Montipora capricornis (leaf plate montipora): 138048518
Help
Entry
138048518 CDS
T10557
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138048518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaz03021
]
138048518
03036 Chromosome and associated proteins [BR:
mcaz03036
]
138048518
Transcription machinery [BR:
mcaz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138048518
Coactivators
SAGA/TFTC/STAGA complex
138048518
Chromosome and associated proteins [BR:
mcaz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
138048518
STAGA complex
138048518
TFTC complex
138048518
SAGA complex
138048518
SLIK complex
138048518
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Aladin
PAC11
CFAP251_N
DSE1_N
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_NOL10_N
TRM82_WD
ASA1
Beta-prop_IFT140_1st
Tricorn_2nd
Beta-prop_WDR19_1st
WD_LRWD1
DUF7165
Beta-prop_WDR11_2nd
Cytochrom_D1
Beta-prop_NWD2_C
Beta-prop_ACSF4
PD40
Motif
Other DBs
NCBI-GeneID:
138048518
NCBI-ProteinID:
XP_068750802
LinkDB
All DBs
Position
5:complement(22986031..23002833)
Genome browser
AA seq
484 aa
AA seq
DB search
MAAHMQHIHIISCIFIIIIIQFSVFEGRPRSKQTIEATAGAVTGEATFEANKSKVYYGIP
PEPDLGVVIEEESEDDDDKDKPKKKKVKKDSNGPGKKKQEHNPNAPPLNRQIQFPVMKDS
DKLVKITLMREAAKRIRLGPDTLPSICFYSVLNAHTSLNTVSMSEDSSLLSGGFEDSSVR
VWSLTPKKLRMLKSPSELAQIDKEAEDVLERIMDHRTAVESRRLIGHSGPVFSTSFNTDN
SFLLSSSADRTVRLWSLYTFSSLVCFKGHNYPVWDVQFCPKGHYFATASHDRTARLWSTE
HPQPLRILAGHVSDVNRVAFHPNCNYVATGSCDRTVRFWDLNTGSSVRFFTGHKGAIYSL
AFSPDGRYLASSGVDKRILVWDLAEGTLLTELKGHSDTVYSLRFSRDGNMLASGGVDNCV
KLWDARAICNPEDDEEERSNENPESSKCETFELGSYPTKRTPVHCLHFTLRNLLLASGPF
IPSS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacatatgcaacacattcatataatttcttgcatctttattattataattatt
caattttcagtttttgaaggaagaccacgcagcaagcaaacaatagaagctacagctgga
gcagtcacaggggaagcaacattcgaagctaataaaagcaaggtttattatgggatacca
cctgaacctgatcttggagttgtgatcgaagaagagagtgaagatgatgatgacaaagat
aaaccgaagaaaaagaaagtcaagaaggactcaaatggaccaggcaaaaagaaacaggag
cataatccaaatgcacccccattgaaccgtcagatacaatttcctgtcatgaaggacagt
gataaattggtgaagattaccttgatgagagaagctgccaaaagaataaggttgggtccg
gacactcttccatccatctgcttctacagtgtactcaatgcacatacaagtttgaacact
gttagtatgtcagaggactcaagcctgctgtcaggtgggtttgaggacagtagtgtgcgg
gtgtggagcctcaccccaaagaaactgagaatgctcaaatcaccctcagaacttgcacaa
attgacaaagaagcagaggatgttcttgaacgaataatggaccacaggacagctgtggaa
agtagacgcttgattggtcattcagggccagtattttccactagttttaacacagataac
tcattccttctctcgagctctgcagacagaacagtgcgtctatggagtctctataccttc
agttcattagtttgttttaaaggacataactaccccgtctgggacgttcagttttgtcca
aaagggcactatttcgctacagcatctcatgaccgcacagcccgcctttggagcaccgag
cacccacaaccgctcaggatcttagctggtcacgtgtctgacgtcaatagagttgctttt
catccaaactgcaactacgttgctactggatcttgtgaccggaccgtgaggttctgggat
ctaaatactggcagctctgtccgtttttttactggacataagggagctatctattcgctg
gcgttctctcccgacggacgttacctcgcctcgtcaggagtcgataagcgtatcctagtt
tgggacctggcagaagggacattactgacagagctgaaaggacactcagataccgtgtac
tctttgcgttttagtagagacgggaacatgctcgcttcaggtggtgtggataactgtgtc
aagctatgggacgctcgtgctatttgtaatcctgaggatgatgaagaggaaagaagcaac
gaaaaccctgaatcgtccaaatgcgagactttcgaactcggatcctatcctacaaagagg
acgccagttcactgtttacactttacgcttagaaatttgctacttgcgtctgggcctttt
attccgtcttcctaa
DBGET
integrated database retrieval system
