Montipora capricornis (leaf plate montipora): 138045945
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Entry
138045945 CDS
T10557
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
mcaz Montipora capricornis (leaf plate montipora)
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaz03021
]
138045945
03036 Chromosome and associated proteins [BR:
mcaz03036
]
138045945
Transcription machinery [BR:
mcaz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
138045945
Chromosome and associated proteins [BR:
mcaz03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
138045945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
HHH_3
S1
SH2
Spt6_S1
HHH_9
Tex_N
Tex_YqgF
S1_RRP5
Zn_ribbon_RanBP
PI3K_p85B
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
138045945
NCBI-ProteinID:
XP_068748689
LinkDB
All DBs
Position
4:32302617..32350314
Genome browser
AA seq
1633 aa
AA seq
DB search
MSNFGDSEAEEDSLDESLSNKSEDDEEEEEEKDDANDIINDEEEESGGEEEEAHHGHHHK
RPRKDEDELDEEDLSLIEENLGIRLQRKKPRLKKVKLLDSDDDEEDQGAGNSAATDREAI
ANELFEGAEDSAEVSSEPPVQPQVDDTYADIDESEESEEDVDDFIVDDDGNPIKHVKKKR
RIPGTVQDSALMEAQDIFGLDFDFDEFEKYGREDYSSGEDEDEYLEEDDEDGVLRRQKKK
SSKKSIYEVFEPSELEKGMLTTKDNEVRTADVPERFQVRDFPVKSTEEGELDDEADWIYR
HAFLEMPISQQQDILDGDMHSRSKPIKPYSAVSKIREALNLMRNQLFEVPFIANYRKEYI
EPELNIDDLWKVWAWDEKWSQLRTRKENLHRLFQEMQDYQFNNIQESGDKPLDDDTRILQ
AEDVDRLDGVESMEQLKDVYSHFMLYYRNDIPAMWEAKRKTKQANEDTADGESNTTPPKQ
KMPAKRDLYTICRHAGVSGLARKFGLTPDQFGENLRDNYQRHETQQHPVEPEDSAENYLS
STFSTVTQVLEAARHMVAMQIARDPLVRQCVRQTFYERAKLRINPSKKGKKEIDESHACS
PFKYVKHKPIRDLVGDQFLRMCKAEEDGLLTISIGIDLDKNSGYHTYFDEVKQLYYRDEF
SHLVQEWNTQRMNALARAFNQMLYPLFEKELKLKLLEEAKDSVIKACCRRLKSWIEVAPY
QPEQHVEAQEYDDISNSEGLRVLACSISPSPDIPAFLAMLDGGGQVSDYLRLKYLLNRRN
ATRAKEREDKEKDLSTLKQFILKKRPQVIVVAAECREATSVIDDMKMCVAELEQENQIPT
ISVEPLDGEVARVFTSSPRSENEFREYPPLLRHAVSLGRRIQDPLSEFAALCVEEGELLC
LRLHPFQDHVAKEQLVKSLHQEFVTVVNDVGVDPNRLLEHPHTVALLQFVCGLGPRKASS
LLKSLRQQCTRLENRSQLVTVCGLGPQVFLNCAGFIKIDTSAISDSTTNYIEVLDGSRVH
PETYEWAKKMAVDALEYDEATMESNPSSALEEILETPDRLRDLDLDAFAEELERQGYGNK
RITLYDIRDELFGQYRERRLPFRALTVEERFRLLTGETNESLYVGKMVVCGVTGFANRKP
PRDMIDQAQPVRNDETGQWQCPFCLQDNYPDLSEVWTHLDNGSCAGQAVGVRTRMENGLS
GFIPTKMISDKRISSPHERVKVGMTLHCRVTRINMERLQLDLTCRSSDLLDKEGKYSPLK
DKYYDQDAADNDKKEEEAAKKKANRPKYVKRVIVHPAFKNISFKEAERMLAEMDQGECVV
RPSSKVDYHITVTFIVDEGVYQHVDVREEGKENAFSLGRSLWIDSEEFEDLDEIIARHVQ
PMASFAREIQNHKNYRAVDGNKTKLEEVLQAEKRKAPQRIPYLLSTTKEFPGKFFLGYLP
RVKPRVEYISVTPDGFRYRGRVHATLNGLFKWFKEHFRDPIPGTPRQRMPVAMSESNTPY
TPGGTPSINTDVDPARLVPQLQQHFPRGLTDPKVYSALAAVARQRQDSQKKTPTQLTPAQ
WGAAAAQHIQRQNKQRSQQTPTQQQTPTEQGYQQYPQYGYYQQHQDQTQTPTYGYQQTYS
GKKSSSKENSKSR
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatttcggtgacagtgaagcggaggaagactcactggacgaaagtctttcgaat
aaaagcgaggacgacgaagaagaagaggaagagaaagatgatgctaacgacattataaac
gacgaagaagaagaaagtggaggcgaagaagaggaagcccatcatgggcaccatcacaaa
agacctagaaaggatgaagatgaactggatgaagaagatttgtctttgatagaagaaaac
ttgggcatccgtttacaacggaagaagcctcgcttgaaaaaggtcaagttgttggactcg
gacgatgatgaggaggaccaaggagcaggaaattctgctgcgactgacagagaagcaatt
gctaatgagctatttgagggtgccgaagatagtgccgaggtttcctctgagcccccagtt
cagccacaggtagacgacacttacgcagacattgatgaatctgaggaatcagaagaagat
gtggatgactttattgttgatgatgatggaaatcctatcaaacatgtgaagaaaaaaagg
cgaattccaggaactgtgcaagattcagccctcatggaagctcaagatatctttggcctg
gattttgattttgatgaatttgagaagtatggcagagaggactactcatctggtgaagat
gaagacgagtatttagaagaggatgatgaagatggtgtactccgaaggcaaaagaaaaaa
tcctccaagaaatccatttacgaggtttttgaaccaagtgagcttgagaaaggaatgttg
acaactaaagataatgaggtcagaactgcagatgtaccagaaaggtttcaggtgcgtgac
tttccagttaaatcaactgaagagggggaacttgatgatgaggctgattggatttaccgt
catgcctttttggaaatgccgatatcgcagcaacaggatatccttgatggcgacatgcac
tctcgttccaaaccaatcaagccttactctgccgtcagtaagataagagaggcattaaac
ttgatgagaaaccagctctttgaggtgccatttatcgccaattacagaaaggagtacatt
gaacctgaactgaatattgatgacttgtggaaagtgtgggcatgggatgagaagtggagc
cagttgcgaacccgtaaggagaacctccatcgcttgttccaagagatgcaggattatcag
ttcaacaatatccaagagagtggtgacaaacctcttgatgatgacactaggattttgcag
gctgaagatgtagacaggctggatggagtggaaagcatggagcagctcaaagatgtatac
agccatttcatgctgtactacagaaatgacattcctgccatgtgggaagcaaagagaaaa
acaaaacaagctaatgaagacacagctgatggggaatcaaacactactccgcctaaacaa
aaaatgccagctaaacgtgatctgtataccatttgtagacatgcaggtgttagcggtttg
gccaggaagtttggtttgacaccagatcagtttggcgagaatttgcgtgacaactatcag
aggcatgaaacccagcaacatcctgttgagccagaagactcggctgaaaattacctcagc
agcacattttcaactgtcactcaagttctggaagctgctcgacatatggtggccatgcaa
attgctagggatcctctggttcgccagtgtgtgaggcagacattctatgaaagagccaag
ttaaggataaacccaagcaagaaaggaaagaaggagattgatgagtctcacgcatgcagc
ccgttcaagtatgtaaaacacaaaccaatcagagatcttgttggtgatcagtttttacgt
atgtgtaaagcagaagaagatggattattgaccatttctattggaattgacttggataaa
aattcaggttaccacacctattttgatgaagtcaagcagttatattacagagatgaattc
agccatttggtgcaggaatggaacacacagagaatgaacgctttggctcgagcctttaac
cagatgctttacccactgtttgagaaagaactcaaacttaaactcttagaggaagcaaag
gattctgttattaaggcctgttgccgcagactgaagtcatggattgaagttgctccatat
caacctgaacagcatgtcgaggcgcaagaatatgatgacatctcgaactcggagggactt
cgcgtgttagcctgttccatttctcccagtcctgacattccagcattccttgccatgtta
gatggtggagggcaagtgagtgactacctcaggctcaaatatctgttgaatagaagaaat
gcaacgagagccaaggaacgtgaagataaggagaaggatctctcgacgttgaagcagttt
attctcaagaagcgtccacaggttattgttgtcgcggctgaatgtcgagaggcaacgtct
gtcatagatgacatgaaaatgtgcgtcgcagaactggagcaagaaaatcagattccaaca
atatcagttgaacctttagatggtgaagtggcgcgtgtttttacgtcttcccctaggtct
gagaatgagtttcgtgagtacccacctcttcttcgtcatgccgtgtcacttggccgaaga
atccaggatccactgtccgagtttgctgctctgtgtgttgaggagggtgaacttttgtgt
ttgaggctgcatccattccaggatcatgtagccaaagagcagcttgttaaatcccttcac
caggaatttgtgactgttgtaaatgacgtaggtgtagatccaaacagactgctggaacat
ccacacactgttgcgctgcttcagtttgtgtgtggcctgggaccgaggaaagcttcctct
ctactaaagagccttcgccagcagtgcaccaggcttgaaaaccgctctcagctggtcacc
gtgtgtggtctgggtcctcaggtgtttcttaactgcgcagggtttattaagattgacaca
tcagccatcagtgactcgaccaccaattacattgaggtgcttgatggttccagagtgcat
ccagagacttacgagtgggcgaagaaaatggccgttgacgcactagaatatgacgaggca
acaatggagtccaacccgtcgtcagctttagaagaaattcttgaaactcctgacagatta
agagatctggatttagatgcgtttgctgaagagctcgaacgacagggctatggcaataag
cggattacactgtacgacatccgtgatgagcttttcggtcaataccgtgagcggcgcttg
ccgttccgagcactgacggtggaggaacgatttagactcctgactggcgagacgaatgaa
tcactgtacgttggcaaaatggtggtgtgtggtgttactggatttgccaacagaaagccg
ccgcgtgacatgatagatcaagcgcaaccggtcagaaatgatgagaccggacaatggcag
tgtcctttctgtctgcaagacaactacccagatttaagcgaggtgtggacacatcttgat
aacggaagctgcgcaggtcaggcagtgggtgtgcgcacaagaatggagaatggattgtcg
ggatttattccaaccaagatgattagcgacaagcgtatcagcagtccacatgaaagagtc
aaggtggggatgacgttgcactgccgcgtgacacgtatcaatatggaacgactacagctt
gacctgacgtgccgatcatccgaccttcttgacaaggaaggaaaatacagtcctttgaag
gacaagtattacgatcaagatgcagcagataatgacaaaaaagaagaggaagcggcaaaa
aagaaagcaaacagaccaaaatacgtgaagcgcgtcatcgtccacccagcgtttaagaac
atttcattcaaagaggctgagaggatgttggcggaaatggaccaaggagagtgtgttgtc
agaccaagcagcaaggttgattatcacattactgtcacttttattgttgatgaaggtgtt
taccaacacgtggatgttcgcgaggagggcaaagaaaacgcttttagtcttgggcgctca
ctctggatcgacagtgaggaattcgaagatcttgatgaaatcattgcgcgtcacgttcaa
ccaatggcttcgttcgcccgagaaattcaaaaccacaagaactatcgggcagtggacgga
aataagactaaactggaggaagtccttcaagcagagaaacgaaaagcccctcaaagaatt
ccttacctgctgagcacaaccaaggaatttcctgggaagttcttcctggggtatctccca
cgtgttaagccccgagtggagtatatcagtgtaaccccagacggattccgttaccgaggc
agagttcatgccacgttgaatggcctgtttaagtggtttaaagagcatttcagagacccg
atacctgggactcctcgccaacgtatgccagtagcgatgtcagagagtaacacgccctac
actcccgggggcactccgtctattaacacagatgttgacccagcacgacttgtaccacag
ctgcaacagcatttccctcggggattaactgaccctaaggtttactcagcgctcgccgcg
gttgctagacaacgacaagactcgcaaaagaaaaccccgacgcagcttactccggcgcaa
tggggagcggccgctgctcagcatatacagcgacaaaataaacagcggtcgcaacaaacg
cccacacaacaacagactccaacagaacagggttaccaacaatatccacagtatggctac
taccaacagcatcaggatcaaacccagaccccaacttatggataccagcagacttattct
ggaaagaaatcaagttcaaaggaaaacagcaagagtcggtag
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