Montipora capricornis (leaf plate montipora): 138042797
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Entry
138042797 CDS
T10557
Name
(RefSeq) paired amphipathic helix protein Sin3a-like isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
mcaz
Montipora capricornis (leaf plate montipora)
Pathway
mcaz04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
138042797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcaz03036
]
138042797
Chromosome and associated proteins [BR:
mcaz03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
138042797
REST complex
138042797
Heterochromatin formation proteins
Other heterochromatin formation proteins
138042797
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
ORC4_C
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
138042797
NCBI-ProteinID:
XP_068744908
LinkDB
All DBs
Position
3:complement(28881407..28923115)
Genome browser
AA seq
1248 aa
AA seq
DB search
MKRVRPEDHDGVYGQNRQSFRPPPVLAPAPVGMTTNYEQLQQDGLSGLTQFPAAAQMAAA
PGFQVQSPNPQAHSHVQNPSSGHHQGQGQVHAQAQAQGQQQQFQRLKVEDALSYLDQVKL
QFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSSLFKGHPELIVGFNTFLPPGYKIEVH
ASDPGTVSVTAPNGQSQITTILQPNQNQHPTHQSSGHQGQQQQQSQPKQPQQPQQQPLQS
PTAQQGQGQQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQKNIKEAAMQGT
PLSEQEIYMREAKLANEVYKQVAQLFQNQEDLLQEFSQFLPDANGAATMPGALLSSSKLQ
SHLSSARNEYAPPAKKPAVGPNSSKRIAHQIRRNSNSISSSPTHPQAKKKSRSAIKDVTL
AEAQKIGTFSEFAFFEKVRKALKNAELYNNFLRCLVLFNQEVISRAELVQLAANFLGKYP
ELFQWFKEFLGYKDSSPMESVASFKERTSGELHHLEIDYSSCKRYGTSYRALPKSYTQPK
CSGRTALCREVLNDTWVSFPSWSEDTPFPGTRKTQYEEYIFRCEDERFELDVVLESNLST
IRVLEAIQKKLQRMPAEEQAKFRLDSCIGGTSEFIHRKAIQRIYGDKAPDIVDGLKKTPA
VAVPLVLKRLKTKEEEWRESQRQFNKIWRDQNEKYYLKSLDHQGITFKQNDLKSMRSKSL
INEIETIYDERQEQAAEGNGDATGPHLMYTYQDKSILDDAAGLIVHHMKRQTSIHKEDKA
RIKVLLHYFLPDLFFAPRGELSDDEDSVKELNGLGKPELTNGLPEAEADDAYNLIYVNNN
WYLLFRLHQMLCERLLKMYQQSVMIAEGEASDKQQRKQATAIALRLKAPSEIDLEEYYPA
FLDMIRNLLDGNMDSTNFEDTCREMFGVHAYIAFTMDKLVQNIVRQLHNIVTDEICSQVT
ELYQQEQGNLATGGSSATQHTRAPGEAAYQKRAESLLSDENCYKVVIHKDKNICRLSLEL
LDTDDSHSEDPVEVEKWNEYVEKFVGSEEVSTEVKDHLQTKPIFLPRTVRSNSRMKSATP
SNEKESTTNDNGSSTDEAESEGNNSEKEEENDEVEDMEVENSMECKLSLNSYKIRFVKGS
EDYLYRRQALKRAKESHPSVANRLHTRFQAWLSKWVESNVSSDQESRCRDWLLGRIDGLH
PCTTTCDTIANAVIKHNKYSVKWEENRRDKQQEVGQPANKDGEQNPAS
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggtccgtcctgaagaccacgatggcgtatatggtcaaaacaggcagagtttc
cgccctccccctgttcttgccccagcccctgttggcatgacgaccaattatgaacagctt
caacaggatgggttgagtgggcttacgcaatttcctgctgctgctcagatggcagcggct
ccagggtttcaagttcaatcaccaaatccacaggcacattctcatgtacagaacccgtcc
tcaggacatcatcagggccagggtcaggttcatgcacaggcacaggctcagggacagcaa
cagcaatttcaaaggttaaaggttgaagatgctctgtcatatttggaccaagtcaagctg
cagtttggtaaccaacctcaggtttacaatgattttctggatatcatgaaagagtttaaa
tctcaaagtatcgacactccaggcgtcattagcagagtttcgtcgctcttcaagggtcat
cctgaacttattgtgggtttcaatacattcctccctcctgggtacaagattgaagtgcat
gccagtgacccaggaactgtgtcagtcacagctccaaatggacaatcacagatcacaacc
atccttcaacctaatcaaaatcagcatcctacccatcagtctagtggccaccaaggacag
caacaacaacagtctcagccaaaacaaccccaacaaccacaacaacagcctctacagtct
ccaacagctcagcaaggacagggtcaacagccagtggagttcaaccatgccattaattat
gttaataagataaagaatcgattccaaggacagcctgacatctataaggctttcttagaa
attcttcacacataccaaaaggagcagaaaaatatcaaggaggctgccatgcagggaacc
cctctctctgaacaagagatttatatgagagaggctaaacttgcgaatgaggtttataaa
caagttgcccagttgttccaaaatcaagaggatttgcttcaagaattcagtcagttcctt
cctgatgcaaatggtgctgcaacaatgcctggggctttactgtcatcaagtaaactacaa
tctcatttatcttcagcaagaaatgaatatgcacctcctgcaaaaaaaccagcagtgggt
ccaaattcatcaaagcgcattgcacaccagattcgaagaaattcgaacagcatttcgtcg
tctcctactcatcctcaagctaagaagaaatcaagaagtgctatcaaagatgttaccttg
gcagaagcacaaaaaattggaaccttttcagagtttgcattctttgaaaaggtgaggaaa
gctcttaaaaatgctgaactttacaataatttccttcgttgtcttgtcctgtttaaccaa
gaagtaatatcaagagcagaacttgtgcagttagcagctaacttccttggaaaatacccg
gagctattccagtggttcaaggaatttcttggttacaaggactcctctcccatggagagt
gtggcaagcttcaaagaaagaacatcaggagaattgcaccacctcgaaatcgactattct
tcgtgtaaaagatatggtacaagttacagagctcttcccaaaagctacactcagcccaag
tgcagtggtcgtacagctctttgtagagaagttctcaatgacacctgggtgtcttttccc
tcttggtcagaagacaccccttttcctgggacaagaaaaactcaatatgaagagtatata
tttaggtgtgaagatgaaagatttgagttggatgtagtgttggaatcaaatctttctact
atccgagtcttagaagccatacagaaaaagcttcaaagaatgccagctgaagaacaggca
aaattccggcttgacagctgtataggtggaacctctgaattcatccacaggaaagctatt
cagaggatttatggagacaaagcccctgatatagttgatggtttaaagaaaacacctgca
gtggctgtaccacttgttcttaaaaggctaaagaccaaagaagaggaatggcgagagtct
cagaggcagttcaacaaaatatggagagatcagaatgaaaaatattatctcaagtctttg
gatcatcaaggcattacatttaagcagaatgacttgaaatctatgagatcaaagagcctt
attaatgaaatagagactatttatgatgagcgacaagaacaagctgcagaaggtaatggg
gatgccacagggccccacttgatgtacacctatcaggacaagtctatactggatgatgca
gctggacttattgttcaccacatgaagagacaaaccagtatccataaagaggacaaagcc
aggattaaagtgcttctgcactacttcttgccagacctcttttttgcacctagaggtgaa
ctgagtgatgatgaagactctgtaaaggaactcaatggtcttggcaaacctgaactgacc
aatggattaccagaagctgaagcggatgatgcttacaacttaatatatgtaaataacaat
tggtatctactcttcaggcttcatcagatgttgtgcgaacggctgttaaagatgtaccag
cagtcagtcatgatagctgaaggtgaagcttctgataaacaacaaagaaaacaagccaca
gctattgctttgagattgaaagcacccagtgaaatagacttggaggaatactatcccgcc
tttttggacatgattagaaacttgctggatggtaacatggattccacaaactttgaggat
acctgtcgggagatgtttggtgtacatgcctacattgcatttactatggacaagttggtt
cagaacattgttcgacagctccacaacattgtaacagacgagatatgtagtcaggtgact
gagttgtaccagcaggagcagggtaacctagcgactggaggaagctcggccactcagcac
actcgcgcacctggagaagcagcttatcagaagagagcggaatccctgttgtccgatgaa
aactgttataaagtcgtcattcataaggataagaacatttgccggctgagtcttgagttg
ctggatacagatgattcccactcagaggatccggtggaggtggaaaagtggaatgaatat
gtggagaagtttgttggcagcgaagaggtttccacagaagttaaggatcatttacagaca
aaacccatcttcttgccaaggactgtgcgctccaattcgcgaatgaagtccgccacccca
agcaatgaaaaagaatcgacaacaaatgacaatggctcttcaactgatgaggctgaaagt
gagggaaataacagcgagaaagaggaagagaatgacgaggttgaagacatggaagtggag
aactccatggaatgcaagttgagcttgaactcgtacaagattcgctttgtgaaaggaagc
gaagattacctgtacaggcggcaggctttgaaaagagcgaaagagtcccatccatcggta
gcgaaccgccttcacaccagattccaggcctggttaagtaagtgggtggaaagcaatgtt
tcaagtgaccaggagagtagatgccgtgactggctccttgggcggatagatgggctccat
ccctgcaccacaacttgcgacacgatcgcgaacgcggtcattaaacacaacaaatactcc
gtaaaatgggaagagaacagaagggacaaacaacaagaggttggacaaccggccaataag
gatggcgaacagaatcccgcctcatag
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