Montipora capricornis (leaf plate montipora): 138030848
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Entry
138030848 CDS
T10557
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K06237
collagen type IV alpha
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz04382
Cornified envelope formation
mcaz04512
ECM-receptor interaction
mcaz04518
Integrin signaling
mcaz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138030848
04518 Integrin signaling
138030848
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138030848
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
138030848
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcaz04147
]
138030848
00536 Glycosaminoglycan binding proteins [BR:
mcaz00536
]
138030848
Exosome [BR:
mcaz04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
138030848
Glycosaminoglycan binding proteins [BR:
mcaz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138030848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
VWA
RVT_1
VWA_2
Motif
Other DBs
NCBI-GeneID:
138030848
NCBI-ProteinID:
XP_068734812
LinkDB
All DBs
Position
13:complement(42743600..42780045)
Genome browser
AA seq
1557 aa
AA seq
DB search
MDRQHVILLVLLDLSAAFDTVEHSVLSSLLSNSFGIRDTALRWFRSYLSDRSQHISLNGK
VSDKFQLTHGVPQGSCLGPLLFTLYVSKLFDIIKGHLPHVHTYADDTQLYLAFKPDSAVN
TLDAVNAIELCIRDLRTWMLHDKLKLNDNETEIILIGTRKQLAKVGGISLCVGDSKVFPV
KSAKNLGTWIDSNLNLKINFNNTCKAAYYHLTNVQCIRKYLDDKASQTLIHALGDDGLPG
RDGEKGSSGEEGEMGDKGDAPPPPPIPEMGIAGITGEKGLKGDEGAKGVKGQKGDFPDAA
AMKDFKGPLGENAVVNGSKGEKGEKGLNGSKGDSGAIGAQGMKGEPGLDSKGPAGMIGEP
GAVGVNGSRGPIGDNGEQGPQGVPGPPGEAGAVGNIGEPGDSIPGPNGTNGENGLKGEQG
SKGEPGGNGNPGTNGTKGDRGPQGPKGAQGGNGTIGSTEGSAGAKGEVGEKGPSGDSIVG
PPGEPGLIGMPGTPTKGVPGEPGDVGVRGVGGVPGKAGPGGPQGDNGPRGPPGQPGPQGE
KGNIGDILCGQLNADYAFAMDTSGSILESEFQIMKDFINQVIDFLLIGPNLTHVGLIDYS
NGASLQFDFLQSFEKEEIKSFVEAVPQTYGLTRIDLALKVASEELFTPTGGMRDTSRKVL
VLLTDGNQTGRDRAPNQTPLVDAVQPIKNLSVKVIAIGIGSVDRKQLATLVSDPDDILQP
SNFDELLTLVRTTVGKSCRGPHGDAGPRGPKGIPGEGGIKGIVGPRGERGDQGRKGEQGP
TGVPGPQGAVGDNGTRGDQGPPGKATPGSKGPKGDPGDPGPAGDDGLRGLNGLKGNKGAL
GAAGERGSNGDDGPQGARGPAGESGLVGEKGIVGRLGLEGIAGMRGADGVPGPKGQKGVI
GFPGIPGEEGDFGDVGEDLPGEKGEQGEEGKPGMGGLEGFPGEIGDVGARGAAGNATPGD
PGNAGFPGVKGAKGEPGPDQIEGVAIPSGDQGEPGRPGKMGMPGLDGDPGDAGAMGETGG
SGPPGEPGQSGEKGSEGSGGLPGVSGEKGSPGAPGNRGEQGQEGEKGSKGERGPDGPQGS
KGEPGKAGLPGNAGNDGVSGETGPTGPQGEKGSAGSDGQGGAPGEKGGRGEEGAQGPRGD
DGTQGETGGPGEMGAVGDPGVQGEPGDPGMLGFDGFPGPRGDRGDNGTAGSPGFSGEPGP
PGAKGEKGVDSMDVGPKGDEGDPGLMGAMGPQGPKGDAGPQGAPGVVQGPKGDDGLPGIP
STIKGKRGVDGAAGKVGAKGFPGQRGEPGQAGPIGIGGKSATGEGFHVVVHSQSTAIPDC
PLNLTRLWTGYSLLYVQGHDNSHGQDLGASGSCMRRFTTMPYLFCNVYDQCHYASRNDYS
YWLTTEISMPMMPVSASAVEPYVSRCAVCETPGPVVATHSQSTEKPNCPPGWEAIWTGYS
FLMHTGAGGSGSGQALSSPGSCLRVFRHNPFFECHGRGTCHYFANKYSFWLSTVKEMFVS
KQEPETLKAGSLLTRVSRCAVCYRVAQKKRRRRHAFPNDIPQLSSRTAAQLMAQRQS
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atggatcgccaacacgtgatattgctggtgctacttgacctcagcgccgcttttgatacg
gtggagcactcggtcctttcatcgctcctaagcaacagttttgggataagggatactgca
ctgcgttggtttaggtcatacctatctgaccgatcccagcacatttcactcaatggtaaa
gtttctgacaaatttcaattaacacatggtgttcctcaagggtcatgcttggggccgtta
ctgttcacactatatgtaagtaaactctttgatattattaaaggtcacttgccacatgtt
cacacgtatgctgacgatacgcagctatatctagcgtttaaacctgattctgcagtaaac
actcttgatgctgtcaatgcaatagaactttgtattcgtgacttaagaacctggatgctc
catgataaactcaaattaaatgacaatgaaactgaaataatattaattggaactagaaaa
cagttggcaaaggtgggtgggatctctctctgtgttggtgactctaaggttttcccagtc
aaatcagcaaagaaccttggcacatggatagacagtaaccttaatctcaagatcaatttt
aacaatacgtgcaaagctgcctattaccatctgacgaatgtgcaatgtattaggaaatac
ttagatgacaaagcatcacaaacactgatacatgctttaggagatgatggtttgcctggt
cgcgatggagaaaaaggctcttctggcgaagagggtgaaatgggagacaagggtgatgct
ccacccccgccccccataccagaaatgggtatcgcgggaatcacgggtgaaaaaggactg
aaaggagatgagggagccaaaggggtaaaaggtcaaaaaggagatttcccagacgcagca
gctatgaaggactttaagggtccattaggtgagaatgcagtagtaaatggatctaaaggt
gagaagggagagaaaggtttgaatggctcaaaaggagactctggtgcaattggagcacaa
ggcatgaaaggtgaaccaggactggactcaaaaggacctgctggaatgattggtgaacca
ggcgcagttggtgttaatggaagtaggggtcccatcggcgacaatggtgagcaaggtcca
cagggtgtcccggggccaccaggagaagcaggagcagttgggaatattggagaaccagga
gacagcatacctggtcccaatggaacaaatggagaaaatggtctcaagggtgaacaaggt
tcgaaaggagagccgggtggtaatggcaatcctggaaccaatggtactaagggtgataga
ggcccacaaggacctaaaggagcacaaggtggaaatggaacaattggatctactgagggc
tctgcaggtgctaaaggggaggttggagaaaaaggacccagtggtgatagcatcgtcgga
cccccaggggagcctggattgataggaatgcctggtactccaactaaaggtgttcctggt
gagccaggtgacgtaggagtcagaggtgtgggtggagtacctggaaaagcaggcccaggt
ggtccacaaggagacaatgggccaagaggaccaccaggacaacctggacctcaaggagag
aaggggaatattggagacatattgtgtggccaattaaatgcagattatgccttcgccatg
gatacttcaggaagcattctggagtctgaatttcaaattatgaaggattttatcaaccaa
gtcattgacttccttctaattgggccaaacttgacccatgttgggctgattgattacagc
aatggtgccagtttgcagttcgactttttgcagtcttttgagaaagaggaaatcaagagt
tttgttgaggctgtgccccagacatatggtttgacacggattgatttagctctcaaagtt
gcatcagaagagctgttcacacctacaggaggaatgagagacacttcgagaaaggtactg
gtcctcctcaccgatggtaaccaaactggaagagacagggcccctaatcagactcctttg
gtggacgctgtccagccaatcaagaatcttagtgtaaaggtgattgccattggcatagga
agtgtggatagaaaacagctggctacattagtctcggaccccgacgatattctgcaacca
agcaattttgatgaacttcttactctggtgcgaacaactgttggcaaaagctgtagaggt
ccacacggtgacgcaggtccacgagggcccaaaggtatcccgggagaaggcggaattaag
ggaatagtgggtccacgaggcgagagaggtgatcaagggcgtaagggcgagcaaggtcct
acaggggttcctggacctcaaggagctgtcggtgataatggaacgaggggcgatcaagga
ccaccaggaaaagcaacacctggttcaaagggaccaaaaggtgaccccggcgatcctgga
ccggcgggagacgatggtttgcgcggcttgaatggacttaagggaaacaagggtgcgcta
ggagcagctggtgaacgtggcagcaatggagatgatggtccacaaggtgctcggggacct
gcaggagagtctggtcttgttggagagaaaggtattgtaggccgtctgggacttgaagga
attgctggtatgcggggagctgatggtgttccaggtccgaaaggtcaaaagggtgtgatt
ggtttccctggaattccaggagaagaaggtgattttggtgacgtgggagaagacttgcct
ggagagaagggagaacaaggcgaagaaggaaagccaggaatgggtggtttagaaggcttt
cctggagaaattggagacgttggtgcacgtggggcagcgggaaatgccactcctggagat
cctgggaatgctggtttccccggagttaagggagctaagggtgaacccgggcctgatcag
atagagggcgtggcaattccatcgggtgatcaaggagagccagggcgtcctggtaaaatg
ggcatgccgggattagatggagatcccggagatgctggagcaatgggagaaactggaggg
agtggtccacctggtgaaccaggtcaaagtggtgaaaaggggtctgaaggttccgggggg
ttgccgggcgtgtcaggtgaaaaaggttcaccaggtgccccggggaacagaggggaacaa
ggccaagaaggtgaaaaaggatcaaaaggcgagagaggaccagatggccctcaaggttca
aagggcgaaccgggtaaagctggtttgcctggcaatgcggggaatgatggcgtttcagga
gaaacaggtcccactggaccccaaggggagaaaggttctgccggttccgacggccagggt
ggtgcccctggcgagaagggcggaaggggggaagaaggagcccagggaccacgcggagat
gatggaacacagggggaaactggaggtccaggggaaatgggtgccgtgggagatcctggc
gttcagggagaacctggtgaccctgggatgttaggttttgacgggtttccgggcccaaga
ggtgaccgaggggacaatggaactgctggttcacctgggttctccggtgaacctgggcct
cctggggcgaaaggcgaaaaaggcgtagactcaatggacgtaggaccgaagggagatgag
ggggacccaggacttatgggtgctatgggaccccagggaccaaaaggagacgccggacct
caaggtgcacccggggttgtgcagggtcccaagggagacgacggtcttccaggtatacca
tccactatcaaggggaaaaggggtgtggacggtgccgcagggaaagtgggtgcaaaaggc
ttccctggtcaaagaggtgaacctggccaagcgggacccatcggaatcggtggcaaatca
gcgacgggcgaaggatttcatgtggtggttcacagtcagtcaacagccataccagactgt
cctcttaacttgactcgactctggactggatacagcttgctgtatgtacagggacatgac
aattcacatggtcaggatcttggcgcatcgggctcatgcatgaggcgttttaccacaatg
ccttacctattctgcaacgtctatgatcaatgtcactacgcctctaggaatgactatagc
tattggctcactaccgagataagcatgcccatgatgcccgtaagcgcatctgctgtggag
ccttatgtcagccgatgtgccgtttgcgaaactccgggacctgtagtggccacacacagt
cagtcgacagagaaaccgaattgtcccccgggatgggaagcgatctggacaggatacagc
tttcttatgcacactggggccggtggcagtggatccggccaagctctttcctcacctggc
tcgtgtcttcgtgttttccgccacaacccattcttcgaatgtcacggccgcggaacctgt
cattattttgccaataaatacagcttctggctgtctactgtcaaggaaatgtttgtgtca
aaacaggaacctgagactcttaaagctgggagtcttctcactcgagtcagccgctgtgcc
gtttgctaccgtgtggcgcaaaagaagagacgaagacgtcacgctttccccaatgatata
cctcaactcagctcacgcacggcagcacagctcatggcccagagacagtcgtaa
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