagcagttctaagaggtcacaatgagcgagttggttcaatagtattccac
cctgaagccacgttgtcgttagatgaaacaggtccttgcatggcatcctgtgatgcgaat
ggtgcagttcttctttggtccctcaacatggacacacctcttgcaaacatagaaggacat
gaaaagcgtgtttctcgtgtggcatatcatccctctgggcgatttttagctagttgctgt
tttgataattcgtggagattgtgggatttagagcagttaaaagaagttcttcatcaagaa
ggccactcaagagaggtttacaatgttgcttttcaagttgatggatcactggttgcaaca
tgcgggtttgatggaaggggactggtgtgggacttaagaactggccagtgcatcatgccc
ctcgatgggcacttaaacaaagttcttggaatcgactttgctcgtgatggatatcgcatt
gcaacaggaagcgaggaccaaaagatcattttatgggatttaaggaagagacagagcatc
tacacaataccagcacacaccaacttaatctcacacgtcaagtttcatgatgactactta
acgtcggcctcctatgacgcaaccatcaaggtttggtcgcatccgggatgggcgccgctg
aagactctaacaggccatgagcagaagatcagttgtgtggacgtttcaccagatggacag
tatcttgtatcaagctcctttgaccgcacgttcaaactatggtcatccgactaa
DBGET
integrated database retrieval system
