Montipora capricornis (leaf plate montipora): 138038736
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Entry
138038736 CDS
T10557
Name
(RefSeq) tetratricopeptide repeat protein 37-like isoform X1
KO
K12600
superkiller protein 3
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138038736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaz03019
]
138038736
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
138038736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_14
TPR_17
TPR_11
TPR_CcmH_CycH
TPR_8
TPR_19
TPR_12
ARM_TT21_C
ANAPC3
TPR_9
TOM20_plant
Fis1_TPR_C
DUF7017
PerC
TPR_6
Motif
Other DBs
NCBI-GeneID:
138038736
NCBI-ProteinID:
XP_068740875
LinkDB
All DBs
Position
2:9209376..9270294
Genome browser
AA seq
1655 aa
AA seq
DB search
MATASRETKTFLRNARECIKNKEYKEALKHCKAVLKLDKTNYTALVFIGKCATELNQADQ
SLMAYKKAIESDETQPLAWQGLAALCEKEDDPKLNADLCEVYTKLLQFYEGEKTKWMEVA
TKLAKLYENQGDALKAAERWEEIATLTEDKTEQFHIWSRIIEILEKRQSLGQENRNIKLK
AIYEKIVTCESLPEELHNQLERHFECYIKLLISKLQAGEEQGLLKEEKSEINDAAKSMIT
LFPTSKFALEFQGKDFLHSLVAAPTLEMSDLFQRLYHMYPESSVGAIGLGSVLLHQKDFS
VAMVLLQKGLQTFSDCPYGWLLLCEAQKSLHRYQGASNSAQKGLNCVKCSSHDVKKKLQR
KLSFSRADALLKQSPEGVVLAKEIYEELLKDVEGDEEVEILTGLGKVYLALGDVPQATQI
CAKALSIDKSFAGALALQGEISFHEGHFDDAELRFLEAIEKSRECAFYHFLLGKLYWEMD
ENLRADKKKCLVQFLKAAKLDPNYCPSFLYLGHYYLKVLKDVSKASRCYQKAFDLDPDSE
DAGAALGDSLTELGEEVAALNLYKNITAMSSPGKGKWAWLRLGLSHLKHNESTEAITCFQ
SALRADPKDRHCWECLGEAYMSRGSYTAAMKAFTKAAELDSSSLYCLYQLAAIKQLLSVH
GEAIKEYKLILEMQHDYVPALKGLGETYLNQARTAIEQNFNGKAVDCVLEAVGVLARAVQ
HRPGLSCLWKLLGDCCTIIHPLANESLRGKIPDNLRKYVPGEPLEFQHKKEFLALGSSAY
GRALKLQPECGTLWGDLGFNSFQQAKILDGEDKKRMARRSLQALKKGLSLQPSSHKLWNS
LGVVAASEEIKNPELSQHCFIMSIKTEPNNVIAWTNLGVLYVKHGKIELAHEAFKNSQAL
DPSYAAAWIGQATIAEIIGSDEAMDLFRHTTELGSHSEGNIGYAHWVCSSLLPDKSSENH
VILKGQPVPTLSHLHPECRKAVLQSATALSKYTDCIRNNAGAFNMYGLILENQRLFLQAE
KAFERAITLLQGSGSEDKQRHLNAVMINHARVLRSLGRYKESVARYQAVKPLKEFHDVCG
LALSLFMASQLKESYKAYEQAFQLAETDTDRSCVITALGMLGYALNDKDAAKVMLFKSSQ
LKPACNQGLMALCTLGLVNGDATLAGAALGELMRANSGSEVLNGHICYLYSRFYALQGNQ
KLGRSHIMKAIHRNPRSSVLWSQLASYLLQACPDELEAAACCSESSARLGGSHSVEHNPA
IHPAGIVGSGALRNHDNKMARIGASSRTRSGLIASQKAVHAHPNHLSSWAVLAASVTAHS
IARNRERIGREQGILGARIAKFVQVIASAEINSLNLLCESQLPALVNWQTSQLESLRSWA
IIHHGYGSLYFGKLEDAANIVDQALPLYSSVPQISTQLHFLKAQVLLAGEEPVETGLNLL
QTSLLSSPIHSPNVWQVLAEVQANQGSATAAELCYRQCLQAGMDSGSQSWRVVPLIRLAL
LALRQAQRETSDRDRWISLAFEASSEVLKLKIAFTVAYLIQGIVYFLQDNARASKRALQH
VLDDPTVGGCAVAQYWLLLLHLKKKDLPAAQGLLAEATFVGNTRLDLLYYRVAENKEVAS
NIRRRLIEKCIHINPSERVFLNSLRTYCVEGEMSD
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcgtcgagggaaacgaagacttttctgagaaatgccagggaatgcatcaaa
aacaaggagtataaggaggctctcaagcactgcaaggctgttttgaagctggataaaacc
aattatactgctctggtattcattggaaaatgtgctacagaactaaatcaagccgatcaa
tctcttatggcgtacaagaaggctattgagtcagatgaaacacaacctcttgcttggcag
ggtctagctgctctctgtgaaaaggaagatgatccaaaactgaatgctgacctgtgcgaa
gtttacacaaaattacttcagttttatgaaggggaaaaaactaaatggatggaagttgca
acaaagcttgccaagttgtatgagaatcaaggtgatgccctaaaggctgctgaaaggtgg
gaggagattgctactttaactgaagataaaactgagcaatttcatatctggagtagaatt
atagagatcctggaaaagaggcaatcattgggacaagaaaatagaaacataaagttgaag
gcaatttacgagaaaattgtcacttgcgagagtttgcctgaggaattacacaaccagcta
gaaagacactttgaatgttacataaaactcttaatatcaaaactccaggctggtgaagag
caaggcctgctcaaggaggagaaaagtgaaatcaatgatgcagcaaaatctatgattacc
ctatttccaacgtccaaatttgccttggaattccaaggaaaagattttcttcattccctg
gttgctgcacccacacttgagatgtcagatttatttcaaagactgtatcacatgtatcca
gagtctagtgttggtgcaattggacttggcagtgtcttactgcatcagaaagatttttcc
gtggccatggtattattgcagaaaggtcttcagactttcagtgactgtccatatggctgg
ttgttgctttgtgaagctcaaaaaagtcttcatcgctatcaaggtgcttcaaacagtgcg
caaaaaggtcttaactgtgtaaagtgctcttctcatgatgtgaagaaaaaactgcagaga
aagcttagcttttctagagctgatgctctactgaaacaaagcccagaaggagtggtactt
gcaaaagaaatatacgaagagttgttaaaagatgttgaaggagatgaggaagtggaaatt
ctcactggtcttggaaaggtgtatcttgctcttggggatgttcctcaggcaacacaaatt
tgtgcaaaagctttgagcattgataagagttttgctggagctctggcattgcagggtgaa
ataagctttcatgaaggacattttgatgatgcagagttaaggttcttggaagcaatagaa
aagagcagagaatgtgcattttaccactttctccttggcaagctatactgggaaatggat
gaaaacctcagagcagacaagaaaaaatgcctcgttcagtttctaaaggctgcaaaattg
gaccccaattactgtccatcatttctttatttgggacattactacctcaaagttctcaag
gacgtgagtaaagccagcagatgttatcaaaaagcgtttgacctcgatccagattctgag
gacgccggggcagctttaggagattctcttacagagcttggagaagaggttgcggcactt
aacttgtacaagaatataacagcgatgtcttcccctggaaagggtaaatgggcgtggctg
cggcttggattatctcacttaaaacacaatgagagcacagaagcaatcacatgttttcag
agtgcgttgagggctgatcccaaagatagacattgttgggaatgtcttggtgaagcatat
atgagccgtggaagctacacagctgcaatgaaagcattcacaaaagccgctgaacttgat
tcatcatcgctgtattgcctttaccagttggctgccattaaacagttgttgagcgtccac
ggagaagccatcaaagagtacaagctgattctagaaatgcagcacgattacgttccagca
ctaaaaggacttggagagacttaccttaaccaggctcgtacagctattgagcaaaacttc
aatgggaaagcggtggactgtgtactagaggccgtaggtgttttggcgcgagcggttcaa
cacagacctggtctctcttgtctatggaaacttcttggtgactgttgcacgatcattcac
ccacttgcaaatgaatccctcagagggaagattccagacaacttaaggaagtatgttccg
ggtgagcccctagagtttcagcacaagaaggagtttctagctttgggatcaagcgcttat
ggaagggctttaaaattgcaaccagaatgtggaactctttggggagatctgggattcaac
tcctttcagcaagctaagattcttgatggagaagacaaaaaaaggatggcccgtagatct
cttcaggcactgaagaagggtctttcattacagccttccagtcacaagttgtggaacagc
ttaggagtggttgccgcctcagaagaaattaagaatcctgagctcagtcaacactgtttc
attatgtccattaaaacagagcctaacaatgttattgcgtggacaaatctcggagtcctg
tacgtgaagcatggaaaaatagagcttgctcatgaggccttcaagaattctcaagcgctg
gatccatcgtacgctgcagcttggatcggacaggccaccattgctgagattataggaagt
gacgaagccatggacctgtttcgacacacgacagagctgggatctcacagcgagggaaat
atcggttatgcgcactgggtttgttccagcctcctcccggacaagtcttccgagaatcac
gtgatactgaaggggcaaccagttcccactctctctcatcttcatccggagtgccgcaaa
gccgtgctgcagtctgcaactgccctcagtaaatacacagattgtataagaaacaacgct
ggtgcctttaacatgtatgggctgatactggagaaccagagactattcttgcaagcagaa
aaggcctttgaaagggcaataacattgcttcagggaagtggaagtgaggataaacaaagg
catttaaatgccgtgatgataaatcacgcgagagtgcttcgttcgttgggccgctacaag
gaatcagttgcaaggtatcaggctgtgaaaccgctgaaagagttccatgatgtgtgcggt
ctcgcgctgtcattgttcatggctagccagttaaaagaaagctataaagcctatgaacaa
gcatttcaattggctgagaccgatactgacaggtcatgtgttataacagcacttggcatg
ctgggatatgcattgaatgacaaagatgcagccaaagtgatgctttttaagagttcacaa
ttaaagcctgcttgcaatcaggggcttatggcgctatgcactctcggtctggttaatggt
gacgctacactagctggagctgcacttggtgaactgatgagagcaaatagcggaagcgaa
gtcctgaatggacacatttgttatctgtattctcgtttctacgctcttcagggaaatcag
aaactcggacgaagtcatatcatgaaagcaatccaccgaaatcctagaagcagtgtattg
tggagtcagttggcatcctatctcttgcaagcctgccctgacgaactcgaggctgcggct
tgctgctcagaatcttccgcaagacttggtgggagccactctgttgagcacaatcccgca
atccaccccgctggtattgtgggctcaggagccttgcgtaaccatgacaacaaaatggcc
cggatcggtgcttcaagcagaacgcgctcaggtctcatagcttcccagaaggctgtgcac
gcacaccctaatcacctgtcaagctgggcagttcttgcagcttcagttacagcgcacagc
atagcgagaaaccgagagaggattggaagagagcaaggcattctcggtgcaaggattgcg
aagtttgttcaggtgatagcctctgcggagataaattccttgaatcttctttgtgaaagt
caactaccagcgcttgttaattggcagactagtcaactggaatctcttcgatcctgggcg
attattcaccatggttacggctcgctttactttggaaaacttgaggacgccgctaatatc
gtggatcaggcgttgcctttgtacagctctgttcctcaaatctccactcagcttcatttc
ttgaaggcccaggtgttactggctggtgaagaacccgtggaaactggacttaatttgcta
cagacttctctgctttcgagcccaatccattcgccaaatgtctggcaggttttagctgaa
gtccaagccaatcagggctcagctacggcagcggagctttgctatcggcagtgtctgcag
gcaggaatggacagcggatcacagagctggcgagttgttcccctgatacgattggccttg
cttgctcttcgtcaagctcagagagaaaccagtgaccgagaccggtggatcagtcttgct
ttcgaagcctccagtgaggtccttaagttgaaaatagcgtttactgtggcttatttaatt
cagggaattgtctattttctgcaagataatgctagagcttcaaaaagagcacttcaacat
gttttagatgacccaacagtaggtgggtgtgctgtggctcaatactggcttctgttactt
cacctgaagaaaaaggatcttccagctgctcagggccttttggctgaagcgacattcgta
ggaaatacccggttggatttattatattatcgagttgcagagaataaagaagtcgcctcc
aatattagacgccgtctaatcgaaaaatgcattcatattaatccatcagaacgcgtgttt
ttgaattccttaaggacctactgcgtagaaggagaaatgagtgattaa
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integrated database retrieval system
