Mycolicibacterium chubuense: Mycch_0540
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Entry
Mycch_0540 CDS
T02150
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mcb
Mycolicibacterium chubuense
Pathway
mcb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mycch_0540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcb03019
]
Mycch_0540
03110 Chaperones and folding catalysts [BR:
mcb03110
]
Mycch_0540
03029 Mitochondrial biogenesis [BR:
mcb03029
]
Mycch_0540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcb04147
]
Mycch_0540
Enzymes [BR:
mcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Mycch_0540
Messenger RNA biogenesis [BR:
mcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Mycch_0540
Chaperones and folding catalysts [BR:
mcb03110
]
Heat shock proteins
HSP60 / Chaperonin
Mycch_0540
Mitochondrial biogenesis [BR:
mcb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Mycch_0540
Exosome [BR:
mcb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mycch_0540
Exosomal proteins of other body fluids (saliva and urine)
Mycch_0540
Exosomal proteins of breast cancer cells
Mycch_0540
Exosomal proteins of colorectal cancer cells
Mycch_0540
Exosomal proteins of bladder cancer cells
Mycch_0540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4844
Rv2466c-like
Motif
Other DBs
NCBI-ProteinID:
AFM15359
UniProt:
I4BDK2
LinkDB
All DBs
Position
557289..558914
Genome browser
AA seq
541 aa
AA seq
DB search
MAKTIAYDEEARRGLERGLNSLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIE
KAVEKVTETLLKSAKEVETKEQIAATAAISAGDTQIGELIAEAMDKVGNEGVITVEESNT
FGLQLELTEGMRFDKGYISGYFVTDAERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVIS
EEVGLSLETADVSLLGKARKVVVTKDETTIVEGAGDSDAIAGRVAQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQS
APALEELNLSGDEATGANIVRVALSAPLKQIAFNGGLEPGVVAEKVTNSPAGTGLNAATG
EYEDLLKAGVADPVKVTRSALQNAASIAALFLTTEAVVADKPEKAAAPAGDPTGGMGGMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacaattgcgtatgacgaagaggcccgtcgcggcctcgagcggggcctcaac
agcctcgccgacgcggtaaaggtgacgctgggccccaagggccgcaacgtcgtcctcgag
aagaagtggggtgcccccacgatcaccaacgatggtgtgtccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgctgagctggtcaaggaagtcgccaagaagacc
gacgacgtcgcgggtgacggcaccaccaccgccaccgtgctggctcaggcgctcgttcgc
gagggcctgcgtaacgtggccgccggcgccaacccgctcggcctcaagcgcggcatcgag
aaggccgtcgagaaggtcaccgaaacgctgctgaagtcggccaaggaggtcgagaccaag
gagcagatcgctgccaccgcggcgatctccgccggcgacacccagatcggcgagctcatc
gccgaggccatggacaaggtcggcaacgagggtgtcatcaccgttgaggagtccaacacc
ttcggcctgcagctcgagctcaccgagggcatgcggttcgacaagggctacatctcgggg
tacttcgtgaccgacgccgagcgtcaggaagccgtcctggaggatccctacatccttctg
gtcagctccaaggtgtcgacggtcaaggacctgctcccgctgctggagaaggtcatccag
tccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtccaccctg
gtggtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggcgccgggcttcggt
gaccgccgcaaggcgatgctgcaggacatggcgatcctcaccggcggccaggtcatcagc
gaggaggtcggcctgtcgctcgagaccgccgacgtgtccctgctgggcaaggcccgcaag
gtcgtcgtgaccaaggacgagaccaccatcgtcgagggcgccggtgactccgacgccatc
gccggccgggtggcccagatccgcgccgagatcgagaacagcgactccgactacgaccgc
gagaagctgcaggagcgcctggccaagctggccggcggtgttgcggtgatcaaggccgga
gctgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggccgccgtcgaggagggcatcgtcgccggtggcggcgtggccctgctgcagtcg
gccccggcgctggaggagctcaacctcagcggtgacgaggcgaccggcgccaacatcgtg
cgcgtcgcgctgtcggcaccgctgaagcagatcgccttcaacggtggcctggagcccggc
gtcgtcgccgagaaggtcaccaactcgcccgccggcaccggcctcaacgccgccaccggt
gagtacgaggacctgctcaaggctggcgtcgccgacccggtgaaggtcacccgctcggcg
ctgcagaacgcggcgtccatcgcggcgctgttcctcaccaccgaggccgtcgtcgccgac
aagccggagaaggccgccgcacccgccggcgacccgaccggtggcatgggcggtatggac
ttctaa
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