Montipora capricornis (leaf plate montipora): 138047611
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Entry
138047611 CDS
T10557
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03030
DNA replication
mcaz03420
Nucleotide excision repair
mcaz03430
Mismatch repair
mcaz03440
Homologous recombination
mcaz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138047611
03420 Nucleotide excision repair
138047611
03430 Mismatch repair
138047611
03440 Homologous recombination
138047611
03460 Fanconi anemia pathway
138047611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcaz03000
]
138047611
03032 DNA replication proteins [BR:
mcaz03032
]
138047611
03400 DNA repair and recombination proteins [BR:
mcaz03400
]
138047611
Transcription factors [BR:
mcaz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
138047611
DNA replication proteins [BR:
mcaz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
138047611
DNA repair and recombination proteins [BR:
mcaz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
138047611
MMR (mismatch excision repair)
138047611
DSBR (double strand breaks repair)
HR (homologous recombination)
138047611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
SHLD2_OB1
CDC24_OB3
POT1
Motif
Other DBs
NCBI-GeneID:
138047611
NCBI-ProteinID:
XP_068750637
LinkDB
All DBs
Position
4:56337306..56377597
Genome browser
AA seq
640 aa
AA seq
DB search
MLSEGAIQDILFKAADQHPQRPVFQILGIKKIQAKSNDGAGNDRYRLVVSDGIYLYTSAM
LATQLNDLVTSKQIEVKAVIRLDKYICNIIQETRKVLIVLELSVLKAAHEVMGKIGDPKP
LTTDSKGDQQHQQQPQQNGSGPVQRNVTDDHHQNQPQRGLAGQQSRAGIVGSKQTGGPLR
TGGLASATYGSNQQVFRGGENSKPVYPISSLTPYQNRWTIRARVTSKSSIRTWSNSKGDG
RVFNVDLVDESGEIRATGFNDAVDKFYEILEANKVYYISKCSLRTANKQYSSIKNDYEMY
INNDTMIELCNDPCDLPTIQYNFVSIGDLANFNGNDMVDILGVVINIDDVTQITTKATNR
QISKRDVTLLDRSEKSVRVTLWGDYAEKFEEHIGNNPVLALKGVKVSEYGGRSLSVVNST
NIMVDPMDLKEAHSLRGWYMNVGKDTAVESMSGLRSDGSVGSGNYKTLLQVKSEQLGMGD
KPDYFTAKATAVFFKKDNCLYKACPSADCNKKVIEEGDGTYRCEKCNKTHPDFKYRLILS
ANLADFSGNQWVTCFQESAEAILNISANQVGQIKDSGDERAYDHIFSEANFKTYNFRIRA
KMETYNDETRLKCSCVGATPLDFQKECRRLMEEIKKLQAL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttatccgaaggagcaattcaggatattttgtttaaagcggctgatcagcatccccag
aggcctgtttttcagatattgggaattaaaaaaattcaagcaaaaagcaatgatggagcg
ggcaatgatcgttacaggcttgtggtctctgatggtatatatctctatacttctgccatg
ttagccacccagctcaatgacttagtgacatccaaacaaatagaggtcaaagctgttatc
cggctggataaatacatctgtaatataattcaggagacaaggaaagttttgattgttttg
gaactttctgtgttaaaagctgcgcatgaagtgatgggtaagataggagacccaaagccc
cttaccacagattcaaaaggggatcaacagcaccagcagcaaccccaacaaaatggtagt
ggaccagtgcagcgtaacgtgacagatgaccaccatcaaaaccagcctcaaagagggtta
gctggacagcagtccagagctggaattgtgggaagcaagcaaacaggaggacctcttagg
acagggggacttgcttctgccacatacggaagtaatcagcaagtattccgaggaggagag
aattccaaacctgtttacccaataagttctttgacaccatatcaaaacaggtggacaata
cgtgctcgtgtaacaagcaagtctagtatacgcacatggagtaattccaaaggggatggg
cgtgtcttcaatgttgatcttgtggatgaatcgggtgaaatcagagccacaggatttaat
gatgctgttgacaagttttatgaaatcctggaagccaacaaggtgtactatatttccaaa
tgttctttaaggactgcaaacaaacagtactcttctatcaagaatgattacgagatgtat
atcaacaatgatacaatgattgaattgtgtaatgacccttgtgacttgcccactatacag
tataactttgtcagcattggggatttggctaacttcaatggaaatgacatggttgacata
ctgggagttgtgatcaacattgatgatgttacacagattactacaaaagcaaccaacaga
cagatatctaagagggatgttacattgttggatagatcagagaaaagtgttcgagtgacg
ctttggggcgattatgctgagaaatttgaggaacatattggaaacaatccagttcttgcc
ttgaaaggagtaaaagtttcagagtatggaggtcgttcactgtctgtagtaaactctaca
aacattatggttgatccaatggatctcaaagaagctcacagtttacgtggatggtacatg
aatgttggtaaagatacagctgttgagtcaatgtctggactgagatcagatggatcagtt
ggttctggtaattacaagactttactgcaagtcaagtcagaacagcttggaatgggtgat
aaaccagattatttcacagcaaaggctacagcagttttcttcaagaaagataactgttta
tacaaggcttgtccttctgcagattgcaataagaaagttatcgaagaaggagatggaact
tatcgctgtgaaaagtgcaacaaaacccatcctgatttcaagtatcgactaattttatcg
gcaaatttagccgatttttcggggaatcagtgggtcacgtgtttccaggagtcagcagag
gcaatactcaacatcagcgcaaaccaagttggtcagataaaggactcgggtgatgagcgg
gcctatgatcacatcttttcagaagcaaacttcaaaacttacaatttcaggattcgggct
aaaatggagacatataatgatgaaactcgcctcaagtgttcatgcgtgggtgcaacccca
ttagatttccaaaaggagtgtagaagacttatggaggagattaagaagctccaggctctt
tag
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