Montipora capricornis (leaf plate montipora): 138054500
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Entry
138054500 CDS
T10557
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz04120
Ubiquitin mediated proteolysis
mcaz04137
Mitophagy - animal
mcaz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138054500
04120 Ubiquitin mediated proteolysis
138054500
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
138054500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcaz04131
]
138054500
04121 Ubiquitin system [BR:
mcaz04121
]
138054500
03029 Mitochondrial biogenesis [BR:
mcaz03029
]
138054500
Enzymes [BR:
mcaz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
138054500
Membrane trafficking [BR:
mcaz04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
138054500
Aggrephagy
Other aggrephagy associated proteins
138054500
Xenophagy
Other xenophagy associated proteins
138054500
Ubiquitin system [BR:
mcaz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
138054500
Mitochondrial biogenesis [BR:
mcaz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
138054500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR
IBR_1
IBR_2
Rad60-SLD
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
138054500
NCBI-ProteinID:
XP_068757053
LinkDB
All DBs
Position
6:72998844..73022392
Genome browser
AA seq
489 aa
AA seq
DB search
MQVIFCWHFQYGNFKLIIYRISCIAVKLSIMASAKRSSKFPIFVRFNSNTNIPVQADPQW
NVLRLKQEIAEHQAVDPREIRIIFAGKELKDDLKVKDADIPNQSVIHAIRGRPWSARSGR
DLVTPLSKVCLATVGEEEEEEELEATTGVSVASARGTSVPKRKAQYFVYCKSVCKDITPG
KLRVCCSRCNEGAMVLYQGPSSWDDVLKPRRIRGSCKTPACNGDTAVFFFKCARHPAAEG
DRCVALPLIHSNTRDIICITCTEIKESVLVFPCPDKHAMCLDCFGTYCTVKLNDRQFVQT
NDHGYTLPCPGTAVECTRAFITEAHHFRVLEKEQYDRYQSFAAEEHVLKEGGVLCPRPGC
GMGLLPEQRMSIVRCSSCHLEFCKECKEPFQRGHSCCRNRSNAAYAAAAASARASRYQVN
AENARRARWEADSQRVIERTSKKCPGCQANTEKNEGCNHMTCSRCKTQWCWICVKAWNSE
CQSSHWFRQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttatcttttgttggcattttcagtatggaaattttaaactgattatataccgg
atctcttgcattgctgtaaaattaagcatcatggcttctgcaaaaagatcttcaaaattc
cccatctttgttaggtttaattccaacacaaacattccagttcaagcagatccacaatgg
aatgtgttgcgattaaagcaggagattgcagaacaccaagcagtggatcctagagagata
agaattatttttgctggcaaagagctcaaagatgacttgaaagttaaggatgctgatatt
ccaaatcaaagtgtaattcatgccattcgtggtcgcccatggtctgcaagatcaggaaga
gacttagtgactcctttgtctaaagtttgtcttgctactgttggagaagaagaagaagaa
gaagaattagaagcaaccacaggtgttagtgttgcttcagcacgtggaacatctgtgccc
aagcgcaaggctcaatactttgtttattgcaagtcagtttgtaaagacatcactcctgga
aagctgagggtttgttgttcacgctgtaatgaaggtgcgatggttctttatcagggccca
agcagctgggatgatgtattgaagccaaggagaattagaggatcatgcaaaactcctgcc
tgcaatggagacaccgcggttttcttctttaaatgtgcaagacacccagcagctgagggt
gacagatgtgttgctcttcctttaattcattcaaacaccagggatataatctgcataacc
tgtacagagatcaaggagtctgttttggtttttccatgcccggataaacatgctatgtgc
ctggattgctttggaacttactgcacagttaaactgaacgacagacagtttgtacaaact
aatgatcatggatacactttaccatgtccaggcacagcagttgagtgcacacgtgccttt
atcaccgaggctcatcatttccgggttcttgagaaagaacagtatgatcgataccaaagt
tttgctgctgaagagcatgtactaaaggagggtggtgtactatgcccccgccctggatgt
ggaatgggactgttacctgagcagcgcatgagcattgttagatgtagcagctgtcatctg
gagttttgtaaagagtgcaaggaaccttttcaacgaggacactcttgctgtcgaaaccga
tcaaatgctgcttatgctgctgctgctgcctcggcgagagccagcagatatcaagtaaac
gctgaaaatgctcgccgcgcgcgctgggaggctgactcgcagcgagtgatagagcgaaca
agcaagaagtgtcctggatgtcaagcaaacaccgagaagaatgagggatgtaatcacatg
acctgctctagatgtaagactcaatggtgttggatttgcgtcaaagcgtggaactccgaa
tgtcagagttctcactggttccgtcagtga
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