Montipora capricornis (leaf plate montipora): 138043936
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Entry
138043936 CDS
T10557
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138043936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaz03019
]
138043936
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138043936
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
138043936
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
138043936
NCBI-ProteinID:
XP_068746567
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All DBs
Position
3:72153154..72157626
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AA seq
193 aa
AA seq
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MVSIDENPVAIPGERLGSLEQFTPGNGTYIRHGYVFASLAGYKQLQEQQNGEKPVISVTR
EEEKHVVPEVGSVVTCKVISTNPRFCKVAILGVESTSLKESFKGTIRKEDVRATEKDKVE
MYKSFRPGDIVLARVLTLHTQTYLLSTAENEFGVVFAKSEAGAAMVPVNWCEMQCPKTRA
KEYRKVAKVHEAS
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggtttccatagacgaaaaccccgttgccatcccgggagaaagattagggagtttagag
caatttaccccaggtaatggaacttatattcgccatgggtatgtgtttgcaagtctcgcc
ggctacaagcagttacaagaacagcaaaatggagagaaacctgttatttctgtcacaaga
gaagaagaaaagcatgtggtacctgaagttgggtcagttgtcacttgcaaggtaataagc
acaaatcccagattctgtaaagtggcaattcttggagtggagtcgacatctctgaaagaa
tcattcaaaggaacaataaggaaggaagatgtcagagctacagaaaaggacaaagttgag
atgtacaagtcatttcgccctggtgatattgttttagctcgtgtcttaactcttcataca
cagacatatctcctgtcaacagctgaaaatgaatttggagttgtatttgccaagagtgaa
gctggagcagcaatggttccagtgaactggtgtgagatgcagtgccccaaaacaagagct
aaggaatacagaaaggttgctaaggtccatgaagcttcttga
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