Mycolicibacterium chubuense: Mycch_1422
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Entry
Mycch_1422 CDS
T02150
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcb
Mycolicibacterium chubuense
Pathway
mcb03420
Nucleotide excision repair
mcb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mycch_1422
03430 Mismatch repair
Mycch_1422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcb03400
]
Mycch_1422
Enzymes [BR:
mcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mycch_1422
DNA repair and recombination proteins [BR:
mcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mycch_1422
MMR (mismatch excision repair)
Other MMR factors
Mycch_1422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Helicase_Sgs1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AFM16224
UniProt:
I4BG17
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All DBs
Position
1453059..1455182
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AA seq
707 aa
AA seq
DB search
MMVAMSPTASRDRLLGDLDEEQREAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVSAGHV
APGQVLAVTFTQRAAGEMRGRLRALDDGAGTGGVQAVTFHAAARRQLSYFWPRVVGATDW
QLLDTKFAIVAQAANRAGLPTGTDNVRDLAGEIEWAKASLISPEDYPGAVAERGRDIPFD
AAKVAAVYIGYETLKTRGNDLVLLDFDDLLLHTAAAIENDAAVAQEFRDRYRCFVVDEYQ
DVTPLQQRVLDAWLGTRDDLTVVGDANQTIYSFTGASPRYLLDFSRRFPDAAVVRLERDY
RSTPQVVSLANRVIAAARGRMAGSKLHLVGQRPPGPNPTFHEYPDEVAEAAAVARSVKKL
IESGTSAAEVAVLYRINAQSEVYEEALTEVGVPFQVRGGEGFFSRQEIRQALLALQRVGD
RGQDGTTGPLPEVVRAVLEPLGLTAEPPAGTRARDRWEALVSLAELVDDEVAQRPQLDLR
GLLSELRQRADARHPPVVQGVTLASLHAAKGLEWDAVFLVGLADGTLPISHALSHGPDSE
PVEEERRLFYVGITRARVHLALSWALARNPGGRQGRRPSRFLNGIAPQSQRDDGPNRPRK
PRGPAPRCRVCNAALTSSPAIMLRRCETCPSDIDEQLLADLKDWRLRISKEMSVPAYVVF
TDNTLIAIAETLPTDDAALVAIPGIGARKLEQFGPDVLALVKGRQKS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcgccatgtcccccacagcgtcgcgcgaccggctgctgggcgacctcgacgag
gagcagcgcgaggcggtgctcgcgccccgcggtccggtgtgcgtgctggccggtgcgggc
accggaaagacccgcaccatcacccggcgcatcgcgcacctggtgagcgccgggcacgtg
gcgcccggtcaggtgctcgcggtgacgttcacccagcgcgccgcgggggagatgcggggc
cggctgcgcgccctggacgacggcgccgggacgggtggcgtgcaggccgtgacgttccac
gccgccgcgcggcggcagctgtcgtatttctggccccgcgtggtcggcgccaccgactgg
cagctgctcgacaccaagttcgcgatcgtcgcccaggccgccaaccgcgccgggctgccc
accggcaccgacaacgtccgtgacctcgccggtgagatcgagtgggcgaaggcctcgttg
atcagtcctgaggactatccgggcgcggtcgccgagcgcggccgcgacatcccgttcgac
gcggcgaaggtcgccgcggtctacatcggctacgagacgctcaagacccgcggcaacgat
ctcgtgctcctcgacttcgacgacctgctgctgcacaccgccgccgcgatcgagaacgac
gccgcggtggcccaggaattccgggaccggtaccgctgcttcgtggtcgacgagtaccag
gacgtcaccccgctgcagcagcgggtcctcgacgcgtggctcggcacccgggacgatctc
accgtggtcggcgacgcgaaccagaccatctactcgttcaccggcgcatcgccgcgctac
ctgctcgacttctcccggcgcttccccgacgcggcggtggtccggctggaacgcgactac
cgatccaccccgcaggtggtctcgctggccaacagggtcatcgccgcggcgcgcggacgg
atggcgggcagcaagctgcatctggtcgggcagcggccgcccggccccaatccgacgttc
cacgagtaccccgacgaggtcgccgaggccgccgcggtggcccgcagcgtcaagaagctg
atcgaatccggcaccagcgcagcagaagtcgccgtgctctaccgcatcaacgcgcaatcc
gaggtgtacgaggaggcgctgaccgaggtgggcgtcccgttccaggtgcgcggaggcgaa
gggttcttcagcaggcaggagatccggcaggcgctgctggcgctgcagcgggtgggcgac
cgggggcaggacggcaccacgggcccgctgccggaggtcgtgcgggcggtgctcgagccg
ctcgggctgacggccgagccgccggcgggcacccgggcgcgcgaccggtgggaggcgctg
gtctcgctggccgaactcgtcgacgacgaggtcgcgcagcggccccagctcgacctgcgc
gggcttctgagcgagctgcgacagcgcgccgacgcccgtcatcctccggtggtgcaggga
gtcacgctggcgtccctgcacgcggccaaggggctggagtgggacgcggtgttcctcgtc
gggctggccgacggcacgctgccgatctcccatgcgctctcccacggtcccgacagcgag
ccggtggaggaggagcggcgtctcttctacgtcggaatcacaagagcacgtgttcatttg
gcgctcagctgggcgttggcgcgcaacccgggcggtcgccaggggcgccggccgtcgcgg
ttcctcaacggcatcgcgccgcagtcgcagcgtgacgacggcccgaaccggccacgcaaa
cctcgcggccccgcaccgcgctgccgggtgtgcaacgccgcgctcacgtcgtcgccggcg
atcatgctgcgccgctgcgaaacgtgtccgtccgacatcgacgagcagttgctcgccgat
ctcaaggactggcgactgcgcatttccaaggagatgagcgtgccggcctatgtggtgttc
accgacaacacgctgatcgcgatcgccgagaccctgccgaccgacgacgccgcactggtc
gccattcccggcatcggtgcccgcaagctcgagcagttcggcccggatgtcctcgcactg
gtcaaaggccgccaaaaatcgtga
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