Mycolicibacterium chubuense: Mycch_2157
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Entry
Mycch_2157 CDS
T02150
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
mcb
Mycolicibacterium chubuense
Pathway
mcb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Mycch_2157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcb03021
]
Mycch_2157
Transcription machinery [BR:
mcb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mycch_2157
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Nop14
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AFM16940
UniProt:
I4BI33
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Position
complement(2223503..2224993)
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AA seq
496 aa
AA seq
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MAATKAGPATDEPVKRTATKTPAKKASAKTANGSAPAKKAAKSAPAKATKARAAKSADAP
AARGRAKKGGAADPEVTEGLAGDDLDSNDELESEPGEDLEVEDTDIELDDIDVDDDAGDD
TEDEDGEADDAAEGADGAAPKVAKKAVDKAEDDSDGLPEPSEKDKASGDFVWDEEESEAL
RQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQLMAELAEKGEK
LPAAQRRDMLWICRDGDKAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAV
EKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGR
EPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVS
FTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMS
KLRHPSRSQVLRDYLD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgacaaaggcaggcccggcaaccgatgagccggtgaagcgcaccgccaccaag
acgcccgccaagaaggcctcagcgaagaccgccaacggctcggcgcccgcgaagaaggcc
gccaagagcgccccggcgaaggccaccaaggcgcgtgccgcgaaatccgccgacgcaccg
gccgcccgcggccgcgcgaagaagggcggtgccgccgaccccgaggtgaccgagggcctg
gcgggcgacgatctcgacagcaacgacgaactcgagtccgagcccggtgaggacctcgag
gtcgaggacaccgatatcgaactcgacgacatcgacgtcgacgacgatgccggcgacgac
accgaggacgaggacggcgaggccgacgacgccgccgaaggcgccgacggggccgcgccc
aaggtcgccaagaaggccgtcgacaaggccgaggacgactccgacggcctccccgagccg
tccgagaaggacaaggcgtccggcgacttcgtctgggacgaggaagagtccgaggctctg
cggcaggcccgcaaggacgcggagctgacggcctcggccgactcggttcgcgcgtacctc
aagcagatcggcaaggtcgcgctgctcaacgccgaggaggaggtcgagctcgccaagcgg
atcgaggccggcctctacgccactcagctgatggccgagctggccgagaagggcgagaag
ctgcccgccgcacagcggcgggacatgttgtggatctgccgcgacggagacaaggcgaaa
aaccacctgctggaggcgaacctgcgtctggtggtgtcgctggccaagcgctacaccggc
cgcggcatggcgttcctggacctgatccaggagggcaacctgggtctgatccgcgcggtg
gagaagttcgactacaccaagggctacaagttctcgacgtacgcgacgtggtggatccgg
caggccatcacccgcgcgatggccgaccaggcccgcacgatccgcatcccggtgcacatg
gtcgaggtcatcaacaagctcggccgcatccagcgtgagctgctgcaggacctgggccgc
gagcccacgcccgaggagctcgccaaggagatggacatcacgccggagaaggtgctggag
atccagcagtacgcgcgtgagcccatctcactggaccagaccatcggcgacgagggcgac
agccaactcggcgacttcatcgaggactccgaggccgtcgtggccgtcgatgcggtgagc
ttcacgctcctgcaggatcagctgcagtcggtgctcgagacactgtccgagcgcgaagcc
ggcgtggtgcggctgcggttcggcctgaccgacggacagccgcgcacgctcgacgagatc
ggtcaggtctacggcgtcacccgtgagcgcatccggcagatcgagagcaagacgatgtcg
aaactgcgccatcccagccgttcccaggttctgcgggattacctcgattag
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