Montipora capricornis (leaf plate montipora): 138045013
Help
Entry
138045013 CDS
T10557
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138045013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaz03019
]
138045013
03012 Translation factors [BR:
mcaz03012
]
138045013
Enzymes [BR:
mcaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138045013
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
138045013
Translation factors [BR:
mcaz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138045013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
nSTAND3
NACHT
ATPase
AAA_16
NPHP3_N
NB-ARC
AAA_34
ABC_tran
AAA_19
Motif
Other DBs
NCBI-GeneID:
138045013
NCBI-ProteinID:
XP_068747471
LinkDB
All DBs
Position
4:complement(2166038..2237389)
Genome browser
AA seq
1009 aa
AA seq
DB search
MQRSLWASFRSIGSVNRCSSISSRWTFSKPKDVLAGCRHRHLNMHRGGGRNKPEFSRGGG
RQRGRGRHPAGLSGREIGLWYAGVEKRKRIERDLKQRAHVTMDSHQEERLTELLDTIRTG
ESNVNDVSGNPGSSDQKVGSSTLRTDAFENELNVDAVPQAYDGSFSEMTFTKTSLQQDPH
LDQYLKEEQQRKCASKETKYEAMQEFRRKLPAYSKREELLQLINSEQVLVISGETGCGKT
TQVAQFILDDAIDQGHGSSCRVICTQPRRISAISVAERVAAERDESCGGNSSVGFQIRLE
SKLPREQASILYCTTGILLRWLVSDPFLLGTSHIILDEIHERDVLSDFLLIIVRDLLPKR
PDLKLILMSATLNSEMFSSYFGNCKMAHIPGFTYPVQEFYLEEIIEKTGYHVDQDRKLGI
RRHQPKWKQYRDRGTKCFVKDGGNAESQEDDKEMMWKNYLDTIRHKYSPKTITTLQNVYM
EKIDLDLVVSVVTYISLHMEEGAILVFLPGWDDISKVHDKLKDVKVFSSGKFSIIPLHSM
MPSANQREVFDRPPKGVRKIVIATNIAETSITIDDVVFVVDGGKVKEKTYDVSNKIACLQ
PVWISKASSRQRRGRAGRVQPGYCFHLFTKFHADALEDYQLPEMLRTPLEELCLQIKILK
LGMISPFLTKALQRPEEKAVSNALEVLHQLNALDANEELTPLGYHLAALPVDPRVGKMIL
FGAIFSCLDPVLTVASVLGFKDPFVSPLGKQKEAEVARSNFAGDTRSDHLALLKAFQGWE
QALRQRREREYCWRNFLSGNTMKMIRDMKQQFSSLLREIGFLDSADPKAPAANQNSENLK
LVKAVLCAGLYPNVARIEHHRTFRRPPILRTHEDGRVYLHPXSVNAQVTSFEDNFLIYHE
KMKSSSLFLYDSTMIAPFPLLFFGGDISVFEEEGHETVAVDEFIKFKSPTRIANLVKELR
VELDKLLKQKXAQPKMKLSAGTGAGSKEIALLRAIIDLITSEENKTWVR
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagcctatgggcgtcttttcgctcaataggtagcgtaaacaggtgcagttca
atttcaagccgttggacattttctaaaccaaaggacgttttagctgggtgcagacatcga
catctcaacatgcacagaggaggtggacgcaataagccagaattttcaagaggtggggga
aggcaacgaggacgtgggcgacacccagctgggttatctggcagagagattggcttgtgg
tatgctggtgtagaaaaaagaaaaagaatagaaagagacctgaagcagcgagctcatgtt
accatggatagccaccaagaggagagactaactgaactactggacacaataagaactggt
gaaagtaatgtaaatgatgtcagtggaaatccagggtcgtcagatcaaaaagttggttca
tccacactgaggacagatgcatttgaaaatgaactaaatgtagatgctgttcctcaagcg
tatgatggtagctttagcgagatgacattcaccaagacatctttgcaacaagaccctcat
ttagatcaatatttaaaggaggagcaacagcgaaaatgtgcatcgaaggaaacaaaatac
gaagctatgcaggagtttcgaagaaaattacctgcttacagcaagagggaggaattactt
caactcatcaactctgagcaggtgttagtcattagtggagaaacaggctgtggaaaaaca
actcaggttgctcagtttattttggatgatgcaattgatcaaggccatggatcatcttgt
cgagttatctgcacacaacctagaagaataagtgcaatttcagtcgcggagagagttgct
gctgagcgagatgaaagctgtggtggaaacagcagtgttggctttcagattagattagaa
agcaagttgccgcgagaacaagcatcaattttgtactgtacaacaggcatcctgcttaga
tggcttgtctctgatccatttcttttgggaactagtcacatcattcttgatgagattcat
gaaagagatgttttatcggattttctgcttatcattgtcagagatcttttgccaaaaagg
ccggatttgaaacttatcctgatgagtgccactttgaattcagagatgttctcatcttac
tttgggaattgcaaaatggctcatattcctggctttacctatcctgtgcaagaattttat
cttgaagaaatcattgaaaaaacaggttatcatgttgatcaagacagaaagctagggata
cgaagacatcaaccaaaatggaaacagtatagagacagagggacaaaatgctttgtgaaa
gatgggggcaatgcagagagccaagaggacgataaggagatgatgtggaaaaactattta
gataccatccgacataaatattctcccaaaacaatcacaacgcttcagaacgtgtacatg
gagaagattgacctggatcttgttgtcagtgttgtcacctacatctctcttcacatggag
gaaggagccatacttgttttcctgcctggatgggatgatattagcaaagtgcatgacaag
ttgaaggatgtaaaagttttctcttcaggtaaatttagtatcattcctttacattccatg
atgccatcagcaaatcaaagagaggtttttgaccgtcccccgaaaggtgtcagaaagatt
gtcattgccaccaacattgctgaaaccagcattaccattgatgatgttgtctttgtggta
gatggtggcaaagtgaaagaaaagacttacgatgtaagcaacaaaattgcctgtttgcaa
ccagtgtggataagcaaggcttcctctcgacaaaggagaggtcgtgctggaagggttcaa
cctggctactgctttcacttattcactaaatttcatgccgatgcattggaagattatcag
ctgcctgagatgttacgcactccacttgaagaactgtgtcttcaaataaagatcctcaag
cttggtatgatcagtcctttcctgaccaaagcattacagcgaccagaggaaaaagcagtt
tctaatgcgttggaagtacttcatcaactgaatgctctggatgcgaatgaagagctgacc
ccacttggatatcacctagctgctttaccagtggatccacgagtcggcaaaatgatttta
tttggtgcaatattttcctgtttggacccagtgctgacggtagcgtccgttttgggtttc
aaagatcctttcgtttctccactgggtaagcagaaggaagcagaagtagcccgctcaaat
tttgctggtgatacgcgtagcgatcatttagctttattgaaagctttccagggatgggag
caagcattaaggcagagacgtgaaagggaatactgctggagaaactttctttctggaaac
accatgaagatgataagagacatgaagcaacagttttcttcgcttcttcgtgaaataggt
ttccttgactcagcggatccaaaagcccctgccgccaatcaaaactcagaaaatctaaag
ctcgtgaaagctgtcctgtgtgcagggctatacccaaatgtcgcaagaattgaacatcat
cgaacatttagaaggccaccaattcttcgaacccatgaagacggtcgagtgtatctgcac
cccnaatcagtgaatgctcaggtcacgagttttgaggataacttcttaatttatcatgaa
aagatgaagtcatcttcgttgttcctttatgacagcactatgattgctccttttcctttg
ttgttctttggtggtgatatttctgtgtttgaagaagaaggccatgaaactgtcgcagtc
gatgaattcattaaatttaaatctcctacaagaatcgctaatttggtaaaggagctgcga
gtggaactcgacaaactgctgaaacagaaantagcacaaccaaagatgaagttaagtgct
ggcactggagcaggaagcaaagaaattgctttgttgcgagctattatcgacttgattacc
agtgaggagaataaaacctgggtgagatag
DBGET
integrated database retrieval system
