Mycolicibacterium chubuense: Mycch_3194
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Entry
Mycch_3194 CDS
T02150
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mcb
Mycolicibacterium chubuense
Pathway
mcb03030
DNA replication
mcb03430
Mismatch repair
mcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mycch_3194
03430 Mismatch repair
Mycch_3194
03440 Homologous recombination
Mycch_3194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcb03032
]
Mycch_3194
03400 DNA repair and recombination proteins [BR:
mcb03400
]
Mycch_3194
Enzymes [BR:
mcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mycch_3194
DNA replication proteins [BR:
mcb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mycch_3194
DNA repair and recombination proteins [BR:
mcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mycch_3194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
AFM17943
UniProt:
I4BKY6
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All DBs
Position
3334643..3336514
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AA seq
623 aa
AA seq
DB search
MGQLSFADVDPLADPTLRETTFVVVDLETTGGRPTGEKHDAITEIGAVKVRGGEVLGEFA
TLVDPGRSIPPQIVALTGITSAMVYDAPRIEAVLPAFLEFSHGAVLVAHNAGFDIGFLRA
AAERNHVPWPKPPVLCTVRLARRVLTRDEAPSVRLSALAQLFGASTTPTHRALDDARATV
DVLHGLIERVGNQGVHTYPELRAYLPDVTPAQRSNRHLARALPRSPGVYLFRGPSAEVLY
VGTAVDLRRRVTQYFNGADPRARMKEMASLATAVDHVECAHDLEAGVRELRLLAAHAPPY
NRRSRFPHRWWWLTLTDEPFPRFSAVRSPRTDRVVGPFRSRADALESAALMARFTGVRTC
ANRLGRSALHGTACPEREVSPCPAVRGARADEYAAAVEDALALIDGRSSRALTAMLAHIS
GLAERKRYETAARLRDHAAATIDVLWRGQRLRALAGISELVAARPDGDRGWRLAVVRCGQ
LAAAGVAPRGVPPMPVVESLCAAAQSVLPEPGPLGGALVEETALVARWLAQPGVRIVRTE
SGYCSPIGAAGRWSQWAASARSARLAAEQITEQFAAGPHGGGSELLSEPHPTREQLFGRP
GVDRLLRPREAGLPGRNPLGVAG
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagctcagcttcgcggacgtcgatccgctcgctgacccgacgttgcgggagacc
acgttcgtcgtcgtcgacctggagaccaccggcggccgcccgacgggcgagaagcacgac
gccatcaccgagatcggggcggtgaaggtgcgcggcggcgaggtgctcggcgagttcgcc
accctcgtcgacccggggcgcagcatccccccgcagatcgtcgcgctcaccggcatcacg
tcggcgatggtctacgacgccccgcgcatcgaagcggtgctgccggccttcctcgagttc
tcccacggcgccgtgctcgtggcgcacaacgcgggcttcgacatcggattcctgcgcgca
gcggccgaacgcaatcacgtgccgtggcccaaaccgcctgtgctgtgcaccgtccggctc
gcgcgccgcgtcctgacccgggacgaggcacccagcgtgcggctgtccgccctggcccag
ctgttcggcgcgtccaccacgcccacccaccgcgccctcgacgacgcgcgggccaccgtc
gacgtgctgcacggcctgatcgaacgggtgggcaaccagggggtgcacacgtacccggaa
ttgcgcgcctacctgccggacgtgacaccggcccagcgcagcaaccggcatctggcccgg
gcgctgccgcgcagtcccggcgtgtacctgttccgcggcccgtcggccgaagtgctctac
gtcggcaccgccgtggatctgcggcgccgcgtgacgcagtacttcaacggcgccgacccg
cgggcgcggatgaaggagatggcgtcgctggccaccgcggtcgaccacgtcgagtgcgca
cacgacctcgaagccggcgtgcgggagctgcgcctgctggccgcgcacgcgccgccgtac
aaccggcgctccaggttcccccaccgctggtggtggctgacgctgaccgacgagccgttc
ccgcgcttctccgcggtgcgcagcccccgcaccgaccgggtggtcggaccgttccggtcg
cgggcggatgccctcgagtcggcggcgctgatggcgcggttcaccggcgtccgtacgtgc
gccaaccggctgggccggtcggcgctgcacggtacggcctgccccgaacgcgaggtctcc
ccctgcccggccgtgcgcggcgcgcgcgccgacgagtacgccgccgcggtggaagacgcg
ctcgcgctgatcgacggccgcagcagccgcgccctgaccgcgatgctcgcccacatctcc
gggctcgccgaacgcaagcgctacgagacggcggcccggctgcgcgaccacgccgccgcc
accatcgacgtgctctggcgcggccagcggttgcgcgcgctggccggaatcagcgagctg
gtggccgccagacccgacggcgaccgcgggtggcgcctcgccgtggtccgctgtggccaa
ctggccgccgcgggcgtggcaccgcgtggcgtgcccccgatgccggtcgtcgaatctctt
tgtgcagcagcgcaatcggtgcttcccgaacccgggccgctgggcggtgcgctggtcgag
gagacggcactcgtcgcacgctggctcgcgcagccgggcgtgcgcatcgtgcgcaccgag
tcgggctactgctcaccgatcggcgccgcgggacgctggtcgcagtgggcggcctcagcg
cgctcggcgcgcctggccgccgaacagatcacagagcagttcgccgccgggccgcacggc
ggcggctcagagctgctgagtgaaccgcacccaacgcgcgagcagctgttcggccgcccc
ggagtcgatcgcctccttcgcccgcgcgaggccggactcccaggccggaacccacttggc
gtcgctggatag
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