Montipora capricornis (leaf plate montipora): 138029151
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Entry
138029151 CDS
T10557
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7-like
KO
K14409
protein SMG7
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138029151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaz03019
]
138029151
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
138029151
mRNA cycle factors
Common to processing body (P body) and stress granule
138029151
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
138029151
NCBI-ProteinID:
XP_068732959
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All DBs
Position
2:complement(58666516..58691534)
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AA seq
730 aa
AA seq
DB search
MAPILGSVPQVLRQAETLKAALKSSFDDFTVGSEGWQSRQRLQDLYKSILLTDLESALDK
KVEQDLWNCAFKSQIDFLRQQAKERKGTKKVEVQAVLTLFLEASSGFYIQLLQELCLTYR
LDIPGHVRSSQLGILEEINGNNCVTKKPHTQSCYYICQDCLVHLGDIARYCDDPDQAEVF
YHHALVLVPSNGQPYNQLAILASGKGDELGTVYYYCRSIAVKNPFPAASTNLQKTLSKVV
SRHNTRDVTQNISKAELGHIFLQFHGHVYLVQDLEEAKVLKDCILVALKGILKQNKFTSN
FLIKLVSITLFVLWNVKTGGADELEEFDCIGKDEEECLKLTLSFAVELFDVLVLSACESG
PSNEQSDVLPALNLLCQWFAAASPNTWNGDILKKAKIWEDFAALLNLLQVTYPHLPEKTD
LPLYEDWELQCFLPLRITQRKLTYSMKRTKPDDEVAHRVGRLVRFANRLVTSTPCILSKV
EDLATGLSQFSLKVNTSSPIEEISAQEDKFPKSPQDIDLESAGQKLLASLPTLNKATPVG
TPFAETSSLFKGPLDVGQSAASYVAPSPSTVAQYSLFQSGWNVPLTSAALAHQDQSSGRA
VVKPPNHHRATVVDPLAGSGGSTVYPPTLPSPQATENRRPTSFGTSFPSAGMQTNYPSPS
QSPFGGFGFGGGWVGSGVWAPNGASGGGGSSPSGAHNLQSIWGSDFTRSEGMSPLQQLLQ
EQKKQQKEDT
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgatccttgggtcggtgcctcaagttttacggcaagcagagactttgaaagcc
gctttgaaaagtagctttgatgatttcactgttggaagtgagggttggcaatccagacaa
agattacaagatctatacaagagcatcctcttaaccgatctagaatctgcattagacaag
aaggttgagcaagacctgtggaactgtgccttcaaaagtcaaatagactttttacggcaa
caagccaaggaaaggaagggtactaaaaaggttgaagtccaagctgtattgactttattt
cttgaagcttccagtggtttttacattcagcttttacaggagttgtgcctgacatacagg
ctagatataccaggccatgtcagatcttcacaattaggcattcttgaagaaatcaacggc
aataattgtgtgacaaagaagcctcatactcagtcatgttactacatctgccaagactgt
ttggtgcatttgggagacatagctcggtattgtgatgaccctgatcaggctgaggtgttt
tatcatcatgctcttgtgttagttccttcaaatggccaaccatacaaccagttggctata
ctagctagtggtaaaggagatgaactgggaacagtgtactactactgtcgaagcattgct
gtaaagaatccattcccagcagcatccacaaatctccagaagacactgagtaaagttgtt
tcaaggcataatacaagagatgtcactcaaaacatatccaaggcagagttgggccacatc
ttcctacagtttcatggtcatgtttatcttgtacaagatcttgaagaggcaaaggttctc
aaagattgcattcttgttgctttgaaaggcatactgaagcagaacaaattcacttccaat
ttcctcattaaactggtgtccatcactttgtttgtgctgtggaatgtaaaaactggtgga
gcagatgaactggaagagtttgactgcattggcaaggatgaagaggaatgtttgaagctg
actctgagctttgcagtggaattgtttgatgtgcttgtactgagtgcctgtgagagtggg
ccctcaaatgaacagtctgatgtgcttccagctctcaatttgctgtgtcagtggtttgca
gctgcatcccctaacacctggaatggagatatcctcaagaaagcaaagatttgggaagat
tttgctgccttgcttaatctcttacaagtgacttaccctcatctgccggagaaaacagat
cttcctctgtatgaagactgggaacttcagtgctttcttcctcttcgaatcacccaaagg
aaactgacatacagcatgaagaggacaaagcctgatgatgaagttgctcacagagttggc
agacttgttaggtttgcaaatcggttggtgactagcactccttgtatcttatccaaagtg
gaagatctagcaactggactgtcccaattttctttgaaggtcaacacctcgtcaccgatt
gaggagatctcagcccaagaagacaaatttcccaagtcacctcaagacatcgatttagaa
tcagcaggacaaaagctgttggcttccttgcccaccttgaacaaggcaacacccgtagga
acaccatttgcagagacaagctcgctattcaagggtccattagatgtcggccagtcggca
gcttcatatgtagcaccgtctccctccacagtagctcagtattcacttttccagtcaggg
tggaatgtaccccttacgtccgcggctcttgcacatcaagatcagtcatccgggagagct
gtcgttaagccaccaaatcaccaccgtgccactgtagtggaccccttggctgggtcaggc
ggaagcaccgtatacccacccaccctcccatctccccaagctacagagaaccgacggcct
accagctttggaactagttttccttcagcaggaatgcagaccaactacccttctccgtcc
cagtctccatttggtgggtttgggtttggtggtggctgggtgggctcgggagtctgggct
ccaaacggtgctagcggcggcggaggatcaagtccctctggggcgcacaacttgcagtct
atctggggttcagacttcactcgttctgaaggcatgtcaccgctacagcagctattgcag
gagcaaaagaaacagcagaaggaggacacttga
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