Montipora capricornis (leaf plate montipora): 138047185
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Entry
138047185 CDS
T10557
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor 8-like
KO
K12856
pre-mRNA-processing factor 8
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138047185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcaz03041
]
138047185
Spliceosome [BR:
mcaz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
138047185
Complex C
U5 SnRNP specific factors
138047185
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
PRO8NT
U6-snRNA_bdg
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
138047185
NCBI-ProteinID:
XP_068750028
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All DBs
Position
4:47414180..47443522
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AA seq
2333 aa
AA seq
DB search
MAAWGHPGMAALPAEITEEKLQEKARKWQQLQSKRYSEKRKFGFVEAQKEDMPPEHVRKI
IRDHGDMSSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVKVLYHITGAITFV
NEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLE
PIQIELDPEEDGSVYDWFYDHNPLVDTKMVNGSSYRKWNITLPIMSTLYRLGNQLLTDLV
DDNYFYLFDLKAFFTAKALNVAIPGGPKFEPLVRDVNLHDEDWNEFNDINKIIIRQPVRT
EYRIAFPYLYNSMPYKVHLPWYHHPSVVYIKTEDPDLPAFYFDPLVNPIAHRHAVKTSEP
LPDEDEDFELPEDIQPFLQDTPLYSDNTANGIALLWAPRPFCLRSARTRRALDIPLVKTW
YREHCPSGHPVKVRVSYQKLLKCYVLNALKHRAPKAQKKRYLFRSFKATKFFQTTTLDWV
EVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREI
LRLTKLVVDSHVQYRLGNVDSFQLADGLQYIFSHVGQLTGMYRYKYKLMRQIRMCKDIKH
LIYYRFNTGPVGKGPGCGFWAPGWRVWLFFLRGVVPLLERWLGNLLARQFEGRHSKGVAK
TVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARVILQHLSEAWRCWKANIPWKVPG
LPTAVENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQER
QHNYLKDGPYISAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAY
SVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYD
VEPLEKITDAYLDQYLWYEADKRRLFPPWVKPADTEPPPLLTYKWCQGINNLQDVWETSE
GECNVMMESNFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNIVINYKDMNHTNSYGI
IRGLQFASFIVQYYGLVLDLLVLGLQRASEMAGPPQMPNDFLTFQDVQTETQHPIRLYSR
YIEKVHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNRKCWPRDARMRLMKHDVNLG
RAVFWDIKNRLPRSVTTLSWDESFVSVYSKDNPNLLFNMCGFECRILPKCRTTFEEFTHR
DGVWNLQNEVTKERTAQCFLKVDDESQQRFHNRVRQILMASGSTTFTKIVNKWNTALIGL
MTYYRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSM
GHVLIPQSDLRWSQQTDAGITHFRSGMSHDKDQLIPNLYRYIQPWESEFIDSQRVWAEYA
LKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVTEI
IFCFEQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTLFSNMEGLFWE
KASGLKKSMKYKKLTNAQRSGLLVHQIPNRRFTLWWSPTINRDNVYVGFQVQLDLTGIFM
HGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKM
NSSCADILLFAAYKWNVSKPSLLADSNDIMDSTTTQKYWVDVQLRWGDYDSHDIERYARA
KYLDYTTDNMSIYPSPTGVLIGIDLAYNLHSAFGNWFPGVKPLIQQAMAKIMKANPALYV
LRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKP
INGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQII
VTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKLGDMILKATEPQMVLFNLYDD
WLKTISSYTAFSRLILILRALHVNADRTKVILKPDKTTITEPHHIWPTLSDEEWVPVEVA
LKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTAT
TTRTTNIHGDEIIVSTTSNYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGF
TYILPKNILKKFIVISDLRTQIAGYLYGVSPPDNPQVKEIRCIVLVPQWGTHQTVHLPNM
LPQHDYLKEMEPLGWVHTQPNELPQLSPQDVTTHAKIMADNPSXDGKKTVIITCSFTPGS
CSLTAYKLTPSGYDWGRNNKDTGNNPRGYLPSHYEKVQMLLSDRFLGFFMVPAQGSWNFN
FMGVRHSPNMRYELQLSNPKEFYHEVHRPSHFLNFSTMEDMEVIGADRDDMFS
NT seq
7002 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtggggacacccaggaatggccgcactgcctgctgaaataaccgaagaaaag
ctccaggaaaaagctcgcaaatggcaacaacttcagtctaagaggtacagtgagaagagg
aagtttggatttgtagaagctcaaaaagaggacatgcctccagagcatgttaggaagatc
attcgagatcatggtgacatgtcaagcagaaaatacagacatgacaagcgtgtttacctt
ggtgcactgaagtacatgcctcatgctgtgttgaagttgctggaaaatatgcccatgcca
tgggagcagatcagagatgttaaagtcctctaccacataactggtgccatcacctttgtt
aatgagattccatgggtggttgaaccaatttacttggctcagtggggcaccatgtggatc
atgatgcgtcgagaaaagagagacagaagacatttcaagaggatgcgatttcctccattt
gatgatgaagaacctcctttagattatgctgacaacatcttagatgttgaacctttggag
ccaatccaaatagagttggacccagaagaagatggaagtgtatatgattggttctatgat
cacaatccccttgtggatacaaaaatggtcaatggctcatcgtaccgaaagtggaacata
acgctcccaattatgtcaacactgtatcgtttgggaaaccagctgctcacagaccttgtt
gatgacaactacttttacttgtttgatctcaaagccttcttcactgccaaggctttaaat
gtggctataccgggaggtcctaaatttgaacctttagtgcgagatgtaaatcttcatgac
gaagattggaatgagttcaatgacatcaacaagataattatcagacagccagtaaggact
gaatacaggattgcatttccttatctttacaacagcatgccttacaaagtgcatcttcca
tggtaccaccacccatcagttgtttatatcaaaacagaggatcctgacctgccagcattc
tactttgatccccttgtgaatccaattgcgcacagacatgctgtaaagacttcagagccc
ttgcctgatgaagatgaagattttgagttgccagaggatattcaaccatttctgcaggat
accccactttactcagacaacacagcgaatggtattgcattgctatgggctcctagacca
ttctgtttgaggtctgcgaggactcgtcgagctcttgatatacctttggtgaagacatgg
tatcgtgaacattgcccatctggccacccagttaaggtgcgagtgtcttatcaaaagctt
ctgaagtgttacgtcttgaatgcattgaaacacagagcaccaaaagctcaaaagaaaagg
tatttattccgatctttcaaagccaccaagttttttcagaccaccactcttgattgggta
gaggttggtcttcaagtttgtcgtcaggggtacaacatgctgaacctgctcattcacaga
aagaatctcaattatctccatcttgattacaacttcaatttgaagccggtgaagacactg
accacaaaagaaagaaaaaagtcaagatttggaaatgcattccatctttgtcgagagatt
ttgcgacttaccaagctggtcgttgattcccatgttcagtacagattaggcaacgtggac
agctttcagcttgctgatggacttcagtacatcttctcccatgttggccagttaactgga
atgtatcgttacaagtacaaacttatgagacagatcagaatgtgtaaagacatcaagcat
ctcatttactataggttcaacactggacctgttggaaagggaccaggctgtggattttgg
gcccctggatggcgggtgtggctctttttcctacgtggtgttgttccactcttggaacgt
tggcttggcaatcttctggccagacagtttgaagggcgacactccaaaggtgtggctaag
actgtaaccaagcagcgcgttgaaagccactttgacttggaacttcgagctgctgttatg
catgatattttggacatgatgcctgagggaatcaaacagaacaaggcccgtgtaattctg
cagcatctcagcgaagcatggagatgctggaaagccaacattccatggaaggttcctggt
cttccaacagcagttgaaaacatgattctgcgttatgttaaagctaaggctgactggtgg
acaaacacggcacattacaacagagagcgtattcgtcgtggtgccactgtggacaaaact
gtttgtaagaaaaatttgggtcgtctgacaagactttacctcaaagccgaacaagagcga
caacacaactacctgaaggatggtccatatatctctgcagaagaagcagtggctatctac
accacaacagttcactggctggaaagcaggagattttctccgatcccatttcctcccttg
tcatacaagcatgacactaaactgcttattcttgcactggaaagactgaaagaagcatac
agtgtgaagagtcgtttgaatcagtcccaaagggaggagttgggattaattgaacaagct
tatgacaaccctcatgaggcactcagtagaatcaagcgtcacttgctcacacagagagca
tttaaagaggttggcattgagttcatggatctgtacagccatcttatccctgtgtatgat
gtggaaccattggagaagatcacagatgcctaccttgatcagtacttgtggtatgaagca
gacaaaaggcgtttgtttcccccttgggttaagccagctgacacagaacctccaccgctg
cttacgtacaagtggtgccaaggaattaacaacttgcaagatgtttgggagacatcagaa
ggagagtgtaatgttatgatggaatcaaactttgagaagatgtatgaaaagattgatctt
accttgttgaatcgacttttgcgtctgattgtggatcacaatattgcagattacatgaca
gcgaagaacaacatcgttatcaactacaaggatatgaaccacaccaattcgtatggcatc
atccgtggtctgcagtttgcatcattcattgtacagtactatggtttagttctggatcta
ctggtcctgggtctacagagggcgagtgagatggcaggtcctcctcagatgccaaatgat
ttcttgaccttccaagatgtccagacagagacccagcatccaatccgactctactccaga
tacattgaaaaagtccacatatttttcaggttttctgctgatgaggcacgggatctgatc
cagcgttacctcacagagcatccagaccccaacaatgaaaacatagtgggctacaacaac
aggaagtgctggcccagagatgctcgcatgagactcatgaagcacgatgtaaatcttggg
cgtgctgtgttctgggacatcaagaaccgtcttccccgatctgtcaccaccctcagctgg
gatgagagctttgtgtctgtatacagcaaggataacccaaatcttttgttcaacatgtgt
ggttttgaatgtcgcatcttgcccaagtgtcgcacaacatttgaggaattcacacacagg
gatggtgtctggaatttgcaaaatgaggtaaccaaagagcgaactgcccagtgcttcctc
aaggtagatgatgagtcacaacagagatttcacaacagagttcgtcagattcttatggct
tcaggctctaccacctttacaaagattgtgaacaaatggaacactgccttgattggtttg
atgacatattacagggagtcagttgtcaacacacaagaacttcttgacttgctggtcaag
tgtgaaaacaagatccaaactcgtatcaagattggcttgaactccaagatgcccagtcgc
tttcctccagttgtattttacacacctaaagagctaggaggtcttggtatgctctccatg
ggtcatgtgctcattccacagtcagatctcaggtggtcccaacagacagatgctggaatc
actcactttagatctggaatgagccatgataaagatcagctgattcctaacttgtacagg
tacatccagccatgggagagtgagttcattgattctcaaagggtgtgggcagagtatgca
ttgaaacgccaggaggctaatgcgcaaaacagacgtttgactcttgaagatttagaagac
tcttgggatcgtggaattccccgtatcaacactctgtttcagaaagacaggcacacactt
gcttatgacaagggctggagagtgagaactgatttcaaacagtaccaggtaacggaaata
atcttttgttttgaacagaatcccttctggtggacacaccagcgacatgatggcaagctg
tggaacttgaacaactaccgtacagacatgatccaggcccttggtggtgtagaaggcatt
ctggagcacaccctgttcaaaggaaccttattttccaacatggagggtctcttctgggag
aaggccagtggtttgaagaaatccatgaagtacaagaaactaacaaatgcacaacggtct
ggattgcttgtccatcagattccaaacagacgatttacactgtggtggtcgccgaccata
aacagagataacgtatatgtgggtttccaggttcagcttgatcttacaggaatcttcatg
catggcaagatccctacactgaagatttcactaattcagattttcagggcccacttgtgg
cagaaagtccatgaaagtgttgtcatggatctgtgtcaggtttttgatcaagaactagat
gctctagagatagaaactgtgcagaaagaaaccattcacccccgtaaatcctacaaaatg
aacagctcctgtgctgatattctgttgtttgctgcctacaagtggaatgtctccaaacct
tcccttttggctgattcaaatgatatcatggatagcaccacaactcaaaagtactgggtt
gatgtacagctaagatggggagactatgattctcacgacattgagagatatgcacgtgca
aagtaccttgactacaccactgacaacatgagtatctatccttcacctactggagtgctc
attggcatcgacttggcctacaatcttcacagtgcttttggcaattggttcccgggtgtg
aagccgcttattcaacaagccatggccaagatcatgaaggccaaccctgctctgtacgtg
ttgagggaaagaatcaggaaaggtcttcagctatactccagtgaacccactgagccttat
ctgtcatcacagaattatggagaattattctcaaaccagatcatctggtttgtggatgac
accaatgtctacagagtcaccattcacaagacattcgagggtaacttgaccaccaaacca
atcaatggagccatcttcatcttcaatccgcgtacaggacaactgtttcttaaaatcatt
cacacttctgtgtgggcagggcagaagcgtctgggacagttggccaaatggaagacggcc
gaagaagtagcagctttgattcgctcactgccagttgaggaacaacccaaacagatcatt
gtcacaagaaagggaatgcttgatcctctggaggttcatctgctggatttccctaacatt
gtgatcaagggcagcgaactgcaacttcccttccaagcctgtttgaaggttgagaagctt
ggagacatgattctgaaagcaaccgagcctcagatggtattgttcaatctctatgatgat
tggttgaagacaatttcatcgtacacggcattctctcgtctaatcctcattctgagagcc
ttgcacgtgaatgcagaccgaaccaaagttatcctcaaaccggacaagaccaccatcaca
gagccccatcacatttggcccaccctcagtgacgaagaatgggtgccagttgaggttgca
ttgaaagatctcatcttggctgactatggcaagaagaacaatgtgaacgtggcttcttta
actcagtccgagatcagagacatcatcctgggtatggaaatatcagcaccctcgcaacag
aggcagcagatagctgaaatcgagaagcagacgaaagaacagtcacaactcacagctacc
acgacacgcaccacaaacatccatggagacgagatcattgtgtccacgacttccaactac
gagacgcaaacgttctcctctaagaccgagtggcgagtgagggccatatctgccactaat
ttgcatcttaggaccaatcatatttacgtatcgtctgacgacattaaagagactggcttt
acgtacattcttccaaagaacatcctcaagaagttcattgttatttccgatctgagaact
cagattgcaggttacctttacggcgtaagtccacctgataaccctcaagtcaaggaaatt
cgctgtatcgttcttgtaccacagtggggtactcaccaaacagtccatttaccaaacatg
ttaccacaacacgactacctcaaggaaatggaaccattgggttgggttcatacccagcca
aacgaacttcctcaactttctccgcaagacgtgacgacacacgctaagatcatggcggac
aatccgtcttgagacggtaagaaaactgtcattattacgtgcagttttacccctgggtcg
tgttcactcacagcctacaaactgaccccctcgggctatgactggggacggaacaacaag
gacactggtaataatccgagaggatacctcccatcgcactacgagaaagtacaaatgtta
ctgtctgatcgtttccttggcttctttatggtgcccgctcagggatcctggaacttcaac
tttatgggtgttcgccattctcccaacatgcgttatgagctgcagctgtccaacccgaaa
gagttttaccacgaagttcaccgaccatcacattttctcaattttagcaccatggaggat
atggaggttatcggcgccgacagggatgatatgttttcctag
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integrated database retrieval system
