Montipora capricornis (leaf plate montipora): 138026614
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Entry
138026614 CDS
T10557
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
mcaz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138026614
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
138026614
U7-dependent histone pre-mRNA processing factors
138026614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
DUF6267
Motif
Other DBs
NCBI-GeneID:
138026614
NCBI-ProteinID:
XP_068730139
LinkDB
All DBs
Position
12:8383029..8430309
Genome browser
AA seq
1199 aa
AA seq
DB search
MKGLTRSKMAAEGRTRVRLSVASQFFNNEDVDSLAASGENSAEDSTSEKVIDLLNQAQLE
KDNKLNCLKQVQEFILNKDPTLLDNFLDEILVFQQDRSADVRRFVVGFIEEACKKDIELL
SKVQNTLAFMLNDENVAVQKRVMLSVTQLYKFALQHICKQKAISEDLEHLWELLIQIKEQ
IIDMLESDNDGIRTHAIKFIEMLVLVQSLKSQDSESLKKGEADISLEIVPRNHPLVKMTE
LREEGGSMLETLLTLIASPTISSVNLMAALGSLSAIARQRPAFMSIVVQAFESLHANLPT
SLSKSQVSSVRKNLKLHLMSLLKHPSSVEFLPQITTLLTDLGASQAELQRNMPKPSAEKR
RAEPEAIASAKKPKIDTEEVETMSTSDAVEMTAQDIIPRLNKDTVTDLVLVSMLALPDSL
PSHFHDTYTPIAAAGGQAQVVHLARLLATQMNAAKVGKGYERMEALRKAANDPRLKEAEI
MSIPVIGGAGSWGNNEAGADENQMFSYGQNQPEEDTALKRMLGGHFDLTKEKRALDLRKT
PFVPKEPAVPQLRMRKIKPFKLSDVTRILNPEERQKVMTTAVNRILKAESSAARSGVIQE
RINLLVGLVTQLGGDLRNVLLDFIQEDIRARYDLLMSWLYQEYSASESDEPSDELEAAPS
YCECLLNLMDGLYSNLDPKDKIFTRILLDIPALTEGAVMAVRMYCEDLERLQVGFSSLRE
LILKRPAAQLQLLQTLMDLTTNEKEQVRVQAIHSGKKLHARPELAEYIEKYALESLQQLL
ADHPPAPVGQDPDEVIAPGEWTDDSIKLCLYLYLALLPQNHKLFHELAKVYTASSQIIKR
IILRHLEHPVRAIGMASPELLQLVENCPTGAETLIARILNIITDKAVPTAELVKRVKELY
HKRVSDVRFLIPVLTGLTKQEIIAVLPKLIKQSPSVVKEVFNRLLGCFHSDSKVSATSPL
SPSELLVALHQIEAKSDMKSVMKASSLCFAEKTIYTQEVLAVVLHQLMELNPLPTLFMRT
VIQSLSICPRLVGFVMNILAKLITKQVWKQPKVWQGFVKCCQMTKPQSFSVLLQLPFRQL
ESVFEICPELKENLVAHVQSFTPHQRAHIPRSLLQILEKDPKKEEKKIKQEKPDKEQIDP
QDEENPTNEDKSPKRTRSHTKESQKEKRKSRRSRSRSRSPRKKKEKSSGEESASEGEVN
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggctcacacgttccaagatggcggccgaaggtcggactcgtgttcgcctgtcg
gtcgcttcacaattctttaataatgaagatgtcgacagtcttgcagcatcaggagagaat
tctgctgaagactccacgtctgagaaggtcattgatttattgaatcaagcccaacttgaa
aaagacaacaaactgaactgcttaaaacaggtgcaagagttcatacttaataaagatcct
acactacttgataatttcttggatgaaattctagtattccaacaggacagatcagctgat
gttcgccgatttgtggttggatttatagaggaagcatgcaaaaaagatattgagctattg
agcaaggtgcaaaataccctggcatttatgcttaatgatgaaaatgttgctgttcagaag
cgagtcatgcttagtgttacgcagctgtataagtttgctttgcagcacatttgcaagcaa
aaagccatatcagaagacctggaacacttgtgggagcttctgattcaaatcaaagaacag
attatagatatgttggagtctgataatgatgggataagaacacatgcaataaaattcata
gagatgttggtcttggtgcagtctttgaaatctcaggattctgagtcacttaaaaaaggt
gaagcagacatctcattggagattgttcctagaaatcatccattggtcaaaatgacagag
ctgagggaagagggaggatcaatgcttgaaactctgctgactctcattgcctcccccacc
atctctagtgttaacctgatggcagcccttgggtctctgtcagccattgcacgtcagaga
ccagccttcatgtcaatagttgtccaggcttttgaatctctgcatgctaaccttcccact
tcattgagcaaatcccaagttagcagtgtgcgaaagaatctcaagcttcatctcatgagt
ctgctgaaacatccttcatcagttgagtttcttccacaaataacaaccctcctcacagat
cttggggcttcccaagctgagctacaaaggaatatgccaaaacccagtgcagagaaaagg
agggctgaaccagaagccatagcttcagcgaaaaagccaaaaattgatactgaagaagta
gaaactatgtcgacatcagatgctgtggaaatgacagcacaggacatcatcccgaggtta
aataaggacacggtaacagatctggtgttagtcagcatgttagctcttcccgacagcttg
ccatcacacttccacgatacgtacacgcccatcgctgcggcaggaggccaagcgcaagtg
gtgcatcttgcccgtctgctggccacgcaaatgaacgccgcaaaggttggaaaaggctac
gagagaatggaagctttgagaaaggctgcaaacgacccaagactgaaggaagcagagatt
atgtcgatccctgtgattggcggagcgggttcttgggggaacaatgaagccggtgcggac
gaaaaccaaatgttttcatatggtcagaaccaaccagaggaggataccgcactgaagagg
atgttaggtgggcattttgatctgacgaaagagaaaagggctctggatttaaggaagact
ccattcgttcccaaagaacctgccgtcccacaactgcgcatgcggaaaattaaaccgttc
aagctctctgacgtgacaaggatcctgaaccccgaagagcgacaaaaagtgatgactaca
gcagtgaatagaatactaaaagctgaaagcagtgcggctcggagtggtgtcatccaggag
cgtatcaaccttctcgttggccttgtcacacagctgggaggagatttgagaaatgtcctt
cttgactttatacaagaggacatccgcgctcgttatgatttgctgatgtcctggctttat
caggaatacagcgcatcagaaagcgatgaaccgagtgacgagcttgaggcagccccatcg
tactgtgaatgtctgctaaatcttatggatggcttgtattcgaatttggatcccaaggac
aagatatttactcgcattttactggacattcctgcactgacagaaggagctgtgatggcc
gttagaatgtactgcgaagatttggagcgccttcaagttggattctctagtctaagagaa
ttaatcttaaagcgaccagccgctcagttgcagctacttcaaaccttgatggaccttacc
acgaacgagaaggagcaagtcagagtgcaggcaatccactctggaaagaagctccacgcg
agaccagaactggcagaatacatcgagaaatacgccctggaatcgctccagcagctttta
gctgatcatcccccagcgccagtgggacaagatcctgatgaagtaatcgcccctggagaa
tggacagacgactccataaaactctgcctttatctgtacctagcgctgcttccacagaat
cacaagctcttccacgaactcgcaaaagtatacactgcttcctcgcaaattataaagaga
atcatcctcagacatcttgaacatccagtacgtgccatcgggatggcgtcccctgaactt
ttacagttggtggagaattgtcccacgggagctgaaacgcttattgcaaggatccttaac
ataataactgataaagctgttcccacggccgagcttgtcaagagggtcaaggaactttac
cacaagcgcgtgtctgacgtacgatttctgatacccgtgctcacgggtctcacaaaacag
gaaatcatcgcggtgctgccgaaactgatcaagcaatcacccagtgtggtcaaagaagtc
ttcaacagactactgggctgctttcacagtgactcgaaagtatccgctaccagtcccctc
agtccatcggaactcctcgttgctcttcaccagatcgaggccaaaagtgacatgaagtct
gttatgaaagccagcagtctgtgtttcgcggagaagaccatttacacgcaagaggtgtta
gccgttgttttgcatcagctgatggaactgaatcctctccccactctattcatgaggacg
gtgatccagtccctcagcatttgccctcgcttggttggttttgtgatgaacatacttgct
aagcttatcaccaaacaggtgtggaaacaaccgaaagtctggcaaggatttgtaaagtgt
tgtcagatgacaaaaccccagtcattctccgttcttcttcagctaccctttcgacaactg
gagagtgtgtttgagatctgcccagaactaaaggaaaacttagtagcacatgttcagtcc
ttcactccccatcaacgtgcgcacatcccacgatccttactgcaaatattggaaaaggac
cccaagaaagaagagaagaaaataaagcaggaaaaaccagacaaagaacagattgatccc
caagacgaagaaaacccgactaacgaggacaagtcaccgaaaaggacacgatcgcacacg
aaggaatcacagaaagagaaacgtaaatctcgtcgatctcgatctcggtccaggtcgccg
cggaagaaaaaggagaaaagctctggtgaggagagtgcgagcgaaggcgaggtgaactga
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