Montipora capricornis (leaf plate montipora): 138049942
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Entry
138049942 CDS
T10557
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138049942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaz03021
]
138049942
03036 Chromosome and associated proteins [BR:
mcaz03036
]
138049942
Transcription machinery [BR:
mcaz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138049942
Coactivators
SAGA/TFTC/STAGA complex
138049942
Chromosome and associated proteins [BR:
mcaz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
138049942
STAGA complex
138049942
TFTC complex
138049942
SAGA complex
138049942
SLIK complex
138049942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_Aladin
NBCH_WD40
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
Beta-prop_WDR11_2nd
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
138049942
NCBI-ProteinID:
XP_068752526
LinkDB
All DBs
Position
5:complement(22210682..22238385)
Genome browser
AA seq
675 aa
AA seq
DB search
MVANPVSSGAGVTTTSKSNSSKKEKETLLAVLQFLKKNKLPETEKILRQEANCFDSLEEI
NLQTTPDAEPDISSVLSAYNSDADPTRYEDYYSSLQAFVEKSLDVYKPELAMVLYPMFVH
MYLELVYKGSEKEAQSFFACFRGSQEDYHEEDLSKLAAITRREHMKSNELMGTLRSNKFV
IRMSKDTYQVLKKHLQDQQQEVLLTLIQQHLHFDVFEGRPRSKQTIEATAGAVTGEATFE
ANKSKVYYGIPPEPDLGVVIEEESEDDDDKDKPKKKKVKKDSNGPGKKKQEHNPNAPPLN
RQIQFPVMKDSDKLVKITLMREAAKRIRLGPDTLPSICFYSVLNAHTSLNTVSMSEDSSL
LSGGFEDSSVRVWSLTPKKLRMLKSPSELAQIDKEAEDVLERIMDHRTAVESRRLIGHSG
PVFSTSFNTDNSFLLSSSADRTVRLWSLYTFSSLVCFKGHNYPVWDVQFCPKGHYFATAS
HDRTARLWSTEHPQPLRILAGHVSDVNRVAFHPNCNYVATGSCDRTVRFWDLNTGSSVRF
FTGHKGAIYSLAFSPDGRYLASSEVDKRILVWDLAEGTLLTELKGHSDTGYSLCFSRDGN
MLASGGVDNCVKLWDARAICNPEDDEEERSNENPESSKCETFELGSYPTKRTPVHCLHFT
LRNLLLASGPFIPSS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggtggccaacccggtttcatctggggcaggagtcaccacaacttctaaatcgaactca
tctaaaaaagaaaaagaaacattgcttgccgtgctgcagtttttgaagaagaacaagtta
cctgaaactgagaagatcctcaggcaagaggccaactgttttgattctctggaagaaata
aatcttcagactactccagatgctgagccagatatttcttcagttttgtctgcttacaac
agtgatgctgatccaacgagatatgaggactactacagcagtttgcaagcatttgttgag
aagtcgcttgatgtatacaagcctgagttagccatggttctgtatccaatgtttgttcac
atgtaccttgagcttgtgtataaaggaagtgaaaaagaagcccagtctttctttgcttgt
tttcgtgggagtcaagaggattaccatgaggaagatcttagcaaattggcagccattact
aggcgtgaacacatgaaaagtaatgaactgatgggaacattgaggagtaacaagtttgtg
atcaggatgtcaaaggatacgtatcaagtgctcaagaaacatttacaggaccaacagcaa
gaagtactgttgaccctcatccagcaacatcttcattttgatgtttttgaaggaagacca
cgcagcaagcaaacaatagaagctacagctggagcagtcacaggggaggcaacatttgaa
gctaataaaagcaaggtttattatgggataccacctgaacctgatcttggagttgtgatc
gaagaagagagtgaagatgatgatgacaaagataaaccgaagaaaaagaaagtcaagaag
gactcaaatggaccaggcaaaaagaaacaggagcataatccaaatgcacccccattgaac
cgtcagatacaatttcctgtcatgaaggacagtgataaattggtgaagattaccttgatg
agagaagctgccaaaagaataaggttgggtccggacactcttccatccatctgcttctac
agtgtactcaatgcacatacaagtttgaacacagttagtatgtcagaggactcaagcctg
ctgtcaggtggatttgaggacagtagtgtgcgggtgtggagcctcaccccaaagaaactg
agaatgctcaaatcaccctcagaacttgcacaaattgacaaagaagcagaggatgttctt
gagcgaataatggaccacaggacagctgtggagagtagacgcttgattggccattcaggg
ccagtattttctactagttttaacacagataactcattccttctctcgagctctgcagac
agaacagtgcgtctatggagtctctataccttcagttcattagtttgttttaaaggacat
aactaccccgtctgggacgttcagttttgtccaaaagggcactatttcgctacagcatct
catgaccgcacagcccgcctttggagcaccgagcacccacaaccgctcaggatcttagct
ggtcacgtgtctgacgtcaatagagttgcttttcatccaaattgcaactacgttgctact
ggatcttgtgaccggaccgtgaggttctgggatctaaatactggcagctctgtccgtttt
tttactggacataagggagctatctattcgctggcgttctctcccgacggacgttacctc
gcctcgtcagaagtcgataagcgtatcctagtttgggacctggcagaagggacgttactg
acagagctgaaaggacactcagataccgggtactctttgtgttttagtagagacgggaac
atgctcgcttcaggtggtgtggataactgtgtcaagctatgggacgctcgtgctatttgt
aatcctgaggatgatgaagaagaaagaagcaacgaaaaccctgaatcgtccaaatgcgag
actttcgaactcggatcctatcctacaaagaggacgccagttcactgtttacactttacg
cttagaaatttgctacttgcgtctgggccttttattccgtcttcctaa
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