Montipora capricornis (leaf plate montipora): 138046238
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Entry
138046238 CDS
T10557
Name
(RefSeq) replication factor C subunit 5-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03030
DNA replication
mcaz03410
Base excision repair
mcaz03420
Nucleotide excision repair
mcaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138046238
03410 Base excision repair
138046238
03420 Nucleotide excision repair
138046238
03430 Mismatch repair
138046238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcaz03032
]
138046238
03036 Chromosome and associated proteins [BR:
mcaz03036
]
138046238
03400 DNA repair and recombination proteins [BR:
mcaz03400
]
138046238
DNA replication proteins [BR:
mcaz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
138046238
DNA Replication Termination Factors
ELG1-RFC complex
138046238
Chromosome and associated proteins [BR:
mcaz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
138046238
DNA repair and recombination proteins [BR:
mcaz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
138046238
Check point factors
HRAD17(Rad24)-RFC complex
138046238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
Rad17
AAA_11
AAA_22
RuvB_N
AAA_24
AAA_16
AAA_5
DUF815
AAA_14
DEAD
ResIII
AAA_7
PhoH
Mg_chelatase
Thioredoxin_6
AAA_30
nSTAND3
AAA_2
AAA_19
TIP49
bpMoxR
MCM
AAA_3
AAA_28
ATPase_2
RNA_helicase
IstB_IS21
AAA_25
Motif
Other DBs
NCBI-GeneID:
138046238
NCBI-ProteinID:
XP_068749018
LinkDB
All DBs
Position
4:complement(34743150..34760938)
Genome browser
AA seq
186 aa
AA seq
DB search
MVVSGQDQKRNLPWVEKYRPNSLEDLISHKDIITTIKRFIDEERLPHLLFYGPPGTGKTS
TILAVAKQIYSPREFNSMVLELNASDDRGIGIVRGAILSFASTRTIFKSGFKIVILDEAD
AMTQDAQNALRRVMEKFTENTRFCLICNYLTKIIPALQSRCTRFRFGPLDNEQMTTRLQH
VISTEG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggttgtttccggtcaggaccaaaagcggaatcttccgtgggttgagaaatacagaccc
aacagtttagaagatttgatttctcacaaggatataatcacaacaatcaaaaggtttatc
gatgaagaacgtcttccccatcttttgttctatggcccacctggaactggaaaaacctcc
accattcttgctgttgccaaacaaatttactccccccgtgaatttaactccatggttctt
gagttgaatgcttcagatgatcgaggcataggaattgtccgtggagccatccttagcttt
gcaagcacaaggacgatttttaaatctggtttcaagattgtgatattggatgaagcagat
gctatgactcaagatgcacagaatgccttgcgcagagtgatggagaaatttactgagaac
acaaggttctgtttgatttgtaactacctcactaagatcattccagcacttcagtcacgc
tgcacacggtttcggtttgggcctcttgacaatgagcagatgacaactcggcttcaacat
gttatcagcaccgaggggtga
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