Montipora capricornis (leaf plate montipora): 138057236
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Entry
138057236 CDS
T10557
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03040
Spliceosome
Brite
Enzymes [BR:
mcaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138057236
Spliceosome [BR:
mcaz03041
]
Complex C
Other components
Step II factors
138057236
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
T2SSE
ABC_tran
PhoH
AAA_16
Cas3-like_C_2
TsaE
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
138057236
NCBI-ProteinID:
XP_068759418
LinkDB
All DBs
Position
1:13702680..13771716
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AA seq
764 aa
AA seq
DB search
MSPVKIVKNPDGSLQRAAMTQSALAKERRELKQAQREAQADSIPKDLSKLWIDPVPDVGG
NKAVFAQDMRGVGLANDDMPEWKRATFGGNKASYGKKTNLTILEQRQGLPIYKLRQELLK
AVHENQVLIVIGETGSGKTTQITQYLAEEGFLSIGKLACTQPRRVAAMSVAKRVSEEYGC
RLGQEVGYTIRFEDCTSTETKIKYMTDGMLLRECLLDPDLNQYAIVILDEAHERTISTDV
LFGLMKKTVKKRPDLKLIVTSATLDAVKFSTYFFEAPIFTIPGRTYPVEILYTKEAETDY
LDASLITVMQIHLTEPPGDVLVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSAL
PSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKSGIDALVV
TPISQAQAKQRSGRAGRTGPGKCYRLYTERAYRDEMLPTAVPEIQRTNLASTILSLKAMG
INDLLSFDFMDPPPMETMISAMEQLHSLSALDDEGLLTRLGRRMAEFPLEPQLSKMLIQS
VHLGCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQSEGDHMTLLAVYNSWKNNK
FSNPWCFENFVQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKTTSRAQKAITSGFFRNAA
RKDPQEGYRTVTDNQVVFIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTVDPKWLVEF
APAFFKMGNPTKLSKRKRQERLEPLYNRYEEPNAWRISRAFRRR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctgtgaagattgttaagaatcctgatggctccttgcaaagagctgccatgaca
caaagtgcgttagctaaggagaggagagaactcaagcaggctcaaagggaagcacaagca
gacagtatacccaaagacctcagcaagctctggattgatccagttccggatgtgggtggt
aacaaagcagtctttgctcaagacatgcgaggtgttggattggcaaatgatgacatgcca
gagtggaaacgagctacctttggaggaaacaaagcttcctatggaaagaaaacaaactta
actatcctggagcaaaggcaaggattacccatatataaactacgacaagaacttttaaag
gctgtccatgaaaatcaagtgttgattgttatcggagaaacagggagtggaaagacgaca
cagataacacagtacttagcagaagaaggcttcctttctattggtaaacttgcgtgcacc
cagccccgtcgagtagctgcaatgtctgttgctaagagagtatcagaagaatatggatgt
cgacttgggcaggaggttggctacaccattcggtttgaggactgtactagtacggaaacc
aagattaaatacatgacagatggaatgctgttgagagaatgtcttcttgaccctgatctt
aatcaatatgcaattgttatacttgatgaggctcatgaacgcacaataagcacagatgtt
ctttttggattaatgaagaaaactgtgaaaaagcgccctgatttgaagttgattgtgacc
tcagcaactttagatgcagtgaagttctcaacatatttttttgaggctccaatatttaca
atacctggaagaacatatcctgttgagattttgtatacaaaagaggcagagacagattac
ttggatgcttctctcatcactgtaatgcaaatccatttgacagaaccaccaggcgatgtc
ctagtatttttaacaggccaagaggaaattgacacagcctgtgagatactatatgaacga
atgaagagcttgggtcctgacgttccagaactgattattttaccagtatacagtgctcta
ccatcggagatgcaaaccaggatatttgatcctgctcctcctggcagcagaaaggttgta
attgccaccaatattgctgagacatcactgaccatagatggcatatactatgtggttgat
ccaggatttgtcaaacaaaaagtctacaactcaaagtcaggaattgatgcattggtcgtg
acaccaatttcacaggctcaagctaagcaacgctctggtagggcaggtaggacagggcct
ggtaagtgttatcgcctttatacagagcgtgcgtacagagatgagatgctaccaactgca
gtccctgagattcaacgtacaaaccttgcaagtactatactgtctctcaaagccatgggc
atcaatgacctattatcctttgattttatggacccaccaccgatggagacaatgatctca
gctatggagcaactacattccctcagtgccttggacgacgaaggcctactaaccagatta
ggaagaagaatggctgaatttccccttgagccacagttgtccaagatgttaattcagtct
gttcatctaggatgtagtgatgaagtattaaccattgtttccatgctatctgttcaaaac
gtcttctatagaccaaaggacaaacaggctcttgcagaccaaaaaaaggctaagttccat
cagtcagagggagaccacatgaccttgcttgcagtgtataattcgtggaagaacaacaaa
ttctcaaacccctggtgttttgaaaactttgtgcaggccaggtcgttgaggcgagctcaa
gacatcaggaaacaaatgcttggaattatggacaggcacaaattagatgttgtatcatgt
gggaagacaacttcacgtgctcaaaaggctataacaagtgggttctttcgcaatgctgca
agaaaagacccacaggaaggttaccgtacagtgactgataaccaggttgttttcattcac
ccctcaagtgcgctatttaatcgtcagccagagtgggtggtatatcatgagcttgtcctt
acaacaaaggaatacatgagggaagttaccacagttgatccaaaatggcttgtggaattt
gcaccggcatttttcaaaatgggaaatccaaccaagctgagcaagcgcaagagacaagaa
agattggagccgctgtataaccggtatgaagaaccaaatgcttggagaatttcaagagcc
tttagaaggaggtga
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