Montipora capricornis (leaf plate montipora): 138045010
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Entry
138045010 CDS
T10557
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138045010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaz03019
]
138045010
03012 Translation factors [BR:
mcaz03012
]
138045010
Enzymes [BR:
mcaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138045010
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
138045010
Translation factors [BR:
mcaz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138045010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
138045010
NCBI-ProteinID:
XP_068747470
LinkDB
All DBs
Position
4:complement(2134334..2151975)
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AA seq
572 aa
AA seq
DB search
MVQFQSMKYFSANECIGVTRYSPKTITTLQNVYMEKIDLDLVVSVVTYISLHMEEGAILV
FLPGWDDISKVHDKLKIIIPYIPXCPSANQREVFDRPPKGVRKIVIATNIAETSLTIDDV
VFVVDGGKVKEKTYDVSNKIACLQPVWISKASSRQRRGRAGRVQPGYCFHLFTKFHADAL
EDYQLPEMLRTPLEELCLQIKILKLGMISPFLTKALQRPEEKAVSNALEVLHQLNALDAN
EELTPLGYHLAALPVDPRVGKMILFGAIFSCLDPVLTVASVLGFKDPFVSPLGKQKEAEV
ARSNFAGDTRSDHLALLKAFQGWEQALRQRREREYCWRNFLSGNTMKMIRDMKQQFSSLL
REIGFLDSADPKAPAANQNSENLKLVKAVLCAGLYPNVARIEHHRTFRRPPILRTHEDGR
VYLHPKSVNAQVTSFEDNFLIYHEKMKSSSLFLYDSTMIAPFPLLFFGGDISVFEEEGHE
TVAVDEFIKFKSPTRIANLVKELRVELDKLLKQKIAQPKMKLSAGTGAGSKEIALLRAII
DLITSEENKTWRTQEALVDDSREMRFFKENRG
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggttcagttccagtccatgaaatattttagtgccaatgagtgcattggtgtcaccaga
tattctcccaaaacaatcacaacgcttcagaacgtgtacatggagaagattgacctggat
cttgttgtcagtgttgtcacctacatctctcttcacatggaggaaggagccatacttgtt
ttcctgcctggatgggatgatattagcaaagtgcatgacaagttgaagattatcattcct
tacattccatgatgcccatcagcaaatcaaagagaggtttttgaccgtcccccgaaaggt
gtcagaaagattgtcattgccaccaacattgctgaaaccagccttaccattgatgatgtt
gtctttgtggtagatggtggcaaagtgaaagaaaagacttacgatgtaagcaacaaaatt
gcctgtttgcaaccagtgtggataagcaaggcttcctctcgacaaaggagaggtcgtgct
ggaagggttcaacctggctactgctttcacttattcactaaatttcatgccgatgcattg
gaagattatcagctgcctgagatgttacgcactccacttgaagaactgtgtcttcaaata
aagatcctcaagcttggtatgatcagtcctttcctgaccaaagcattacagcgaccagag
gaaaaagcagtttctaatgcgttggaagtacttcatcaactgaatgctctggatgcgaat
gaagagctgaccccacttggatatcacctagctgctttaccagtggatccacgagtcggc
aaaatgattttatttggtgcaatattttcctgtttggacccagtgctgacggtagcgtcc
gttttgggtttcaaagatcctttcgtttctccactgggtaagcagaaggaagcagaagta
gcccgctcaaattttgctggtgatacgcgtagcgatcatttagctttattgaaagctttc
cagggatgggagcaagcattaaggcagagacgtgaaagggaatactgctggagaaacttt
ctttctggaaacaccatgaagatgataagagacatgaagcaacagttttcttcgcttctt
cgtgaaataggtttccttgactcagcggatccaaaagcccctgccgccaatcaaaactca
gaaaatctaaagctcgtgaaagctgtcctgtgtgcagggctatacccaaatgtcgcaaga
attgaacatcatcgaacatttagaaggccaccaattcttcgaacccatgaagacggtcga
gtgtatctgcaccccaaatcagtgaatgctcaggtcacgagttttgaggataacttctta
atttatcatgaaaagatgaagtcatcttcgttgttcctttatgacagcactatgattgct
ccttttcctttgttgttctttggtggtgatatttctgtgtttgaagaagaaggccatgaa
actgtcgcagtcgatgaattcattaaatttaaatctcctacaagaatcgctaatttggta
aaggagctgcgagtggaactcgacaaactgctgaaacagaaaatagcacaaccaaagatg
aagttaagtgctggcactggagcaggaagcaaagaaattgctttgttgcgagctattatc
gacttgattaccagtgaggagaataaaacctggagaacacaagaagcacttgtcgatgac
tcacgagagatgcgtttttttaaggaaaaccggggatga
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