Entry |
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Name |
(RefSeq) collagen alpha-1(I) chain-like
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KO |
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Organism |
mcaz Montipora capricornis (leaf plate montipora)
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Pathway |
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Brite |
Exosome [BR:mcaz04147]
Exosomal proteins
Exosomal proteins of other cancer cells
138030848
Glycosaminoglycan binding proteins [BR:mcaz00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
138030848
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SSDB |
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Other DBs |
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LinkDB |
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Position |
13:complement(42743600..42780045)
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AA seq |
1557 aa
MDRQHVILLVLLDLSAAFDTVEHSVLSSLLSNSFGIRDTALRWFRSYLSDRSQHISLNGK
VSDKFQLTHGVPQGSCLGPLLFTLYVSKLFDIIKGHLPHVHTYADDTQLYLAFKPDSAVN
TLDAVNAIELCIRDLRTWMLHDKLKLNDNETEIILIGTRKQLAKVGGISLCVGDSKVFPV
KSAKNLGTWIDSNLNLKINFNNTCKAAYYHLTNVQCIRKYLDDKASQTLIHALGDDGLPG
RDGEKGSSGEEGEMGDKGDAPPPPPIPEMGIAGITGEKGLKGDEGAKGVKGQKGDFPDAA
AMKDFKGPLGENAVVNGSKGEKGEKGLNGSKGDSGAIGAQGMKGEPGLDSKGPAGMIGEP
GAVGVNGSRGPIGDNGEQGPQGVPGPPGEAGAVGNIGEPGDSIPGPNGTNGENGLKGEQG
SKGEPGGNGNPGTNGTKGDRGPQGPKGAQGGNGTIGSTEGSAGAKGEVGEKGPSGDSIVG
PPGEPGLIGMPGTPTKGVPGEPGDVGVRGVGGVPGKAGPGGPQGDNGPRGPPGQPGPQGE
KGNIGDILCGQLNADYAFAMDTSGSILESEFQIMKDFINQVIDFLLIGPNLTHVGLIDYS
NGASLQFDFLQSFEKEEIKSFVEAVPQTYGLTRIDLALKVASEELFTPTGGMRDTSRKVL
VLLTDGNQTGRDRAPNQTPLVDAVQPIKNLSVKVIAIGIGSVDRKQLATLVSDPDDILQP
SNFDELLTLVRTTVGKSCRGPHGDAGPRGPKGIPGEGGIKGIVGPRGERGDQGRKGEQGP
TGVPGPQGAVGDNGTRGDQGPPGKATPGSKGPKGDPGDPGPAGDDGLRGLNGLKGNKGAL
GAAGERGSNGDDGPQGARGPAGESGLVGEKGIVGRLGLEGIAGMRGADGVPGPKGQKGVI
GFPGIPGEEGDFGDVGEDLPGEKGEQGEEGKPGMGGLEGFPGEIGDVGARGAAGNATPGD
PGNAGFPGVKGAKGEPGPDQIEGVAIPSGDQGEPGRPGKMGMPGLDGDPGDAGAMGETGG
SGPPGEPGQSGEKGSEGSGGLPGVSGEKGSPGAPGNRGEQGQEGEKGSKGERGPDGPQGS
KGEPGKAGLPGNAGNDGVSGETGPTGPQGEKGSAGSDGQGGAPGEKGGRGEEGAQGPRGD
DGTQGETGGPGEMGAVGDPGVQGEPGDPGMLGFDGFPGPRGDRGDNGTAGSPGFSGEPGP
PGAKGEKGVDSMDVGPKGDEGDPGLMGAMGPQGPKGDAGPQGAPGVVQGPKGDDGLPGIP
STIKGKRGVDGAAGKVGAKGFPGQRGEPGQAGPIGIGGKSATGEGFHVVVHSQSTAIPDC
PLNLTRLWTGYSLLYVQGHDNSHGQDLGASGSCMRRFTTMPYLFCNVYDQCHYASRNDYS
YWLTTEISMPMMPVSASAVEPYVSRCAVCETPGPVVATHSQSTEKPNCPPGWEAIWTGYS
FLMHTGAGGSGSGQALSSPGSCLRVFRHNPFFECHGRGTCHYFANKYSFWLSTVKEMFVS
KQEPETLKAGSLLTRVSRCAVCYRVAQKKRRRRHAFPNDIPQLSSRTAAQLMAQRQS |
NT seq |
4674 nt +upstreamnt +downstreamnt
atggatcgccaacacgtgatattgctggtgctacttgacctcagcgccgcttttgatacg
gtggagcactcggtcctttcatcgctcctaagcaacagttttgggataagggatactgca
ctgcgttggtttaggtcatacctatctgaccgatcccagcacatttcactcaatggtaaa
gtttctgacaaatttcaattaacacatggtgttcctcaagggtcatgcttggggccgtta
ctgttcacactatatgtaagtaaactctttgatattattaaaggtcacttgccacatgtt
cacacgtatgctgacgatacgcagctatatctagcgtttaaacctgattctgcagtaaac
actcttgatgctgtcaatgcaatagaactttgtattcgtgacttaagaacctggatgctc
catgataaactcaaattaaatgacaatgaaactgaaataatattaattggaactagaaaa
cagttggcaaaggtgggtgggatctctctctgtgttggtgactctaaggttttcccagtc
aaatcagcaaagaaccttggcacatggatagacagtaaccttaatctcaagatcaatttt
aacaatacgtgcaaagctgcctattaccatctgacgaatgtgcaatgtattaggaaatac
ttagatgacaaagcatcacaaacactgatacatgctttaggagatgatggtttgcctggt
cgcgatggagaaaaaggctcttctggcgaagagggtgaaatgggagacaagggtgatgct
ccacccccgccccccataccagaaatgggtatcgcgggaatcacgggtgaaaaaggactg
aaaggagatgagggagccaaaggggtaaaaggtcaaaaaggagatttcccagacgcagca
gctatgaaggactttaagggtccattaggtgagaatgcagtagtaaatggatctaaaggt
gagaagggagagaaaggtttgaatggctcaaaaggagactctggtgcaattggagcacaa
ggcatgaaaggtgaaccaggactggactcaaaaggacctgctggaatgattggtgaacca
ggcgcagttggtgttaatggaagtaggggtcccatcggcgacaatggtgagcaaggtcca
cagggtgtcccggggccaccaggagaagcaggagcagttgggaatattggagaaccagga
gacagcatacctggtcccaatggaacaaatggagaaaatggtctcaagggtgaacaaggt
tcgaaaggagagccgggtggtaatggcaatcctggaaccaatggtactaagggtgataga
ggcccacaaggacctaaaggagcacaaggtggaaatggaacaattggatctactgagggc
tctgcaggtgctaaaggggaggttggagaaaaaggacccagtggtgatagcatcgtcgga
cccccaggggagcctggattgataggaatgcctggtactccaactaaaggtgttcctggt
gagccaggtgacgtaggagtcagaggtgtgggtggagtacctggaaaagcaggcccaggt
ggtccacaaggagacaatgggccaagaggaccaccaggacaacctggacctcaaggagag
aaggggaatattggagacatattgtgtggccaattaaatgcagattatgccttcgccatg
gatacttcaggaagcattctggagtctgaatttcaaattatgaaggattttatcaaccaa
gtcattgacttccttctaattgggccaaacttgacccatgttgggctgattgattacagc
aatggtgccagtttgcagttcgactttttgcagtcttttgagaaagaggaaatcaagagt
tttgttgaggctgtgccccagacatatggtttgacacggattgatttagctctcaaagtt
gcatcagaagagctgttcacacctacaggaggaatgagagacacttcgagaaaggtactg
gtcctcctcaccgatggtaaccaaactggaagagacagggcccctaatcagactcctttg
gtggacgctgtccagccaatcaagaatcttagtgtaaaggtgattgccattggcatagga
agtgtggatagaaaacagctggctacattagtctcggaccccgacgatattctgcaacca
agcaattttgatgaacttcttactctggtgcgaacaactgttggcaaaagctgtagaggt
ccacacggtgacgcaggtccacgagggcccaaaggtatcccgggagaaggcggaattaag
ggaatagtgggtccacgaggcgagagaggtgatcaagggcgtaagggcgagcaaggtcct
acaggggttcctggacctcaaggagctgtcggtgataatggaacgaggggcgatcaagga
ccaccaggaaaagcaacacctggttcaaagggaccaaaaggtgaccccggcgatcctgga
ccggcgggagacgatggtttgcgcggcttgaatggacttaagggaaacaagggtgcgcta
ggagcagctggtgaacgtggcagcaatggagatgatggtccacaaggtgctcggggacct
gcaggagagtctggtcttgttggagagaaaggtattgtaggccgtctgggacttgaagga
attgctggtatgcggggagctgatggtgttccaggtccgaaaggtcaaaagggtgtgatt
ggtttccctggaattccaggagaagaaggtgattttggtgacgtgggagaagacttgcct
ggagagaagggagaacaaggcgaagaaggaaagccaggaatgggtggtttagaaggcttt
cctggagaaattggagacgttggtgcacgtggggcagcgggaaatgccactcctggagat
cctgggaatgctggtttccccggagttaagggagctaagggtgaacccgggcctgatcag
atagagggcgtggcaattccatcgggtgatcaaggagagccagggcgtcctggtaaaatg
ggcatgccgggattagatggagatcccggagatgctggagcaatgggagaaactggaggg
agtggtccacctggtgaaccaggtcaaagtggtgaaaaggggtctgaaggttccgggggg
ttgccgggcgtgtcaggtgaaaaaggttcaccaggtgccccggggaacagaggggaacaa
ggccaagaaggtgaaaaaggatcaaaaggcgagagaggaccagatggccctcaaggttca
aagggcgaaccgggtaaagctggtttgcctggcaatgcggggaatgatggcgtttcagga
gaaacaggtcccactggaccccaaggggagaaaggttctgccggttccgacggccagggt
ggtgcccctggcgagaagggcggaaggggggaagaaggagcccagggaccacgcggagat
gatggaacacagggggaaactggaggtccaggggaaatgggtgccgtgggagatcctggc
gttcagggagaacctggtgaccctgggatgttaggttttgacgggtttccgggcccaaga
ggtgaccgaggggacaatggaactgctggttcacctgggttctccggtgaacctgggcct
cctggggcgaaaggcgaaaaaggcgtagactcaatggacgtaggaccgaagggagatgag
ggggacccaggacttatgggtgctatgggaccccagggaccaaaaggagacgccggacct
caaggtgcacccggggttgtgcagggtcccaagggagacgacggtcttccaggtatacca
tccactatcaaggggaaaaggggtgtggacggtgccgcagggaaagtgggtgcaaaaggc
ttccctggtcaaagaggtgaacctggccaagcgggacccatcggaatcggtggcaaatca
gcgacgggcgaaggatttcatgtggtggttcacagtcagtcaacagccataccagactgt
cctcttaacttgactcgactctggactggatacagcttgctgtatgtacagggacatgac
aattcacatggtcaggatcttggcgcatcgggctcatgcatgaggcgttttaccacaatg
ccttacctattctgcaacgtctatgatcaatgtcactacgcctctaggaatgactatagc
tattggctcactaccgagataagcatgcccatgatgcccgtaagcgcatctgctgtggag
ccttatgtcagccgatgtgccgtttgcgaaactccgggacctgtagtggccacacacagt
cagtcgacagagaaaccgaattgtcccccgggatgggaagcgatctggacaggatacagc
tttcttatgcacactggggccggtggcagtggatccggccaagctctttcctcacctggc
tcgtgtcttcgtgttttccgccacaacccattcttcgaatgtcacggccgcggaacctgt
cattattttgccaataaatacagcttctggctgtctactgtcaaggaaatgtttgtgtca
aaacaggaacctgagactcttaaagctgggagtcttctcactcgagtcagccgctgtgcc
gtttgctaccgtgtggcgcaaaagaagagacgaagacgtcacgctttccccaatgatata
cctcaactcagctcacgcacggcagcacagctcatggcccagagacagtcgtaa |