Montipora capricornis (leaf plate montipora): 138043019
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Entry
138043019 CDS
T10557
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03020
RNA polymerase
mcaz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
138043019
09124 Replication and repair
03420 Nucleotide excision repair
138043019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaz03021
]
138043019
03400 DNA repair and recombination proteins [BR:
mcaz03400
]
138043019
Enzymes [BR:
mcaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
138043019
Transcription machinery [BR:
mcaz03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
138043019
DNA repair and recombination proteins [BR:
mcaz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
138043019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
138043019
NCBI-ProteinID:
XP_068745219
LinkDB
All DBs
Position
3:36798969..36822914
Genome browser
AA seq
1180 aa
AA seq
DB search
MYDPDDDVGYGEDEGEEITRDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPEIDLQAESLHMTADTETPPRFLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLT
YSAPLYVDITKTMIKEDEDPAVTQHNKMFIGKIPIMLRSTYCLLNNLNDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSKKDSKYSFTAEIRSCLEHSSRPTSTMWVSM
LAKGSQGGRKSAIGQRIVGTLPYIRQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVIQEQNVALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRMYA
QKFIDRGKDFNIELALKPKVITDGLRYSLATGNWGDQKKAHQSRAGVSQVLNRLTFASTL
SHLRRLNSPIGREGKLARPRQLHNTHWGMICPAETPEGHAVGLVKNLALMAYISVGSQPS
PILEFLEEWTMENLEEITPSAINNATKIFVNGCWVGIHRDPDQLMSTLRKLRRQMDIIVS
EVSMVRDFREKEIRIYTDAGRICRPLLIVENQRLLLRKHHIDQLKEREYNDYSWQELVAG
GIVEYIDVNEEETVMVAMTPDDLMVEKGQAYCSTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNYHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINA
IAAIASYTGYNQEDSVIMNASAIDRGLYRSVFYRSYRDQESKRGMDQEETFEKPTRDTCQ
GMRNAVYDKLDDDGLISPGTRVSGDDVIVGKTVTLPENDDELEGTTRRFCKKDSSTFLRP
SETGIVDQVMVTINQEGYKFTKIKVRSVRVPQIGDKFASRHGQKGTCGITYRQEDMPFTV
EGITPDVIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSQLLNDY
GYHLRGNEVLYNGFTGRKLNAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILTRQPMEGR
SRDGGLRFGEMERDCMIAHGAAQFLNERLFEVSDPYSCHVCNLCGLIAIANLRNNTFECR
GCKNKTQVSRIRMPYAAKLLFQELMSMSIAPRMMVCEPVK
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatcccgatgacgatgttggttatggagaggatgagggtgaagaaatcacccga
gatttgtggcaagaagcgtgctggattgtcatcagttcttattttgacgaaaaaggtctt
gttagacagcagttggattccttcgacgaattcattcaaatgtctgtgcagagaattgtt
gaagactctcccgaaatagatctgcaagctgaatcacttcacatgactgcagatacagaa
acaccaccaagattcctgctcaaatttgaacaaatctacctttctaaaccaactcattgg
gagaaggatggtgctcctagccctatgatgccaaatgaagctagacttaggaatttaact
tattcagctcctctttatgttgatatcaccaaaactatgatcaaagaagatgaagatcct
gctgtgacacaacacaataaaatgttcattggaaaaataccaatcatgctccgctccaca
tactgcttgttgaataacctgaatgatcgagatttaacagaactcaacgaatgtcctttg
gaccccggtggttattttattatcaatggatctgagaaagtacttattgctcaagagaaa
atggccactaacactgtttatgtcttctccaagaaagactcaaagtattccttcacggca
gaaatccggtcttgcttggaacattcctcacgtcccactagtaccatgtgggtgtcgatg
ctagctaaaggaagccagggaggccgcaagagtgccattggacagcgtattgtaggaact
ttgccatacatcagacaagaaattccaatcatgattgtgttcagagccctaggttttgtg
gctgatcgagatattctggagcacattatttatgattttgatgatccagaaatgatggaa
atggtaaaaccatcattagatgaagcctttgtgattcaagagcagaatgtagctctaaat
ttcattggatctcgtggtgcgagacctggtgtaactaaagagaaacgtatcaagtatgca
agggaaatccttcaaaaggaaatgctgcctcatgttggtgtcagtgacttttgtgaaaca
aagaaagcatactttttaggctacatggtgcacagactgttgttagcagcacttggtagg
agagaacttgatgaccgtgatcactatggcaacaagcgacttgacttggcagggcctttg
ctggcctttctctttagagggttgttcaggaaccttatgaaagaagtgagaatgtatgca
cagaaatttattgacagggggaaggacttcaacattgaattagctctcaaaccaaaagtc
attacagatggattgaggtactctttggcaacaggaaactggggtgatcaaaagaaagcc
catcaaagtcgtgcgggtgtgtcacaggttctcaacagactgacgtttgcatccacacta
tctcacttgcggcgtctgaactctcctattggacgagagggtaaactggctcgtcccaga
cagctgcataatacccattggggtatgatttgccctgcagagaccccagagggtcatgct
gtgggactggtgaagaatctggctttgatggcctacatttccgttggctcacaacccagt
cctatcttagagtttttagaggagtggactatggagaatttggaggaaatcacaccatca
gccatcaacaacgcaaccaagatttttgtcaatggttgttgggtagggatccatagagat
ccagatcagctaatgagtacacttcgaaaactccgaaggcaaatggatatcattgtttct
gaggtttccatggtgagagatttcagagaaaaagagattaggatctacacagatgctggg
agaatttgtcgaccactgttgattgtggagaatcaaagattgttgctaaggaaacatcac
attgatcagctaaaggagagggagtacaacgactacagctggcaagaattagtagccggt
gggattgtggaatacattgacgtgaatgaagaggagacagtgatggttgccatgacacca
gatgacctgatggtagagaagggacaagcctattgctcaacttacacacactgtgaaatc
caccctgcaatgatccttggagtctgtgcatcaattattccattccctgatcacaaccag
tctcctcgtaacacgtatcagtctgctatggggaaacaagccatgggtgtttacatcaca
aattatcatgtacgcatggatacgcttgcgcatgtgctgtactaccctcagaagccactg
gtaaccacccgctccatggagtatctcagattcagagaattgcccgctgggatcaatgcc
attgcagcgattgcatcttacacgggttacaatcaggaggattccgtcatcatgaatgct
tcagctattgacaggggattgtacagatccgtgttttaccgctcataccgcgaccaggaa
tcaaagagaggtatggaccaagaagaaacatttgaaaaaccaacgagggatacatgccaa
ggcatgcgtaatgcagtgtatgataaactggatgatgacgggctcatttctcctggtact
cgcgtgagtggtgatgacgtcatagttggcaagacagtaacattacctgaaaacgatgac
gagctggagggaacaactcggcgcttttgcaagaaggactcaagcacctttcttcgcccg
agtgaaacaggcattgtggatcaggtgatggtgacaatcaaccaagagggatacaagttc
actaaaataaaggttcgttcagttcgtgtccctcaaataggagacaagtttgccagtcga
catggtcagaaggggacttgtggaatcacatatcgacaagaggacatgccattcaccgtt
gaaggaatcacccccgacgtgataatcaatcctcatgccattccgagccgtatgacaatt
ggtcacttgatcgaatgtcttcaaggaaaggtatcagctaacaagggtgagattggagat
gccacgcccttcaacgacgctgtgaacgtacagaaagtatcgcaacttctcaacgactat
ggatatcatctccgaggtaacgaggtcctatataatggatttacgggaagaaagctgaac
gctcaggttttcttgggtccaacttactaccagcgtctgaagcacatggtggatgacaag
atccactcccgagccagaggtcctgttcagattcttacgaggcagcctatggaaggtcga
tcacgtgacggtggtcttcgtttcggtgagatggagcgcgattgcatgattgcgcatggt
gcagcacagttcctgaatgagcgactctttgaagtatctgatccgtacagttgtcatgtc
tgtaacctctgtgggctcatcgccatcgccaacttacgaaataatacatttgaatgcaga
ggatgcaaaaacaaaacacaggtgtcccgtattcgaatgccgtacgccgcgaagctgctc
ttccaggagctgatgtctatgagcatcgcaccccggatgatggtctgtgagccagtcaaa
tga
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integrated database retrieval system
