Mycolicibacterium chubuense: Mycch_3542
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Entry
Mycch_3542 CDS
T02150
Name
(GenBank) putative ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
mcb
Mycolicibacterium chubuense
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcb03400
]
Mycch_3542
DNA repair and recombination proteins [BR:
mcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Mycch_3542
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
AAA_30
FtsK_SpoIIIE
AAA_16
Zot
AAA_10
ResIII
DUF5852
T2SSE
CbiA
AAA_6
Motif
Other DBs
NCBI-ProteinID:
AFM18278
UniProt:
I4BLX1
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All DBs
Position
complement(3737427..3739010)
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AA seq
527 aa
AA seq
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MTTDPAGTSAQQIAAGYAADGAALELGTVVVDGACDPAARVRVPLATVNRHGLVAGATGT
GKTKSLQVLAEQLSAAGVPVVMADVKGDLSGLSRPGQAGERITQRAADTGDAWEPAAFPV
EFLSLGTSGVGVPVRATITSFGPILLSKVLGLNQTQESTLGLIFHWADQRGLPLLDLKDL
RSVIQFLTSDEGKPELKALGAVSPTTAGVILRALVNLEAEGADTFFGEPELEPDVLLRTD
SSGRGVITLLELGTQAARPVMFSTFLMWVLADLFTTLPEVGDLDKPKLVFFFDEAHLLFT
DASKAFLEQVEQTVKLIRSKGVGVFFCTQMPTDVPKEVLSQLGARIQHALRAFTPDDQKA
LTKTVRTYPKTGVYDLESALTSLGIGEAVVTVLSENGVPTPVAWTRMRAPRSLMDTIGPE
AITAAAKASPLQAQYGQTVDRDSAYERLAAKLAPPAAPVPPSAPAPPRVEVPPPLEVPPM
PAPAPETGFFDKMMESPAFKSAMRSAGTVIGREITRSLFGTGRRRRR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggaccccgcaggcacctctgctcagcagatcgccgctggttatgccgctgat
ggggcggcgctggaactcggaacggtcgtcgtcgacggggcgtgcgaccccgccgcccgg
gtgcgcgtgccgctggccacggtcaaccggcacggcctggtggccggcgcgaccggaacg
ggtaagacgaagtctttgcaggtgctcgccgagcagttgtcggcggcgggtgtcccggtg
gtgatggccgacgtcaagggcgatctatccgggctgtcgcgacccggccaggcgggcgaa
aggatcacccagcgggcggccgacaccggtgacgcctgggagccggccgcgtttcccgtc
gagttcctgtcgctgggcacgtccggtgtcggggtgccggtgcgcgccacgatcaccagt
ttcggcccgattctgctgtcgaaggtgttggggctcaaccagactcaggagtccacactg
ggactgatcttccactgggccgaccagcgcgggctgcccttgctggacctgaaggacctg
cgctcggtcatccagttcctgaccagcgacgagggcaagccggaactcaaagcgctcggc
gcggtgtcgccgacgaccgccggggtgatcctgcgcgcgctggtcaacctcgaggccgag
ggcgccgacacgttcttcggcgagcccgaactcgagcccgacgtcctgttgcgcaccgac
tcgtccggccggggcgtcatcacgctgctggagctgggcacccaggccgcgcgcccggtg
atgttctccaccttcctgatgtgggtcctcgccgatttgttcacgacgttgccggaggtc
ggcgacctggacaagccgaagctggtgttcttcttcgacgaggcgcacctgctgttcacc
gacgcctccaaggcgttcctcgagcaggtggagcagacggtcaagctgatccggtccaag
ggcgtcggggtcttcttctgcacgcagatgcccaccgacgtgccgaaggaggtactcagc
cagctcggcgcccgcatccagcacgccctgcgcgccttcacccccgacgatcagaaggcg
ctgacgaagacggtgcgcacttaccccaagaccggggtctacgacctggagtccgcgctg
acgtcgctcggcatcggcgaggcggtggtcaccgtgctctccgagaacggcgtgccgacg
ccggtggcgtggacgcggatgcgcgcaccgcgctcgctgatggacacgatcgggcctgag
gcgatcacggcggcagcgaaggccagcccgctgcaggcgcagtacgggcagacggtcgac
cgcgactcggcctacgagcggctggccgccaagttggcgccccctgcagcgccggtgccg
ccttcggcgccggcaccgccgcgcgtggaggtgcctccgccgctggaggtgccgccgatg
cccgcgccggcccccgagacgggattcttcgacaagatgatggagagcccggcgttcaag
agcgcgatgcgatcggcgggcaccgtgatcggccgcgagatcacccgcagcctcttcggc
accggccggcgcaggcgccgctga
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