Montipora capricornis (leaf plate montipora): 138043609
Help
Entry
138043609 CDS
T10557
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138043609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaz03019
]
138043609
03012 Translation factors [BR:
mcaz03012
]
138043609
Enzymes [BR:
mcaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138043609
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
138043609
Translation factors [BR:
mcaz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138043609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_19
nSTAND3
AAA_22
ResIII
ATPase
dsrm
AAA_25
TsaE
PhoH
Cas3-like_C_2
NACHT
AAA_7
Motif
Other DBs
NCBI-GeneID:
138043609
NCBI-ProteinID:
XP_068746071
LinkDB
All DBs
Position
1:complement(40269424..40292584)
Genome browser
AA seq
1132 aa
AA seq
DB search
MAHSRGFNRRPGRNFQPRFIPPFQAKSPPPLMRATPPSFEARPRMPFASDFVIGGGALQN
SYPPEKPQSFVRQIGKSAIKKPAHICVGFEASQRFPTAKEKLHNVLQGAMKGHSLTFNCQ
EMGQFWQATVRIPWPREMSFYAEGPTRKEAEKNAAALACVELERMGAANISSAAVIKKEA
VQSMDEPKWIYINEEQLSKVESFLIKNSVLSQQLYRNHLQPVHRPCPRVVSASEGRALGE
SSSGTSSNMSASQINVDAKFWKDSNPQDADFSSWDMPHTIEMASSENGQSLATIDNNYSP
VTCVVKDIFSGLPWNELKAEESAKLNEQLLREFNQRQRMLERRMSWFNEPPNKLPVLDHR
KRIVDLIEENKVVVLSGETGCGKTTQIPQFILDNAVKNGRGSSCNIVVTQPRRIVAMSIA
ERVAWERGEVLGKSIGYQVRLEGVPPTQRGRILFCTTGIILRRMQNNALLQGVSHVIVDE
VHERDINTDFLLILLKMLLQKSQELKVVVMSATVNSDRFSQYFYGCPSLTIPGFTHSVTE
YFLPDVHQMLGGIPTAFSSPPQYKKFKSSHHFAKVQSDTVTPEADTELVCETILYVCRNY
QEGAVLCFLAGWDEISVVHDMLSSKISNAQKSQYLVLPLHSMLPMFNQREVFERPPVGVR
KIVLATNIAETSITIDDVVYVINAGNEKEKIYDAANKVSCLTTHWTSQASVIQRRGRAGR
CKPGFCFNLFSKEQFENMARYQTAEMQRTSLEEIVLQTKIQCSDDSCNVKDFLSQALDPP
SPFSVQSAISELKEIGAMDYQEDLTTLGRHMAYLPVEPRIGKMIIYGAIFRCLDPVLTIA
AGLSYKDPFVTPFSCREQADQSRKEFARGSKSDHVALLNAYNGWAEAISQSRGKEFVDQR
FLHWGTLNMIRGMRDQFIRLLEESGLVRSFGSGHSLNTFGSNLELVKAVLCAGLFPNTVK
VGLGIESKGRCGKKRVRVSFRTKTDARVLLHPSSVNSDEKQFSSQWLMYNDKIKSTQVFI
RDSSMVHPVALMCLSGKDVRELVHEKRHGLSQSLQQPRVTLAVDGDRWMAFHCSPRLARV
LQTIRDDINKMVSCNISSACSNTALFHHHTQLIETLTLLLTLPFQESLPNTH
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggcgcactcaagaggattcaatcggcggcctgggaggaatttccaacctaggtttatt
ccaccatttcaagcaaagtctcctcctcccttgatgcgagcgactcctcctagtttcgag
gccagacctcgcatgccttttgcgtctgattttgtaattggtggaggtgccctccaaaat
tcttatcctccggaaaaacctcaaagttttgtacgtcaaatcggaaagtcggctatcaaa
aaacctgctcatatttgtgttggttttgaggcttcgcagagatttccgaccgccaaggaa
aagctacacaatgtccttcaaggtgccatgaaagggcattcattgacatttaattgccaa
gaaatgggtcagttttggcaagccaccgtcaggattccatggccaagggagatgtcgttt
tatgccgaaggtcctacaagaaaagaagcggagaaaaatgcagcagcgcttgcttgtgtt
gagttggaaagaatgggagcagcaaacatcagttcagcagcagttataaaaaaagaagct
gtccagagcatggatgaacccaagtggatttatattaatgaggagcaactctccaaggtg
gagtcttttctgatcaagaatagtgttcttagtcagcaactgtacaggaaccatcttcag
ccagttcatcgaccatgccctagagtagtaagtgcttcagaaggtagagcattgggtgaa
tcttcttccggtacctccagtaacatgtctgcttcacagataaacgtagatgcaaaattc
tggaaagattccaatcctcaagatgcagatttttccagctgggatatgccacatacaata
gagatggcaagctctgaaaatggccaaagtttagcaactatagataataattattctcct
gtcacctgtgttgtgaaagacatatttagtggcctaccttggaacgaattgaaagcagaa
gaaagtgctaaacttaatgaacagttgttgcgagaatttaaccaaagacagcgtatgttg
gagaggagaatgtcatggttcaatgaacccccaaacaaattgcctgtcttagatcacagg
aaaaggatcgttgatttaattgaggaaaacaaagttgttgtattatctggagaaacaggc
tgcggcaaaaccacacagatccctcagttcattctagataatgctgtaaagaatggcaga
ggatcaagctgcaacattgtagtgacacagccaaggcgtatagtagcaatgtcaattgcg
gaaagagtggcctgggaaagaggagaagtcctgggaaagagtattggttatcaggtgagg
ctagaaggcgtacccccaactcagaggggtcgaatcttattttgcactacaggaattata
ttgagacggatgcagaataatgcccttttacaaggtgtcagtcatgtcattgttgatgaa
gtacatgagcgagacatcaatacagatttcctgttgatcctcttaaagatgttgctccaa
aagagtcaagaactgaaggtggttgtgatgagtgcaactgtgaattcagatagattttca
cagtacttttatggctgtcccagtttgacaattcctggtttcacacattctgtaacagag
tattttttgcctgatgttcatcaaatgttgggtggaataccaacagcattttctagccca
ccacagtacaagaaattcaagtccagccaccattttgcaaaggtgcaaagtgatacagtg
actccagaggctgacactgaacttgtctgtgaaactattctgtatgtatgcagaaactac
caagagggagctgttttgtgctttttggctggttgggatgaaatcagtgttgttcatgac
atgttgtcatcaaagataagcaatgcacagaaatctcagtatcttgtgctgccacttcac
tctatgcttcctatgtttaatcaaagagaagtgtttgaaaggccccctgttggagtccgc
aagatcgtgttggcgaccaatatagcagagacttcaatcacaattgatgatgtggtgtat
gtcataaatgctggaaacgaaaaagagaaaatatatgatgcagccaacaaggtatcctgt
ttaactacccactggacttcgcaggcaagtgttatccagagacgaggcagagcggggcgg
tgcaagccgggtttctgtttcaacctcttctcaaaggaacagtttgaaaacatggcccga
taccagacggctgaaatgcagaggacgtcgttggaagaaattgtcctgcagacaaagatt
cagtgctcagatgattcctgtaatgtgaaagactttttgtcccaggctctcgatcctcca
tcaccattttccgtacaaagcgctatatcagaattgaaggaaatcggagcaatggattat
caggaagatctaacaaccctcgggagacacatggcttatttaccagttgaaccgcgcatt
ggcaaaatgatcatctatggtgctatctttaggtgcttagatccagtattgacgattgct
gcgggccttagttacaaagatccgtttgtgacaccgttcagctgtcgagaacaggctgat
cagtctcgtaaagaatttgcacggggcagcaagagtgatcacgtggcactattgaacgct
tacaatggatgggcagaagccataagtcagtcacgtgggaaagagtttgttgatcagcgg
tttcttcattggggcacgctcaacatgattcgtggtatgcgagatcaatttatccgactt
ttggaagagtcgggccttgttcgcagctttggcagcggtcattcgctcaacacttttggt
tcaaatttggagcttgttaaggctgtgctatgcgctggactttttccgaatacagtgaaa
gttggtcttggtatagaatcgaagggaagatgcggaaagaagcgtgtcagggtctccttc
cgcaccaaaactgatgctcgcgttttacttcatccttcttcggtgaactctgatgagaaa
caattttccagccagtggttgatgtataacgacaagattaaatctacgcaagtcttcatc
cgggacagtagcatggttcacccagtggctttgatgtgcttgtctggaaaagatgttagg
gaattagtgcacgaaaaacgacatggcctctctcagtcacttcagcagcctcgagtgacc
ttggctgtggatggtgaccgctggatggctttccattgttcaccaaggctcgccagggta
ttgcagaccatccgagatgacatcaacaagatggtgtcttgcaatatctcatcggcctgt
tcaaatactgcattattccatcatcatactcagttgatcgaaactctaaccctgctctta
acattaccatttcaagaatctcttccgaacactcactga
DBGET
integrated database retrieval system
