Mycolicibacterium chubuense: Mycch_0863
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Entry
Mycch_0863 CDS
T02150
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mcb
Mycolicibacterium chubuense
Pathway
mcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mycch_0863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcb03400
]
Mycch_0863
Enzymes [BR:
mcb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Mycch_0863
DNA repair and recombination proteins [BR:
mcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mycch_0863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFM15677
UniProt:
I4BEH0
LinkDB
All DBs
Position
complement(873938..877252)
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AA seq
1104 aa
AA seq
DB search
MAMEPFDLLGPLPAPRTTTVLEASAGTGKTFALAGIVTRYVAEGVATLDQMLLITFGRAA
SQELRERVRLQILDALLAFDDPARAGGNAIIAHLLAGTPGQRAERKQRLRDALAGFDAAT
IATTHQFCQLVLKSLGVAGDSDSRVALVENLDDLVAEIVDDLYLAHFGQERDEPLLGYED
ALKLAREVVGNAHTELRPTNPAPGSDPAVRVQFASAVCAELETRKRKLGILHYDDLLSRL
ATALAAEDSPARARMQRRWSIVMVDEFQDTDPVQWQVIDCAFSGHSTLILIGDPKQAIYA
FRGGDIVTYLNAAATAGEQKTLDTNYRSDGPLVDSLQAVMRGAQLGDPRIVVHRVAANHT
AHRLAGAPRNEPFRLRVVNRDQFGIRPDRPIPIDTLRRHIPQDMAADIAALLASGATFCD
RPLEPGDVAVIVESHRDGHACFDALTAAGIPAVYTGDSDVFTSPAADDWLCLLEAFDQPH
RSGLVRAAAATMFFGETAETLAAQGDALTDRVAATLRQWADHARERGVAAVFEAAQLSGM
TQRVLSWVDGERHMTDLAHLTQVLHDTAHREHFSLPALRDWLRTQRDQPGGAVERNRRLD
SDAAAVQIMTVWVSKGLQFPVVYLPFAFNRNIQTRDVVMFHDGDTRCLHIGGELSPDHAA
AQQQGRREAAGDDVRLTYVAMTRAQSQVVAWWAPSNDEPNGGLSRLLRGRAPGEPVVPER
CDPPRIDDPDALALLRAWADAGGPVLEDSVPAAATEVERPPAPTDLRARHFHRQIDTAWR
RTSYSGLIRASEDTAGVSSEPERTELDDEGADVPLYEVPDAGAAVPSPMAALPTGAKFGT
LVHAVLETADPLARDLAAELEQQIRRHSVWWPVDAEPADLAAALVPMHDTPLGPLAPGVT
LRQIGLRDRLRELDFEFPLAGGDLRGGAAAITLADVGRLYRAHVPADDVLGSYAARLSSG
TLASQSLKGYLTGSVDAVLRLPGGRFVVVDYKTNWLGEPDAPLTAADYSRARMTDAMLHS
DYPLQALLYCVVLHRFLRWRLPGYDPARHLGGVLYLFVRGMCGPDTPVVDGHPAGVFSWE
PPGSLIVEVSDLLDGAPASARLVG
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggagcccttcgacctgctcggcccgctgccggcgccgcgcaccacgacggtg
ctggaggccagcgccggcaccggcaagacgttcgctctggccgggatcgtcacgcgttac
gtcgccgagggggtcgccaccctcgatcagatgctgctgatcaccttcggccgcgccgcc
agccaggaactgcgggaacgggtgcgcttgcagatcctcgacgctctgctggccttcgac
gacccggcgcgcgccggcggcaacgcgatcatcgcgcacctgctggccggcacacccggt
cagcgcgccgagcgcaaacagcggctgcgcgacgcgctggccggcttcgacgccgcgacc
atcgccaccacccaccagttctgccaactggtcctgaaatccctcggcgtcgccggagac
agcgactcgcgggtggcgctggtggagaatctcgacgacctggtcgccgagatcgtcgac
gacctgtacctggcgcacttcgggcaggaacgcgacgagccgctgctgggctacgaggac
gcgctcaagctcgcgcgggaggtggtcggcaacgcccacaccgaactgcggccgacgaac
ccggccccgggatccgatcccgcggtgcgcgtgcaattcgcgtccgcggtctgtgcggag
ctcgagacacgcaagcgcaagctgggcatcctgcactacgacgacctgctctcccggctg
gccaccgcgctggcggccgaggattcgccggcccgcgcgcgcatgcagcggcgctggtcg
atcgtgatggtcgacgaattccaggacaccgaccccgtgcagtggcaggtcatcgactgc
gcattcagcggccactcgacgctgatcctcatcggtgatccgaagcaggcgatctacgcg
ttccgcggcggcgacatcgtcacgtacctgaacgcggcggcgacggccggcgagcagaag
accctggacaccaactaccgcagcgacggcccgctcgtggacagtctgcaggccgtcatg
cgcggcgcacagctcggcgacccccgcatcgtcgtgcacagggtcgcggccaaccacacc
gcgcaccgcctggccggcgccccgcgcaacgagccgttccggctgcgggtggtcaaccgc
gaccagttcgggatccggccggaccgcccgatcccgatcgacacgctgcgcaggcacatc
ccgcaggacatggcggccgacatcgcggcactgctcgcgagcggggcgacgttctgcgac
cggccgctggaacccggcgacgtcgcggtgatcgtcgagagccaccgcgacggccacgcg
tgtttcgacgcgctgaccgccgccggcatcccggccgtctacaccggcgactccgacgtc
ttcacctcccccgcggccgacgactggctctgcctgctggaagccttcgaccagccgcac
cggtccgggctggtgcgcgccgcggccgccacgatgttcttcggcgagaccgcggaaact
ctggccgcacagggcgatgcgctgaccgatcgcgtcgccgcaacgctgcggcagtgggcc
gatcacgcccgcgaacggggggtggccgcggtgttcgaggccgcgcaactgtccgggatg
acgcagcgtgtgctgtcgtgggtcgacggcgaacgccacatgaccgacctcgcgcacttg
acgcaggtgctgcacgacaccgcccaccgcgagcacttcagcctgccggcgctgcgggac
tggctgcgcacgcagcgtgaccaaccgggcggcgcggtggagcgcaaccggcgcctcgac
agcgacgcggcggcggtgcagatcatgacagtgtgggtcagcaagggcctgcagttcccg
gtggtgtacctgccgttcgcgttcaaccgcaacatccagacccgcgacgtggtgatgttc
cacgacggcgacacccgatgtctgcacatcggcggcgaactcagccccgatcacgcggcg
gcacagcagcagggccgccgcgaggcggccggtgacgacgtgcggctcacctatgtggcg
atgacgcgggcgcagtcccaggtggtcgcatggtgggccccgtcgaacgacgaacccaac
ggcggcctgtcccggttgttgcgcggccgcgcgccgggcgaaccggtggtcccggaacgc
tgcgacccgccgcggatcgacgacccggatgcgctggcgttgctgcgcgcgtgggcagac
gcgggcggtcctgtcctggaggactcggtccccgccgccgccaccgaggtcgagcgaccg
ccggcgccgaccgatctgcgggcccggcactttcaccggcagatcgacaccgcgtggcgc
cggacctcgtattcggggctgatccgggcctcagaggacaccgcgggcgtgtccagtgag
cccgagcgcaccgagctcgacgacgaaggtgccgacgtcccgctctacgaggtgcccgac
gcgggcgccgcggtgccctcccccatggcggctctgcccaccggcgcgaagttcggcacc
ctggtgcacgccgtgctggagaccgccgatcccctggcgcgcgacctcgccgccgaactc
gagcagcagatccgcaggcactcggtgtggtggccggtcgacgcggagcccgcggacctg
gccgccgcgctggtcccgatgcacgacacgccgctcggcccgctcgcgccgggtgtgacg
ctgcgccagatcggcctgcgggaccggttgcgggagttggacttcgagttcccgctcgcc
ggtggcgacctgcgcggcggcgcggctgcgatcacgctcgccgacgtgggccgtctctac
cgggcgcacgtccccgccgacgacgtgctcgggtcgtatgcggcccggctgagcagcggg
acgctggcgtcccagtcgctcaagggctacctgaccgggtccgtcgacgccgtgctgcgg
ttgcccggcggccggttcgtcgtcgtcgactacaagaccaactggctcggcgaacccgac
gcgccgctgaccgccgccgactattcgcgcgcgcggatgaccgacgcgatgctgcactcg
gactacccgctgcaggcgctgctgtattgcgttgtgctgcaccggttcctgcgctggcgg
ctgccgggctacgatccggcccggcatctgggcggcgtcctgtacctcttcgtgcggggc
atgtgcggtccggacacgccagtcgtcgacggtcacccggcgggtgtgttcagctgggag
ccgccgggctcgctcatcgtcgaggtgtcggatctgctcgacggcgcccccgcatcggcg
agactggtcggatga
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