Montipora capricornis (leaf plate montipora): 138044498
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Entry
138044498 CDS
T10557
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138044498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaz03019
]
138044498
Enzymes [BR:
mcaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
138044498
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
138044498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
CbiA
ATP_bind_1
AAA_24
MMR_HSR1
TniB
AAA_16
Motif
Other DBs
NCBI-GeneID:
138044498
NCBI-ProteinID:
XP_068747119
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All DBs
Position
1:complement(6714826..6736533)
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AA seq
460 aa
AA seq
DB search
MKYCRRLFASKHEQGLGRLLLKRLRISLTLKEMEVEQEKAPQEERQQFKLEKDTELRLEI
PEGKGKAELVLLQGQAEVFGTELIRNKRFTFIAGSKVAVFTWHGCTVEISGPPEWSYVSK
ETPMVMYLNLHMALEQMRQKVENTESDIGPRVMVVGPGDVGKSTLCQLMLNYAVRMGRRP
VFVDLDVGQGYVGIPGTMGALLIERPADIEEGFPLQAPLVYHYGHLSPAPNEKLYNKVSS
TIAEVTKQRFEKNKKARVSGCIINTCGWVTGTGYRILVHAAEAFEVNVIVVLDQERVYND
LKKQFGNKVQIVHLPKSGGVVVRSQETRRTSRDDRVRGYFYGKKMNFYPHIFEVKFADIK
IFKIGAPAVPDSCLPLGMSPEQNETKLVAVQPGRDLKHCVLALSAAESLEEDLVTTNAIG
FVVVNDIDLSRQVMVVLSPAPRPLPRKFFLLSDVKFMDFK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaagtactgtagaagactctttgcttctaaacatgaacaaggcctcggaagactgtta
ctgaaacgtctccggatctcattgaccttaaaggagatggaagttgaacaagaaaaggcg
ccacaagaggaaagacagcagttcaagcttgagaaggacacagaattaagacttgaaatt
cctgaagggaaaggaaaagcagaacttgtgctgcttcaaggtcaagctgaagtatttggg
actgagttgatcagaaacaagaggtttacattcattgctggatcaaaggttgcagtgttt
acctggcatggctgtactgtagaaatctctggcccacccgaatggtcttacgtgtccaag
gaaacccctatggttatgtacctcaatcttcatatggccctggaacaaatgagacaaaaa
gtggaaaacactgaatcagacattgggcccagggtgatggttgttggcccaggagatgtt
ggaaaatccaccctctgtcaattgatgttgaattacgccgtcaggatgggaagaaggcct
gtgtttgttgatcttgatgtgggacagggttatgttggaattcctggtactatgggtgca
ttgttaattgagagacctgcagacattgaagaaggttttcctttacaagccccacttgtg
tatcattatggtcatctctcacctgcgcccaacgagaagctgtacaacaaagtgtcaagt
acaatagctgaggttacaaaacagagatttgaaaagaacaaaaaagcacgtgtaagtggc
tgtattatcaatacctgtggatgggtgactggaactggttacagaatcctggttcatgca
gctgaggcatttgaagttaatgtaatagttgtccttgatcaagaaagagtttacaatgat
ctcaagaaacagttcggcaacaaagtccagatagtacatctgccaaagtcaggaggggtg
gtggtgagaagccaagaaacgcggcggacgagcagagatgatagagtcaggggttatttt
tacggcaagaagatgaatttttatcctcacatttttgaagtcaaatttgctgatatcaag
atttttaaaataggggctccagctgttcctgattcatgccttccactggggatgtctcca
gaacagaatgaaaccaaacttgtagccgtgcaaccagggcgtgacttgaagcattgtgtg
ctagctctgagtgcagctgaatcattagaagaagacctagtcacaacgaacgcaattggc
ttcgtcgtcgtcaatgatattgatttgagtcgacaggtgatggtagtgttatcccctgct
ccaagacctttgccaagaaagttttttctacttagtgacgtcaaatttatggacttcaaa
tga
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