Montipora capricornis (leaf plate montipora): 138045055
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Entry
138045055 CDS
T10557
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03013
Nucleocytoplasmic transport
mcaz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138045055
09122 Translation
03013 Nucleocytoplasmic transport
138045055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaz03019
]
138045055
03041 Spliceosome [BR:
mcaz03041
]
138045055
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
138045055
Spliceosome [BR:
mcaz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
138045055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Integrin_A_Ig_3
Motif
Other DBs
NCBI-GeneID:
138045055
NCBI-ProteinID:
XP_068747511
LinkDB
All DBs
Position
4:complement(522634..554746)
Genome browser
AA seq
660 aa
AA seq
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MKRRRTRTSSDADVQLPANLEEMEVDKRSAESDVGSFERGTEEIRKLVAEIQGQKLSGGD
SNESRIRCTLLFTILKKLNRLAHMRCKKSRERTQEAKQKVDGLHLQLQNLLYEVMHLKKE
ITKCFEFKSKDEEIELVSEDEFFRDAPKEISKPDLTRGDTHQLMLARLEWELEQRKTLAL
QKEQFLKKKGTLVKEIHTKKEFLDSLQPRLENILKATQPVQEYMNMPLDVQRMQHETARY
LSLPLYILYMQASAYNEACDPNLEVNILGDLDVAKAAMESKTAAREVESDSDQETSDGHK
RSKHRRKKEEARLEEKKKTLLKRHPLQIQLQVHCKDKATVHLLFSFLPFLXTVVVSPSLS
LNEIASGSVLANSTLLSAYSLLTCLFPDDDGEKAPNPSSLYQLAKVGISSFSEFVALLGR
PYMWVQRISGLDFLSEELHEIVPKSSVSLSHMEATIKAIRTRILSRLALQHQLSCLEGLT
IPQNKNYLQMFPSKISSTLTAWRPATLEELTEQPTLRSLVGDGLIKENDMFYQAVFERSK
VQLLAAVVLSQEHPTTPPFFSVQVCCGKKVIRDSYTEAIEAEVNVFYPELTEEDSSLNLL
ANQLHRLQMCFDIYLECGNLNDVEGAESFDREKFFLRFKKGRDRGLPLKYDSRQGLFTQR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggagaaggactcgcacatcctctgatgcagatgttcagctgcctgccaacctg
gaggaaatggaagtggataagagaagcgctgagagtgacgtaggatcttttgaaagggga
acagaagaaatcagaaagttggtcgcagagatccagggacaaaagctttcgggtggtgac
tcaaatgagtctaggatcaggtgtacgctgctttttacgatattaaagaaactcaaccga
cttgctcacatgagatgcaagaaatccagagaaagaactcaggaggcaaagcagaaggtt
gatggccttcatcttcagttacagaatctactgtatgaagtgatgcacttaaagaaagaa
ataaccaaatgttttgagttcaagtcaaaagatgaagagattgagcttgtttcagaggac
gagttttttcgagatgcacccaaagaaatatccaagcctgatcttacaagaggtgacact
catcagctgatgttggcaagacttgaatgggaattagaacagagaaaaacattggcatta
caaaaagaacaatttctaaagaagaagggaacacttgtaaaagaaatccacaccaagaag
gaatttttggatagtttgcagccaagacttgaaaatattttgaaggccactcaacctgtc
caagagtacatgaatatgccattggatgttcaacgtatgcagcatgaaactgcacgttat
ctttcacttcctttatacatcctgtacatgcaagcatcagcatacaatgaggcctgtgat
cctaatttggaggtcaatattttgggtgatttggatgttgctaaagctgctatggaatcc
aaaactgctgcacgagaagtggaaagtgattcagatcaagaaacaagtgatgggcataaa
aggtcaaaacacaggagaaaaaaggaagaagctcgtttggaagagaaaaagaagacgttg
cttaagaggcatcctctacaaatccaacttcaagttcactgtaaagacaaagcaactgta
catcttctgttttcctttttgccatttttanacactgtagtggtatctccttctttgtct
ttgaatgaaattgcttcaggttctgtcctagcaaacagcactcttctctctgcttattca
ctgttaacttgtctgtttcctgatgatgatggggaaaaggcacccaacccttccagtctt
tatcagcttgctaaagttggaattagcagtttctcagagtttgttgctctactgggaagg
ccgtacatgtgggttcagagaatcagtggactggacttcttgtctgaggaactgcatgaa
attgttcccaaatcatcagtcagcttatctcacatggaggctacaatcaaagccatacgg
acaagaatcttatctaggcttgccctccagcaccagttgtcttgcttagaggggttgacc
atcccgcaaaacaagaactaccttcagatgtttccgagcaagatatcatcaacactgacg
gcctggagaccagcaacgttggaagaacttacggagcaacccaccttgcggagtctcgtc
ggtgatggtctcatcaaagaaaacgacatgttttaccaagcggtctttgaaagaagcaaa
gttcaactcctagcggccgtagtattgtctcaagagcatccgacaacgccaccatttttc
tcagttcaagtgtgttgcgggaagaaggtcataagggacagctacactgaggcgattgaa
gcagaggtgaatgttttttatccagagctcacagaggaggactcttctctaaatttgctc
gccaatcagcttcaccggttacagatgtgcttcgatatttatttggaatgcggcaacctg
aatgacgtggaaggcgccgaatctttcgatagggagaagttcttccttcgttttaaaaag
ggccgggaccgaggcttacccctgaagtacgattcaaggcaaggattgttcactcaaaga
tag
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integrated database retrieval system
