Mycolicibacterium chubuense: Mycch_1855
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Entry
Mycch_1855 CDS
T02150
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mcb
Mycolicibacterium chubuense
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcb03032
]
Mycch_1855
03036 Chromosome and associated proteins [BR:
mcb03036
]
Mycch_1855
03400 DNA repair and recombination proteins [BR:
mcb03400
]
Mycch_1855
DNA replication proteins [BR:
mcb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Mycch_1855
Chromosome and associated proteins [BR:
mcb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Mycch_1855
DNA repair and recombination proteins [BR:
mcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Mycch_1855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HC2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AFM16642
UniProt:
I4BH85
LinkDB
All DBs
Position
1926212..1926862
Genome browser
AA seq
216 aa
AA seq
DB search
MNKAELIDVLTEKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVAGAQKLPAEGPAVKRGVTAGSTARKAAKKAP
AKKAAAKKAAPAKKAPAKKAAPAKKAATKAPAKKATAAKKAAPAKKAPAKKATAAKKAAP
AKKAPAKKAAAKAPAKKAAAAKKAPAKKAPAKRGRK
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcagagctcatcgacgtactcacggagaagttgggctcggatcgtcggcaa
gcgaccgcggcggtggagaacgtcgtcgacaccatcgtgcgcgccgtgcacaagggtgac
agcgtcaccatcaccgggttcggcgttttcgagcagcgccgtcgggcggcccgcgtggcg
cgcaatccgcgcaccggcgagacggtgaaggtcaagcccacatccgtgcctgcgttccgt
cccggcgctcagttcaaggcggttgtcgctggcgcacagaagctcccggccgaggggccc
gcggtgaagcgcggcgtcactgccggcagcactgcccgcaaggccgcgaagaaggcgccg
gcgaagaaggccgcagccaagaaggctgctcctgccaagaaggctccggccaagaaggcc
gcccccgccaagaaggctgccaccaaggctccggccaagaaggcgacagccgcgaagaag
gctgctcctgccaagaaggctccggccaagaaggcgacagcggcgaagaaggctgctcct
gccaagaaggctccggccaagaaggctgccgccaaggctccggccaagaaggcggcggcc
gcgaagaaggctcccgcgaagaaggctccggccaaacgcggtcgcaagtaa
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integrated database retrieval system
