Montipora capricornis (leaf plate montipora): 138040199
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Entry
138040199 CDS
T10557
Name
(RefSeq) collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz04512
ECM-receptor interaction
mcaz04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138040199
04518 Integrin signaling
138040199
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mcaz00536
]
138040199
Glycosaminoglycan binding proteins [BR:
mcaz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138040199
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
138040199
NCBI-ProteinID:
XP_068742072
LinkDB
All DBs
Position
1:complement(35000159..35095052)
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AA seq
1398 aa
AA seq
DB search
MLPSNAVSTLLIGLSLFILVQGQDPAPTYPPVRGDPGPQGPNGDPGNQGEAGPSGDQGPQ
GYPGSPGNPGARGDPGERGVVGEPGPPGGGGVGGLSGGVKGPDPDAPGQIKGEPGEPGAR
GPPGSPGKRGPPGLAGQRGILGPPGEQGPRGRNGQPGPPGDPGQDGSDGAPGPKGDQGSA
GGQGPPGPTGIPGLAGETGFKGDKGPQGHKGNKGDQGVPGERGVSGDPGRPGIDGDPGET
GLVGELGKRGRPGPQGQRGPEGSPGDQGNPGPRGQAGAPGSPGVPGAKGDRGEPGVQGDV
GEKGEQGPSGEQGPKGENGRSGNPGRSGAPGEKGNMGPLGPTGPPGQAGAPGSAGVPGAQ
GRSGAPGDRGRAGLPGLQGEKGEKGSQGSPGPVGNSGPQGRSGRRGNPGADGPPGPSGPV
GPAGPPGPRGAPGTDGIPGQKGATGSPGENGQNGAKGDKGAAGLRGQPGQQGSKGPTGQP
GVAGRDGKSGAPGDPGIDGKPGSTGPQGSPGAPGPDGLTGSKGSMGESGADGEPGTPGPP
GAKGETGMSGRRGLTGIPGTQGRQGERGEAGAPGPQGQQGSPGSQGPPGLPGKQGETGEP
GESGTDGTPGTRGERGAQGERGAPGVMGVPGDPGDFGLSGADGKPGERGLPGTPGPVGTP
GVAGLPGQQGPMGPVGSKGSKGEVGATGERGYDGKDGEPGRDGQPGPPGQPGNPGAKGED
GVPGTDGTPGSRGDTGPRGLPGNPGPPGRPGAVGSSGPRGPQGPRGPRGEPGVKGPPGSP
GRPGATGALGQLGKPGEKGEQGNQGRTGPPGLQGDPGKPGASGPPGPPGPSGPPGRDGAD
GQKGSTGEPGRPGKDGLPGQPGSNGKDGEPGAAGTDGRPGDTGSRGPAGPKGERGTPGAT
GATGSSGPQGIQGPKGEAGPPGSNGRNGAPGIPGPRGNQGPPGPPGPAGQDGDDGANGTR
GIPGRGGLKGESGAPGDPGVAGSAGPAGPPGTKGDPGPPGIQGEKGRRGRDGTPGKTGDP
GPQGGQGPKGQQGDKGPDGEKGDKGWNGNPGQTGPQGERGELGPPGRDGVDGPPGPRGVP
GDAGDPGTEGRNGTMGEPGNKGPDGDLGDPGSPGPNGVKGPPGPPGPPGPPGAPGMSEVA
SYLAIGNLEKGPGFRLYSSGGKEIPRQDIKPDDILKSFDEKEKEIDALIAPDGTRKFPAK
TCYDLFLNHKDFKSGEYWIDPNGGTVKDAIFVYCDKKKNSSCVYPKNAKISDLILKKDYQ
SKDDKWLSEAFEKSEEVEYDAHYTQINFLRTLSNFANQNVTYSCRNSKAWKDGEHSIKLM
GSNEMEYHATSKISLRPKVITNECTGGDKLDKWGKTVLEIDTRERSRLPIVDVSAFDVGG
KDQDFKLEIGAACFHHTQ
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgttaccctccaacgcggtttcaactcttctaataggcctttcattatttattcttgta
caaggacaagatccagccccaacatacccacccgtgagaggagaccctgggcctcaggga
ccaaatggtgatcctggcaatcaaggagaggcgggtccaagtggtgaccaaggacctcaa
ggatatcctggtagtcctggtaaccctggcgcaagaggagaccctggagaacgaggtgtt
gttggagaacctggtccccctgggggaggaggagttggtggtttaagtggtggcgttaag
gggccagatccagatgcgcctggtcaaattaagggtgaacctggagaaccgggtgctagg
ggaccccctggatcacctggaaaacgtggccctcctggacttgctggccagcgggggatt
cttggtccccccggagaacaaggacctcgcggcagaaatggtcagccagggccccctgga
gatccaggacaggatggatcagatggagcgccaggaccgaaaggagatcaaggctctgca
ggtggccaaggtccaccgggtcctactggtatccctgggctggctggtgagacaggattc
aaaggagataagggaccacaagggcacaaggggaacaagggagaccaaggtgttcctgga
gaaaggggtgtctctggtgatccaggaagacctggtatcgatggcgatcctggtgaaact
ggattggtaggagaacttgggaaacggggacgaccaggaccacagggccagaggggacct
gaaggatcccctggtgatcagggtaacccgggtcccagaggacaagctggtgcacctggt
tcccccggtgttcctggagccaaaggtgatcgtggtgagccaggggtacaaggcgacgta
ggggagaaaggggagcagggaccttctggagagcaagggcctaagggtgagaatggtagg
agtggcaatcctggaagaagtggagctcctggagagaaaggaaacatgggtcctttagga
cccacaggtccaccaggacaagctggagctcctggaagtgctggtgtaccgggtgctcaa
ggaagatctggtgctcctggagataggggccgagcaggattacctgggttacagggcgag
aagggagaaaaaggatcacagggctcacctggccctgttggaaattctggtccacaaggc
agaagtggaagacgaggtaatcctggtgctgatggccccccaggaccttctggtcctgtc
ggacctgcgggtcctcctggtccacgaggtgctcctggaactgatggaataccaggccaa
aagggagcaacagggtccccaggagagaatggacaaaatggagcgaagggtgataaggga
gctgctggtcttcgcggtcagccaggacaacaaggttctaagggacccactggccaacca
ggagtggctggtcgagatggcaaaagtggagcacctggagacccagggattgatggaaaa
ccaggatccactggacctcagggatcaccaggtgcacctggtccagatggattgactgga
tcaaaaggatcgatgggtgaatcaggtgctgatggagaacctggaacacctggacctcca
ggagcaaagggtgagactggaatgtctggaaggcgaggacttactggaataccaggaacg
cagggtcgtcaaggtgagagaggagaagcaggagcccctggaccacaaggacaacaggga
tcaccaggaagccagggccctccaggcttacccggaaaacaaggagagactggagagcct
ggagaaagtggaacagatggtactcccggtaccaggggagaacgtggtgctcagggagaa
cgaggagccccaggcgttatgggtgtcccaggagaccctggcgattttggtctgtctggt
gctgatggtaaacctggtgaacgaggtctgcctggtacaccgggtccggttggaactcca
ggtgttgcggggttaccaggacaacaaggacctatgggaccagttggttccaagggatca
aagggtgaagtaggggctactggtgagcgtggatatgatggcaaagatggagaacctgga
agagatggacagccaggaccacctggtcaacctggaaatccaggagcaaagggtgaagat
ggtgtcccaggaacagatggaaccccaggaagccgcggtgacactggaccacgtggatta
cctggaaacccaggccctcctggaagacctggtgcagtgggatcaagtggcccacgtggc
ccccaaggacctcgaggaccgcgtggagaacctggcgtaaaaggtccccccggatcgcca
ggaagaccaggtgccactggggctttgggtcaactggggaaaccaggagaaaagggcgaa
caaggaaaccaaggtcgaacgggaccacctggactgcaaggagatcctggaaaacccgga
gcttctggtccacccggacctccagggccatctggacctccgggtagagacggagctgat
ggacagaagggatcaactggggaaccaggacgacctggaaaggacggcctcccaggacaa
ccaggcagtaatggcaaagatggcgaacctggagcagctggaactgacggacgaccgggc
gataccggctccaggggaccagccgggccaaagggcgaacgaggaacaccgggcgcaact
ggagccactggcagttctggaccacagggcattcagggaccgaagggagaggcaggacca
ccgggatctaatggccgaaatggagcaccgggaatccctgggcctcgaggaaatcaagga
cccccaggtcctcctggtcctgcaggacaagatggtgacgatggtgccaatggcactcgt
ggaattcccggacgaggtggtctaaagggagaaagcggcgcacccggagatcccggtgtc
gctgggagtgcaggaccggcaggtccccccggaacgaagggagacccaggaccgcctggt
attcagggagaaaagggacggcgtggacgggatggcactccaggaaaaacgggtgaccct
ggacctcagggaggacagggaccgaaaggacaacagggggacaagggaccagacggcgaa
aaaggagacaaaggctggaacggaaacccgggacagactggtccacagggtgaacggggt
gaactaggacccccaggaagagatggtgtagacgggccaccaggtccaaggggtgttcct
ggcgacgcgggagatccagggacagaaggaagaaatggcacgatgggtgagcctggtaac
aaaggtcccgatggtgatctgggtgatccaggttcaccgggtcctaatggtgtgaaagga
cctcccggtccgcctggcccaccaggacccccgggagcgcctggcatgtcggaggttgct
agctacttggcgataggaaatcttgagaaaggccccggattccgactctactctagcggt
ggaaaggaaattccaaggcaagacatcaagcccgatgacatcctcaagagctttgacgaa
aaggaaaaagaaatcgacgctctcattgctcctgatggtacaagaaagttccccgccaaa
acgtgttacgatctatttctcaatcacaaggacttcaagagcggtgaatactggatcgat
cctaacggcggaacagttaaagatgccatctttgtgtattgcgacaaaaagaagaactcg
tcatgtgtctacccgaagaatgcaaagatctcagacctcattctcaaaaaagattaccaa
agcaaggatgacaagtggctcagcgaagcgttcgagaagagcgaggaggttgaatacgac
gctcattacactcaaatcaattttctgaggactttaagcaacttcgccaaccaaaatgtc
acctattcctgccgtaactccaaagcgtggaaagatggagaacattcgatcaaacttatg
ggatccaacgaaatggaataccatgccacttccaagatttccctcaggcctaaagtcatt
accaacgaatgcacgggaggagacaagttagacaaatggggcaagactgtcttagagatt
gacaccagagagaggagtcggctaccgatcgtggatgtatcggcttttgacgtcggtgga
aaggaccaagattttaagcttgagatcggagcggcttgcttccatcacacacagtga
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