Montipora capricornis (leaf plate montipora): 138060342
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Entry
138060342 CDS
T10557
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03015
mRNA surveillance pathway
mcaz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138060342
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138060342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaz03019
]
138060342
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
138060342
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
138060342
NCBI-ProteinID:
XP_068762198
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Position
8:35756465..35773447
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AA seq
538 aa
AA seq
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MAGEGAVDIDLYATVDEFEPEVAGQHHLTEGLDLYDDVLTTGSEMPVGPEDEVLQTQYDD
VTSEIPQEEVAQSGVYEYKSYTTVHPKSAAARSSNSYYERTKGQPLYVGNLTWWTNDQEL
TEALQECGVTDLINIKFFENRTNGQSKGFAMIELGSDTSVQLVTEKLPKMEIHSQLPVVT
PATKQYLQQFEAQSRKNNPGSGNSQAEQEAPPYQHGGGRGFGFNRGGFRGRGFPVRPGMG
GGFDHRPPPPGDMGRGAPWMGPGHMGMPRHPPPGMPPYRMEHPPPFYPMVPPPGGDKPLG
PMPPQVHVPPKEARYFLADRKEITEQPSWHEEKRCHEVYFGIQQKPLSTHLKGMVPQFPK
PPVAAHVNPAFFPEGPLPETFLAAGAAANVSRVDAMSQFMPRPGDEFSESMKRNQVLASS
AIKRAMSDANSGDYESGIETLVGAISLIKQSPTAAEERCQVLVQSLQDCLQGLEMQLLER
RSTGSKHHYSDKDDYEGETREKRHRRRRSRSRSRDRDRRSRSRDKRSRSRDRERRHRR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgagggagcggtagatattgatttgtacgccacagtagatgagtttgagcct
gaggttgctggccagcaccatttgacggaagggttggatctgtatgatgacgtgctcact
actgggagtgaaatgcctgttggaccagaagatgaagttttgcagacacagtatgatgat
gttaccagtgaaattccccaagaggaagtagctcaatcaggggtatatgaatataagtca
tacactacagtccatcctaaatctgctgcagcccgttcttccaacagttactacgaacga
accaagggacaaccattgtatgttggcaatttgacgtggtggacaaatgatcaagagttg
acagaagccttgcaagagtgtggtgttactgaccttatcaacatcaaattctttgaaaac
agaaccaatggtcagtccaaaggatttgcaatgattgagctcggatctgacacatcagtt
caacttgttactgaaaaactgcctaaaatggaaattcattcacagttaccagtggttaca
ccagcaaccaaacagtacttgcagcagtttgaggcacaatccaggaaaaataacccaggc
tctggtaattcacaagcagagcaagaagctcccccctaccaacacggaggaggcagaggc
tttgggttcaaccgtggtggattcagaggccgtggatttcctgtacgtccgggaatggga
ggagggtttgatcacagacccccaccacctggtgatatgggacgtggagcaccttggatg
ggacctggacacatgggaatgcccaggcatcctccacctggtatgccaccgtatcgtatg
gaacacccccctccattttaccctatggttcctcctccagggggggacaagccactgggg
ccaatgccaccacaagtccatgtgccaccgaaagaggcacgttatttcttagcagatcgg
aaagaaattactgaacaaccttcatggcacgaagaaaaaagatgtcatgaagtttatttt
ggcattcaacaaaaacctttatcaactcacttgaaaggtatggtaccacagtttccgaag
cctcctgtagcagcgcatgtcaaccctgcattttttcctgaaggacctctgccagagaca
ttcctagctgccggtgctgcagcgaatgtcagtcgagtggatgcgatgtcacaattcatg
cccaggccaggagatgaattcagcgagtcgatgaagagaaatcaagtgctcgccagcagc
gctataaagcgagcaatgtcggatgcgaactcgggtgattatgaaagtggaatagagacg
ttagttggcgcgatatcactcatcaaacagtcaccaacggcagctgaggagcgatgccag
gtgctagttcagtcgttacaagattgtcttcaaggactggagatgcagctgctggaaaga
aggtcgacaggcagtaaacatcattacagcgacaaagatgattatgaaggagaaaccagg
gaaaaacgacacaggcgcagacggtcacggtctaggtcacgcgacagggataggagatca
aggtcacgtgacaagcgctcccggtcgcgtgaccgagagcgccgccatcgaagatga
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