Montipora capricornis (leaf plate montipora): 138058239
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Entry
138058239 CDS
T10557
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03040
Spliceosome
Brite
Enzymes [BR:
mcaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138058239
Spliceosome [BR:
mcaz03041
]
Complex C
Other components
Step II factors
138058239
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HA2_C
Helicase_C
S1
HA2_N
DEAD
GIPC1_GH2
AAA_22
AAA_19
nSTAND3
T2SSE
AAA_16
PhoH
TsaE
PAT1
Motif
Other DBs
NCBI-GeneID:
138058239
NCBI-ProteinID:
XP_068760249
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All DBs
Position
1:13519670..13686319
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AA seq
1296 aa
AA seq
DB search
MDELQQLEQLSLVSKICTELDNHLGINDKDLAEFIIMLSEKNPTLDKFRAALAENGAEFP
ESFTSNLLRLIQKMQPIKSGIGDQNPGRSVEGKENSVTGVEQKRSSFPGLCIPDEIAGGN
KSQEEDEKVASFALGELEALMSKAKHSSLKASRKRPRSHSRSPESDKDRQRQKEREKDRR
RYSGSESRSKRKDQPRDNHHGSTSKEKSPCASPVVSQIYNGKVTTIMQFGCFVQMEGLRG
RHEGLVHISQLRREGRVASVGDVVQRGQRVKVKVLSMAGSKISLSIKDVDQDTGEDLNPT
RSRQPVGGEVSEMARNPDRPMGIPVVPVFEDDEPSTKKKVQRITSPEKWEIKQLISAGVL
DKADYPDFDEETGVLPKDDDSDEDIEIELVDEEPAFLRGQTKLSVAMSPVKIVKNPDGSL
QRAAMTQSALAKERRELKQAQREAQADSIPKDLSKLWIDPVPDVGGNKAVFAQDMRGVGL
ANDDMPEWKRATFGGNKASYGKKTNLTILEQRQGLPIYKLRQELLKAVHENQVLIVIGET
GSGKTTQITQYLAEEGFLSIGKLACTQPRRVAAMSVAKRVSEEYGCRLGQEVGYTIRFED
CTSTETKIKYMTDGMLLRECLLDPDLNQYAIVILDEAHERTISTDVLFGLMKKTVKKRPD
LKLIVTSATLDAVKFSTYFFEAPIFTIPGRTYPVEILYTKEAETDYLDASLITVMQIHLT
EPPGDVLVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPP
GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKSGIDALVVTPISQAQAKQRSGR
AGRTGPGKCYRLYTERAYRDEMLPTAVPEIQRTNLASTILSLKAMGINDLLSFDFMDPPP
METMISAMEQLHSLSALDDEGLLTRLGRRMAEFPLEPQLSKMLIQSVHLGCSDEVLTIVS
MLSVQNVFYRPKKALLHAILPSAEYVKTKAIEVTLLRALAPLSLVLGDQDKNVQYYLPPV
DLCYWRISNKPHCICKDCHLFSYDQLCDLKKNTTTPLILRELKDAFCHFEKPIGWWSPIY
LKAFGVFAKDRGLQHTLSSPNGDDAFALKQFLMKPYPQQDLTYVQTQVMLKLARRAKGQF
MTLIEIRVHLIRCKPGHISKTWTLKGRFVTFLSFLASSKNSGNVFGLCANRWLIFRALIP
LQPNKDDIITMATVTLRNWLIKGPSKDVYVPSHVIDTVNPSTGEIVPGSWRDDGITSKNI
LPLAILRHGNKPPNHAKRVRDEFKEYFNSEGVVDWQ
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggatgagctgcagcagcttgaacagctatctcttgtgtctaagatttgcacggagttg
gacaatcacttgggcatcaacgataaggatctcgcggagttcataataatgcttagtgag
aaaaaccccacactggacaagttcagagcagctttggctgaaaatggtgcagaatttcca
gagtcatttacttccaatttgttgagattgattcagaagatgcagcctataaagtcagga
ataggtgatcaaaatccaggcagatcagtggaaggtaaagaaaatagtgtaactggtgtg
gagcagaagcgttcatcatttcctggactatgcattcctgatgaaattgcggggggaaat
aagagccaggaagaggatgaaaaagtggcctcgtttgctcttggtgagctagaagctcta
atgtccaaggcaaagcattcttcattgaaagctagcaggaaaagacccaggtcacattca
agaagtccagaaagcgacaaagacaggcaaaggcaaaaagaacgggaaaaggatagaagg
agatacagtggaagtgaatccagaagtaagagaaaagatcaaccaagagacaaccatcat
ggctctacttcaaaagagaagtcaccctgtgcctctccagttgttagtcaaatctacaat
ggtaaagtgacaacaattatgcaatttggatgctttgtgcagatggaaggcttaagaggt
cgacatgaaggcttggtacacatatctcagctcagacgtgaaggacgagttgctagtgtg
ggtgatgtagtacaaagaggtcaaagggttaaggtgaaagttttgtcaatggccggaagc
aagatcagtctgagcattaaggatgtggatcaagacacaggtgaagacttaaatcctacc
agatctagacagcctgtgggaggtgaagtcagtgagatggcaagaaacccagacagacca
atgggcatcccagttgtacctgtttttgaagacgatgaaccaagtacaaagaagaaagtt
caaaggataacttcaccagaaaagtgggaaataaaacagcttatttcagcaggtgtgttg
gacaaggctgactaccccgattttgatgaagagacaggtgttcttcctaaagatgatgac
tcagatgaggacattgaaattgaacttgtggatgaagagcctgcctttttacgagggcaa
actaaactgagtgtggccatgagtcctgtgaagattgttaagaatcctgatggctccttg
caaagagctgccatgacacaaagtgcgttagcaaaggagaggagagaactcaagcaggct
caaagggaagcacaagcagacagtatacccaaagacctcagcaagctctggattgatcca
gttccggatgtgggtggtaacaaagcagtctttgctcaagacatgcgaggtgttggattg
gcaaatgatgacatgccagagtggaaacgagctacctttggaggaaacaaagcttcctat
ggaaagaaaacaaacttaactatcctggagcaaaggcaaggattacccatatataaacta
cgacaagaacttttaaaggctgtccatgaaaatcaagtgttgattgttatcggagaaaca
gggagtggaaagacgacacagataacacagtacttagcagaagaaggcttcctttctatt
ggtaaacttgcgtgcacccagccccgtcgagtagctgcaatgtctgttgctaagagagta
tcagaagaatatggatgtcgacttgggcaggaggttggctacaccattcggtttgaggac
tgtactagtacggaaaccaagattaaatacatgacagatggaatgctgttgagagaatgt
cttcttgaccctgatcttaatcaatatgcaattgttatacttgatgaggctcatgaacgc
acaataagcacagatgttctttttggattaatgaagaaaactgtgaaaaagcgccctgat
ttgaagttgattgtgacctcagcaacgttagatgcagtgaagttctcaacatattttttt
gaggctccaatatttacaatacctggaagaacatatcctgttgagattttgtatacaaaa
gaggcagagacagattacttggatgcttctctcatcactgtaatgcaaatccatttgaca
gaaccaccaggcgatgtcctagtatttttaacaggccaagaggaaattgacacagcctgt
gagatactatatgaacgaatgaagagcttgggtcctgacgttccagaactgattatttta
ccagtatacagtgctctaccatcggagatgcaaaccaggatatttgatcctgctcctcct
ggcagcagaaaggttgtaattgccaccaatattgctgagacatcactgaccatagatggc
atatactatgtggttgatccaggatttgtcaaacaaaaagtctacaactcaaagtcagga
attgatgcattggtcgtgacaccaatttcacaggctcaagctaagcaacgctctggtagg
gcaggtaggacagggcctggtaagtgttatcgcctttatacagagcgtgcgtacagagat
gagatgctaccaactgcagtccctgagattcaacgtacaaaccttgcaagtactatactg
tctctcaaagccatgggcatcaatgacctattatcctttgattttatggacccaccaccg
atggagacaatgatctcagctatggagcaactacattccctcagtgccttggacgacgaa
ggcctactaaccagattaggaagaagaatggctgaatttccccttgagccacagttgtcc
aagatgttaattcagtctgttcatctaggatgtagtgatgaagtattaaccattgtttcc
atgctatctgttcaaaacgtcttctatagaccaaagaaagccctgctacatgctatactt
ccatcggcagagtatgtcaaaacaaaggccattgaggtaactctcttacgtgcccttgca
cctctaagcctagtgctgggcgatcaagacaagaacgtccagtactacctccctccagtt
gatttgtgctattggagaatctcaaacaagccccactgcatctgtaaagactgtcatctt
ttctcctatgaccagttatgtgatctaaagaaaaacaccacgaccccactcattctcaga
gaactaaaggatgcattctgtcactttgagaagcctataggatggtggtccccaatttac
ttgaaggcttttggagtctttgccaaagacaggggtctccaacacaccctctcatctcca
aatggggatgacgcttttgcactgaagcagtttttgatgaagccttatcctcagcaagac
ctcacttatgtccagacacaagtgatgttgaagttggcgagaagagcaaagggacagttc
atgacgcttattgaaatccgcgtgcatctaattaggtgcaaacctggacatatctccaag
acctggaccttgaaaggcagatttgtaacgtttctttcgtttctcgcaagctcgaagaat
agtggaaatgtttttggcctttgtgccaatcgttggctaatatttcgtgctctaattcct
cttcaaccaaacaaagatgatattatcaccatggccactgtcacccttcgcaactggctg
atcaagggaccatcaaaagatgtctatgttccatctcatgttattgacaccgtcaatccg
tccactggtgaaattgttccaggttcctggagagatgatggtattacctccaagaacata
ctgcctttggcaattctgaggcatggcaacaagccacccaaccatgcaaaaagagtgagg
gatgagtttaaagaatatttcaacagtgaaggtgtagttgactggcaatga
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